Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0580 ATGCCTGCATTTAACACTTCATCATTTTGTGGTGAAAACCGAACAGTGTGTGTCACTGGGGCTAGTGGGTTCATAGCTTCTTGGATTGTCAAATTTCTGTTGCAGAAAGGCTACACTGTTAGAGGGACACTACGGAACCCAGATGATCCGAAGAACGGACACTTGAAAGAGATGGAAGAAGGGAAGGATAGACTAACACTTCATAAAGTTGATATTCTTGATATTCACTCTCTTAAACCTGTTTTTCATGGTTGTGATGCTGTGTTTCACACTGCCTCTCCTATCACTGATAACCCTGAAGAGATGTTAGTACCAGCAGTGAATGGAAGCAAGAATGTTATAATAGCAGCTGCAGAAGCAAAAGTGCGGCGCGTGGTATTCACTTCATCAATTGGTGCTGTGTATATGGACCCTACAAGGAATAGAGATTTGGTGGTTGATGAATCATGTTGGAGTGATTTGGAATACTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGGTAATGGCTGAACAAACAGCGTGGGATATAGCTAAAGAGAAAGGTGTGGATTTGGTTGTGGTGAACCCAAGTTTGGTTATTGGACCATTACTTCAAAGCACCATCAATGCTAGCACAATTCATATCTTAAAGTACCTCACTGGTTCAGCTAAGACTTATGTTAATGCCACTCAATCTTATGTGCATGTTAAGGATGTTGCACTTGCGCACATTCTTGTTTATGAGACACCCTCTTCTTCTGGTAGATATATATGTTCTGAAAGTTCATTGCATCGTGGTGAGCTAGTCGAAATTCTGGCCAAGTTTTTCCCTGAATACCCAATTCCTACCAAGTGTTCAGATGAAAAGAATCCAAGGGTAAAACCCTATATCTTTTCAAATCAAAAGCTGAAGGATTTGGGATTGGAGTTCACCCCAGTGAAGCAATCTCTATATGAAACTGTTAGGAGCCTACAAGACAAAGGCCACCTTCCTATTCCTATAGGGCAAGAAGACTATGAAAGTTAA 1011 0.4105 MPAFNTSSFCGENRTVCVTGASGFIASWIVKFLLQKGYTVRGTLRNPDDPKNGHLKEMEEGKDRLTLHKVDILDIHSLKPVFHGCDAVFHTASPITDNPEEMLVPAVNGSKNVIIAAAEAKVRRVVFTSSIGAVYMDPTRNRDLVVDESCWSDLEYCKNTKNWYCYGKVMAEQTAWDIAKEKGVDLVVVNPSLVIGPLLQSTINASTIHILKYLTGSAKTYVNATQSYVHVKDVALAHILVYETPSSSGRYICSESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQSLYETVRSLQDKGHLPIPIGQEDYES* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0580 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 329 - -
Lan9g0580 336 Pfam NAD dependent epimerase/dehydratase family 16 247 IPR001509 -
Lan9g0580 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 329 - -
Lan9g0580 336 CDD FR_SDR_e 16 303 - -
Lan9g0580 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 319 IPR036291 -
Lan9g0580 336 Gene3D - 13 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0580 Lan-Chr9 8528927 8533600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0580 12 279 Monolignol Biosynthesis Gene Families AT1G80820 71.269 2.94e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0580 K09753 - gmx:100799994 565.844