Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0577 ATGACTATTCCAACCACCGATGTTGATGTTAACGCCGTCGATGAATTCACCGTAACTATCAACTCCGGCAGGCCCTCTCACACCGACGACAACAACCACCGTCAAGATCAACATAACCAAGATAGCGATGATGATGATGAAGTTGTGGATCCTAATGATCCTTTTGATATTACTCAAACTAAGAATGCTCCTATCGACACTCTTCGCCGTTGGAGACAAGCAGCACTGGTGCTCAATGCGTCCAGGCGTTTTAGATATACACTGGACTTGAAAAAGGAAGAGGAGAAAGACAAAAAGATTAGATTGATTAGAGCCCATGCACAAGTCGTCAGAGCAGCATTGCTTTTCAGATTGGCCGGTGAACGGGAACTAGTAATAAATACAGCAGTGACACCCCTACCTCAAGCTGATGGTGACTATGCAGTTGGGCTTGAGCAACTTACTTCAATGTCTAAGGATCAGAATGTTTCTGCTTTACAACAATATGGAGGGGTTAAAGGCTTATCTAATTTACTAAAGTCAAATCCGGAGAAAGGAATCAGTGGAGATGAAGCTGATCTATCAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTCTGGAGGTTTCTATGGGAAGCCTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTAGTATCACTGGTACTTGGAATAAAAACAGAGGGTTTGGAAGAAGGATGGTATGATGGGGGAAGTATTGCTTTTGCAGTTATTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTAAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTCATTAGAGGTGGCAGAACAATTAAAATATCGATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTGTTAATCACCTGTCATTCACTTGCTATTGACGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAATCACCCTTTCTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGCGTTATGCTGGTAACCAGCGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCATTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGTCTTAGTGTTGCTGTTTTAGTGCTTGCAGTCCTCTTGGGCAGATTCTTTTCTGGCAATACGAAAGACTTAGATGGAAATATACAATTCACTGCTGGAAAGACTAGTATTAGTGATGCAGTAGATGGGGTGATCAAAATTTTTACCATGGCTGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTTTACCTTTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCTTTGGTACGAAGACTGTCAGCCTGCGAAACTATGGGCTCTGCTACAACGATTTGCAGTGATAAGACAGGAACTTTGACCTTAAATCAGATGACGGTAGTCGAGGCATATGCTGGGAGGAAGAAGTTAAACCCAGTGGATGACTCATCAAAGTTGCATCCAGAAGTTTTATCTCTGATAAATGAGGGCATTGCGCAGAATTCAACTGGAAATGTTTTTGTACCCAAGGATGGTGGAGAGACAGAGGTGACAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATCGTACCAGATCAAATACGACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTCGCTCTGAAGCTGGTGGACTCAGGAGTGCATATTCATTGGAAAGGAGCTGCAGAGATTGTGCTAAATGCATGTACTCAGTATCTTGATTCAAATGGTGACTTGCAATCCATTGAAGAAGAGAAGGCATTTTTTGGGGAGGCAATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGTCATTGCATACAGATCATATGAATTAGAAAAAGTTCCATCTAATGAGGAGGAGTTAGACCACTGGTCCTTACCAGAAGAAGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGAGTATGCACTGAAGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAGACAGCAAAGGCAATAGCTTTGGAGTGTGGGATTCTGGCTTCAACTGAAGATGCAATTGAGCCAAATATAATTGAAGGAAAGAGGTTCCGTGAACTACCTGAAAAAGAAAGGGAACAGATTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCACTACGTAAAGGAGGTGAAGTCGTTGCTGTGACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGTCTGTTATGTTCCTTAG 2490 0.4249 MTIPTTDVDVNAVDEFTVTINSGRPSHTDDNNHRQDQHNQDSDDDDEVVDPNDPFDITQTKNAPIDTLRRWRQAALVLNASRRFRYTLDLKKEEEKDKKIRLIRAHAQVVRAALLFRLAGERELVINTAVTPLPQADGDYAVGLEQLTSMSKDQNVSALQQYGGVKGLSNLLKSNPEKGISGDEADLSKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVILVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITCHSLAIDESSMTGESKIVHKDHKSPFLMSGCKVADGVGVMLVTSVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRFFSGNTKDLDGNIQFTAGKTSISDAVDGVIKIFTMAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKLNPVDDSSKLHPEVLSLINEGIAQNSTGNVFVPKDGGETEVTGSPTEKAILSWAVKLGMNFDRTRSNTTVLHVFPFNSEKKRGGVALKLVDSGVHIHWKGAAEIVLNACTQYLDSNGDLQSIEEEKAFFGEAIDDMAARSLRCVVIAYRSYELEKVPSNEEELDHWSLPEEELVLLAIVGIKDPCRPGVKEAVRVCTEAGVKVRMVTGDNLQTAKAIALECGILASTEDAIEPNIIEGKRFRELPEKEREQIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEVCYVP* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0577 829 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 443 529 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan9g0577 829 Pfam haloacid dehalogenase-like hydrolase 502 824 - -
Lan9g0577 829 SFLD Haloacid Dehalogenase 487 824 - -
Lan9g0577 829 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Lan9g0577 829 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Lan9g0577 829 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Lan9g0577 829 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Lan9g0577 829 PRINTS P-type cation-transporting ATPase superfamily signature 812 829 - -
Lan9g0577 829 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 150 824 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lan9g0577 829 PANTHER CATION TRANSPORTING ATPASE 59 825 - -
Lan9g0577 829 Pfam E1-E2 ATPase 282 483 - -
Lan9g0577 829 MobiDBLite consensus disorder prediction 20 60 - -
Lan9g0577 829 Gene3D - 515 712 IPR023299 GO:0000166
Lan9g0577 829 Gene3D - 65 117 - -
Lan9g0577 829 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 59 825 - -
Lan9g0577 829 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 499 IPR023298 -
Lan9g0577 829 SUPERFAMILY HAD-like 493 824 IPR036412 -
Lan9g0577 829 Pfam Cation transporter/ATPase, N-terminus 163 230 IPR004014 -
Lan9g0577 829 Gene3D - 213 501 - -
Lan9g0577 829 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 717 IPR023299 GO:0000166
Lan9g0577 829 Pfam Ca2+-ATPase N terminal autoinhibitory domain 52 95 IPR024750 GO:0005516
Lan9g0577 829 Gene3D - 502 823 IPR023214 -
Lan9g0577 829 PRINTS Sodium/potassium-transporting ATPase signature 248 268 - -
Lan9g0577 829 PRINTS Sodium/potassium-transporting ATPase signature 498 519 - -
Lan9g0577 829 PRINTS Sodium/potassium-transporting ATPase signature 624 642 - -
Lan9g0577 829 SFLD p-type atpase 487 824 IPR044492 -
Lan9g0577 829 SUPERFAMILY Calcium ATPase, transduction domain A 283 378 IPR008250 -
Lan9g0577 829 SMART Cation_ATPase_N_a_2 161 235 IPR004014 -
Lan9g0577 829 MobiDBLite consensus disorder prediction 27 41 - -
Lan9g0577 829 Gene3D - 185 381 - -
Lan9g0577 829 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0577 Lan-Chr9 8431207 8440079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0577 18 824 Primary Pumps ATPases AT3G21180 74.597 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0577 K01537 - gmx:100777143 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0577 9 8431207 8440079 Lan9g0577 9 8431207 8440079 ECH