Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0562 ATGTGGCGTCAAAATACAAAGGCATCAGTAATTAGAAAAGGAAATGGAAATGGAAATGGAAATGGATTGGTAGCAGTTGCAGTAGATAAGGATAACAAAGGGAGCAGACATGCTCTCAAATGGGCTGCTGATAGTCTCCTTACCAGAGGACAAACCCTTCTCCTAATCCATGTTTTGCACACCAAGTCCCCACACGTTTCCTCATGCAGTGAAGGCATAATATGTAACACCAATAGTCCAGATGTATCTCCACACAGAGACCAACTTGTCAGTATTACAAAGGAACTCTTTCATACCTTTCATTGCTATTGTACACGCAAAGATATTCAATGCCTTGATGTCTTACTTGAAGACACTGACGTTGTGAAAGGAATAACAGAATATGTCTCTTACGCTGCAATTGAGAACTTGGTGCTTGGTGCAGCCTCAAGGCATGGCTTTATTAGATTCAAGTCATCAAGTAAACCAAGCAGCATAGCAAAAGGGGCACCAGATTTTTGTACAGTGTATATAATATCAAAGGGGAAGATATCTTCAGTCCGAAGTGCTTCTCGTGCAGCACCACATTCCTCCCCACTGCTGAAACATGTACAGAATCTAAATAATGAGAGCAATCATCCTAAGATAACCTCATCTAGACGTATGTCTGTGGGGTTCAGAGATCATCATAGGACATCCTTCAAGCCTCACAGTTGGCAGGATGAATCCATTAAGGTTGGAAAAAGAATAGGGTTGAGTGGAAGGTCATGCATGGATTACTCAGAATCTGAGACAGATATATCATTTATAAGCTCTGACAAGCCTAGCACTAGCAGTGGACGTTCATCATCTGTTTACTCTAACTACATTGATTCAGGCCGTAATTCACGAATTTCAACCACTTCAGATCATAGCTTGGGTACCGGCTTCATGTTCAATGACCATAACTCACCAGATCTTTCATTTTCTAAGGAAAGCAAAAGAATATCATCTTCATATTCAAATAAGAACATGGATGAAGAAGTTGGTATGAGGAGGTCTGGGCTTGAGTTAAAGCAAATGATTGAAATGTATGGTGCCGCACGCAAAGAAGCACTAACAGCCGGACAAAAGTTAATGGAACTTAACCACCAGAGAACCGAGGCAGAACAAAAAATAGATGAGACACGATTGTCCCAACAAGTATCCCTTGCAACCATAGAGAAAGAGAAAGCAATAAGTAAAACTACCTTGGAAAAAATTGATGCAGACACGAAAGTTTCAGAAATGGAAGCTCTTAAAGAAGCTGAGGAAATGAGGAAACTATTGAATAATGTAGTCCAAGCTGATGAAAGATATAAGAGATACACAATTGAGGAGATTGAAATAGCCACAGACTTCTTTTCTGAATCTCGAAAAATAGGGGAAGGGGGCTATGGCCCAGTCTATAAATGTTACCTTGATCACATTCCAGCAGCTGTAAAGGTTCTTCGTCCAGATTCTACTCAAGGGAAGTCACAGTTTCAGAAAGAGGTTGACATACTGAGCTGCATGCGCCATCCTAACATGGTGCTTCTTCTAGGAGCCTGTCCAGATCATAACATACTAATTTATGAGTATATGGAAAATGGAAGTTTAGAAGATTGTATGTTTCGAAAGAAGGACGAGAATCTGATGTCTTGGCAGGTCAGGTTTCATATTGCTGCAGAGATAGCCACGGGATTACTCTTCCTACATGAAACAAAGCCTGAACCATTAGTACATCGTGATCTGAAACCAAGCAATATACTACTAGACCACAATTATGTAAGTAAGATTAGTGATGTTGGATTGGCAAGGATTCTCCCTGTTGTAGCTGAAAATGTAACACAATGTCACATGACTTCAGCAGCTGGAACTTTTTGTTATATTGATCCAGAGTATCAACAAACAGGAACAATTGGTGTTAAATCTGATGTATATTCTCTAGGGATCATACTTCTTCAATTATTGACAGGTAAGACACCAATGGGTTTGGCTTACCAAGTTGGAGAGTCTATTGAGAATGACACATTTGTTGAAATGCTTGACAAATCTGTTCATGAGTGGCCTCTTCAAGAAACATTATGTCTTGCAAAGATGGCAGTTAAATGTGTAGAACTCAGACGAAAAGATAGACCAGACCTCGGTAAACAAGTCTTGCCAGAGCTCCAAAGACTCAGAGATTTTGCTGAAGATATCATGAGTCCAACAACAACATTTTTTGGTGAAGAAGATAGCAGTAGTGAATCTTCTCCTAATGCAAGTCAAGCTTCTATTCTATAA 2262 0.3992 