Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0548 ATGAGTTGTAGCCCATGGACTTGCATCCCTAACTATGTTGAGTATCTAGCTCAATCTTCCTCCTCAACTTATCTTCCAAAGGATACAAGTGAAGCCATCACTGCCTGCAATTATTATCATCCAACACTTGCTACCATAAACAATGTTAATGAGGTCAATGCAACTGATAGAAACTTCTTTTATAACAACATTGGAAAACACTGTGCTTTTAAAACACCTCATTATTCTTCTACTCAAGTTGACATTAGCAAGGTGGGGTTTTGGAGGACTGATGAAGGCAAAGAGGCACACCAGGAAGCAAATCAATATGGAAGTACTAAACATCATCATCTTTTCTATGCTGATAGTCATGCCTCATGGACAGAAGAATCAGTTGGAGATAAGCATAATGTTTCACAGCTTGATCCAAGGGTAATGGTTGGTGAACCTGCTTTACTTCCCAAAAAACAGAAAACATATGCTGTTGACCGTTTACGCAGGCAACGTATTGCTGATAATCTCAAAGCCTTACACGAATTGCTTCCAATTCCAGCTGAGCGTGGTCAAGCCTATGTGCTGGACGACATCATTGACTATGTCAAATATTTGCAGCTTCAAATTAAGGAAATAAGTGGAACTAGATTGCAAACTGAACCAACTTCTATACCATTCATTTTTCACGAGGGCTATGGACATTATATAGAGAAACAAATGCTGAATGAACCCCTTGAGGAGATGATGGGGAAACTACTTGAGGAAAATCCAGCAGCAGCAACTCAGCTTCTGGAGAGTAAGGGTCTTTTCCTTATGCCTATAACTTTGGTTGAAGACTTGGGTGAAGCTATGCAAATGCTTGGGGGGAATGCACTTCTTTGA 855 0.4035 MSCSPWTCIPNYVEYLAQSSSSTYLPKDTSEAITACNYYHPTLATINNVNEVNATDRNFFYNNIGKHCAFKTPHYSSTQVDISKVGFWRTDEGKEAHQEANQYGSTKHHHLFYADSHASWTEESVGDKHNVSQLDPRVMVGEPALLPKKQKTYAVDRLRRQRIADNLKALHELLPIPAERGQAYVLDDIIDYVKYLQLQIKEISGTRLQTEPTSIPFIFHEGYGHYIEKQMLNEPLEEMMGKLLEENPAAATQLLESKGLFLMPITLVEDLGEAMQMLGGNALL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0548 284 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 10 268 - -
Lan9g0548 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Lan9g0548 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 209 IPR036638 GO:0046983
Lan9g0548 284 CDD bHLH_AtbHLH_like 157 204 IPR045239 -
Lan9g0548 284 Gene3D - 147 214 IPR036638 GO:0046983
Lan9g0548 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0548 Lan-Chr9 8195615 8197769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0548 155 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 40.164 7.44e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0548 - - lang:109356361 584.334