Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0559 ATGTCCTCCTTTCTCATCCACCTTCTCTTCATCTTCTTTTTAGTCAACCCTTCCTTATCAACATGCCCCCTCAACACCACCGTCCTCACCGTCGTAGGTGGTGGTTCAAGACCCTCCTTCGACACTGGCACTGAGTGCCACTACGTCCTCCAAGCCCTCCACCTTGTCGAATCCGACTACCTCCGCCGCGAAGGCCTGTTCGTCCCACCCTCCACCGCCGCCGAGTCCTGCTGGACCTCCTTCCAATCCTTCATCGACAAGTACGAACCTAACTTGGATGTCCGCTCCTCGTGCGGCTTCCAAACCTCATGGATCTCAGAGGGATGCATGAACATAACCACCAGAAAAGAGTTCGAAGCACAAGTTCCTTCAACCGCCCTTCAATCTGTGCAGAACAATTGCAATCAGTCCCTTCTGAACAACGCCCCATGTGCCCTCTGCACAACCACCTTGTCCAACTTGCAATCCTATTTGACCGGGCCCACTGTTGGCAACGTCTCTGATTGCAGGGCTTATACCTCTATCTATGCTGCTTCTCTCTACGATCCCACCGACCCTGGTACTGCCAACTGCTTGTTCGGCCTTCAATTTTCCACTTCATCTTCCCATTCTAAAACTAGAACCATCGTTATTGTTCTCGTTTCCGTTCTTTTTGCTTTGTTCGCTGTTGCTGCTTTTTTGGGTTACTTGAGATTCAAGAATAAAAAGAACAACAAAAAGGGTAGTATGAATATAACTGAAACAGGTCAAAGTTCTAGGTTGGATTCCATGAGTCAGAGTACCACTTTGATTAGATTCACCTTTGATGAAATTAAGAAGGCAACTAGGAACTTCTCAAGGGATAATATAGTTGGGAGTGGTGGTTATGGTAATGTTTATAAAGGCTTGCTCTTAGATGGGACTCAAGTTGCCTTCAAGAGGTTCAAGAATTGTTCCGTTGCTGGGGATGCCAGCTTCACTCATGAAGTTGAGGTTATTGCAAGTGTTAGGCATGTCAACCTTGTTACTTTGAGAGGCTATTGCACTGCTACCACTAAATTTGAAGGTCACCAGAGGATTATTGTTACTGATTTGATGGAAAACGGGAGTCTTCATGATCATTTGTTTGGTTCCTCCACCCAGAAACTCACTTGGCCAATGCGTCAAAAGATTGCTCTAGGCACCGCTCGGGGGTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATCCATAGGGATATTAAAGCCAGTAACATACTTCTTGATGACAAGTTTGAGGCCAAGGTAGCAGACTTTGGACTAGCAAAGTTCAATCCGGAGGGAATGACACATATGAGTACTAGAGTGGCTGGAACAATGGGGTATGTTGCTCCCGAGTATGCTTTGTATGGCCAGTTGACAGAGAGAAGTGATGTCTTTAGTTTCGGGGTTGTGCTTCTTGAGCTTTTAAGTGGGAAGAAGGCTCTTAAAACGGATAATGATGGCCAACTGACCGCCCTAACTGATTTTGCTTGGTCGTTAGTTAAAAACGGTAGAGCTTTGGATGTTATTGAAGATGATATGCCTGAACCAGGTCCACCACAAGTCCTTGAGAAGTATGTGCTGGTTGCTGTACTATGCTCTCATACACAGTTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTAGAGACAGATGAATCAGTACCCTCAATACTAGAACGCCCAATTCCTTTCATTGCTGACAGGATTGTTATTGAGAAATCTGTCAACAGTAACTCGGGACAGTTGTCCAGTCCAACTGGCTATCAAGCATATACATTACAGAATTGCCGCCTGTCTAATTCAAGGGAAGAAGAAGGAAGCTTGGAGTCTGGGACTGTGAGCACCGAAACTGGATTGTCTTCCACGACCTAG 1884 0.4591 MSSFLIHLLFIFFLVNPSLSTCPLNTTVLTVVGGGSRPSFDTGTECHYVLQALHLVESDYLRREGLFVPPSTAAESCWTSFQSFIDKYEPNLDVRSSCGFQTSWISEGCMNITTRKEFEAQVPSTALQSVQNNCNQSLLNNAPCALCTTTLSNLQSYLTGPTVGNVSDCRAYTSIYAASLYDPTDPGTANCLFGLQFSTSSSHSKTRTIVIVLVSVLFALFAVAAFLGYLRFKNKKNNKKGSMNITETGQSSRLDSMSQSTTLIRFTFDEIKKATRNFSRDNIVGSGGYGNVYKGLLLDGTQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTKFEGHQRIIVTDLMENGSLHDHLFGSSTQKLTWPMRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALKTDNDGQLTALTDFAWSLVKNGRALDVIEDDMPEPGPPQVLEKYVLVAVLCSHTQLYARPTMDQVVKMLETDESVPSILERPIPFIADRIVIEKSVNSNSGQLSSPTGYQAYTLQNCRLSNSREEEGSLESGTVSTETGLSSTT* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0559 627 Gene3D Phosphorylase Kinase; domain 1 238 357 - -
Lan9g0559 627 PANTHER OS01G0253100 PROTEIN 19 605 IPR045271 GO:0004714|GO:0006468
Lan9g0559 627 CDD STKc_IRAK 284 553 - -
Lan9g0559 627 MobiDBLite consensus disorder prediction 603 627 - -
Lan9g0559 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lan9g0559 627 ProSiteProfiles Protein kinase domain profile. 278 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0559 627 SMART serkin_6 278 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0559 627 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Lan9g0559 627 Gene3D Transferase(Phosphotransferase) domain 1 359 561 - -
Lan9g0559 627 SUPERFAMILY Protein kinase-like (PK-like) 252 553 IPR011009 -
Lan9g0559 627 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 19 605 - -
Lan9g0559 627 Pfam Protein tyrosine and serine/threonine kinase 281 552 IPR001245 GO:0004672|GO:0006468
Lan9g0559 627 Pfam SPARK 18 169 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0559 Lan-Chr9 8261592 8263679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0559 4 597 Receptor kinase-like Gene Family AT2G48010 61.944 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lan9g0559 PK_Tyr_Ser-Thr 3.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0559 - - gmx:100786298 905.205