MWRQNTKASVIRKGNGNGNGNGLVAVAVDKDNKGSRHALKWAADSLLTRGQTLLLIHVLHTKSPHVSSCSEGIICNTNSPDVSPHRDQLVSITKELFHTFHCYCTRKDIQCLDVLLEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRFKSSSKPSSIAKGAPDFCTVYIISKGKISSVRSASRAAPHSSPLLKHVQNLNNESNHPKITSSRRMSVGFRDHHRTSFKPHSWQDESIKVGKRIGLSGRSCMDYSESETDISFISSDKPSTSSGRSSSVYSNYIDSGRNSRISTTSDHSLGTGFMFNDHNSPDLSFSKESKRISSSYSNKNMDEEVGMRRSGLELKQMIEMYGAARKEALTAGQKLMELNHQRTEAEQKIDETRLSQQVSLATIEKEKAISKTTLEKIDADTKVSEMEALKEAEEMRKLLNNVVQADERYKRYTIEEIEIATDFFSESRKIGEGGYGPVYKCYLDHIPAAVKVLRPDSTQGKSQFQKEVDILSCMRHPNMVLLLGACPDHNILIYEYMENGSLEDCMFRKKDENLMSWQVRFHIAAEIATGLLFLHETKPEPLVHRDLKPSNILLDHNYVSKISDVGLARILPVVAENVTQCHMTSAAGTFCYIDPEYQQTGTIGVKSDVYSLGIILLQLLTGKTPMGLAYQVGESIENDTFVEMLDKSVHEWPLQETLCLAKMAVKCVELRRKDRPDLGKQVLPELQRLRDFAEDIMSPTTTFFGEEDSSSESSPNASQASIL* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0562 753 Gene3D Transferase(Phosphotransferase) domain 1 527 732 - -
Lan9g0562 753 PANTHER OS02G0152300 PROTEIN 19 750 - -
Lan9g0562 753 CDD STK_N 23 175 - -
Lan9g0562 753 Coils Coil 425 445 - -
Lan9g0562 753 PANTHER BNAA05G18880D PROTEIN 19 750 - -
Lan9g0562 753 SMART serkin_6 454 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0562 753 SUPERFAMILY Protein kinase-like (PK-like) 437 709 IPR011009 -
Lan9g0562 753 Coils Coil 365 385 - -
Lan9g0562 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Lan9g0562 753 Gene3D Phosphorylase Kinase; domain 1 425 526 - -
Lan9g0562 753 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 172 - -
Lan9g0562 753 MobiDBLite consensus disorder prediction 732 753 - -
Lan9g0562 753 Pfam Protein kinase domain 455 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0562 753 ProSiteProfiles Protein kinase domain profile. 454 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0562 753 MobiDBLite consensus disorder prediction 731 753 - -
Lan9g0562 753 Gene3D HUPs 7 172 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0562 Lan-Chr9 8321867 8326763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0562 13 752 Receptor kinase-like Gene Family AT1G78940 51.047 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan9g0562 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0562 - - lang:109357274 1432.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0562 9 8321867 8326763 Lan9g0562 9 8321867 8326763 ECH
Lan9g0562 9 8321867 8326763 Lan2g0552 2 7918138 7922926 LSH
Lan6g1814 6 29477077 29480165 Lan9g0562 9 8321867 8326763 PCT
Lan9g0562 9 8321867 8326763 Lan6g1814 6 29477077 29480165 PCT