Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0531 ATGGGCAACACTGACACTGGGTACCCTTCATCAAGGGTAGCTATCCCTCCACCTCAACCTTTCTTGAAGTCTCTGAAATACTCTCTCAAAGAGACTTTCTTCCCTGATGACCCATTGAAACAGTTCAAGAACCAGCCAGCTTCAAAGAGGTTAGTGCTTGGCCTTCAATATTTCTTCCCTATATTCAAATGGGGCCCACAATACACAATGAAGTTCTTGAAATCAGACATCATTGCTGGAATCACCATAGCTAGTTTGGCTATTCCTCAAGGCATTAGTTATGCCAAGCTTGGTAACCTTCCTCCCATTCTTGGTCTTTATTCGAGCTTTATACCACCATTGATTTATGCAATGATGGGTAGCTCAAGGGATTTGGCAGTGGGAACAGTAGCAGTTGGATCACTTCTCATGGCTTCAATGTTGGGGCGTGAGGTTAATCCAAAAGAGAATCCAAAGCTTTTTCTCCACCTTGCTTTCACTGCTACATTCTTTGCTGGATTCTTCCAAGCATCACTTGGTCTATTTAGGCTAGGGTTTATCGTGGATTTTCTGTCACATGCAGCTATAGTAGGGTTCATGGGAGGAGCAGCCACTGTGGTTTGTCTACAACAACTGAAAGCTATTTTTGGACTCGAACATTTCACTCACGAAGCTGATGTTGTATCAGTAATGCGATCTGTTTTTACTCAAACTCATCAGTGGAGGTGGGAAAGCACTGTGTTAGGATGCTGCTTTATTTTCTTCCTCATGGTCACAAGATATTTCAGCAAACGGCAAGCAAGGTTGTTCTGGGTGTCAGCAATGGCACCTTTAACATCTGTTATATTGGGAAGCTTGTTGGTTTATTTTACTCATGCTGAGAAACATGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGACTAAATCCAGTTTCAGTGAGAGATTTGGTATTTGTGTCACCTTATATGACCACAGCCATCAAAACTGGTCTTATCACTGGCATTATTGCCCTAGCTGAGGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAGAATTACCATATTGATGGCAACAAAGAAATGATTGCTTTTGGAACCATGAACATAATTGGTTCCTTTACCTCTTGTTACCTTACAACAGGACCATTCTCGCGATCAGCTGTGAACTACAATGCCGGGTGCAAAACTGCAGCATCAAACATTGTAATGGCAATTGCAGTGATGCTGACATTGCTATTCTTGACACCATTGTTCCATTACACTCCATTGGTGGTTCTAGCATCAATAATTGTATCTGCAATGCTTGGACTCATAGATTATGAAGCAGCCATTCATTTATGGAAAATTGACAAATTTGATTTCCTAGTGTGTATCAGTGCATATATGGGAGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGTAATATCTGTACTTAGAGTACTTTTATTTGTTGCTAGACCAAGGACATTTGTTTTAGGCAACATTCCAAATTCTGGAGTGTACAGAAATGTGGAACAGTATCCAAATGCAAACCATGTTCCAGGAATCCTAATTCTTGAAATTGATGCTCCAATTTACTTTGCTAATGCAAGCTATTTAAGAGAGAGGATCCTAAGATGGATTGATGAAGAGGAAGACAACATTAAAGCTACAGGGAAGACCAGTTTGCATTATGTTATAATGGATATGACTGCTGTTGGGAACATTGATGCAAGTGGTATAAGCATGCTTGAAGAAATCAAGAAGATTATTGATAGAAGAGGACTACAACTTGTTTTGGTAAACCCTGGAAGTGAGGTGATGAAGAAACTCCACAAAGCCAAGTTCATTGAAGAAATAGGGCATAAATGGATTTACCTTACAGTTGAAGAAGCTGTTGGAGCATGCAACTTCATGCTCCACACACACAAACCAAACCACACAAAAGATGAACCAGAAGGTTGGAACAATGTCTGA 1950 0.4062 MGNTDTGYPSSRVAIPPPQPFLKSLKYSLKETFFPDDPLKQFKNQPASKRLVLGLQYFFPIFKWGPQYTMKFLKSDIIAGITIASLAIPQGISYAKLGNLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPKENPKLFLHLAFTATFFAGFFQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKAIFGLEHFTHEADVVSVMRSVFTQTHQWRWESTVLGCCFIFFLMVTRYFSKRQARLFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPVSVRDLVFVSPYMTTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNIIGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLASIIVSAMLGLIDYEAAIHLWKIDKFDFLVCISAYMGVVFGSVEIGLVIAVVISVLRVLLFVARPRTFVLGNIPNSGVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERILRWIDEEEDNIKATGKTSLHYVIMDMTAVGNIDASGISMLEEIKKIIDRRGLQLVLVNPGSEVMKKLHKAKFIEEIGHKWIYLTVEEAVGACNFMLHTHKPNHTKDEPEGWNNV* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0531 649 PANTHER SLC26A/SULP TRANSPORTER-RELATED 12 647 - -
Lan9g0531 649 Gene3D STAS domain 484 629 IPR036513 -
Lan9g0531 649 Pfam STAS domain 505 623 IPR002645 -
Lan9g0531 649 CDD STAS_SulP_like_sulfate_transporter 505 620 - -
Lan9g0531 649 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Lan9g0531 649 ProSiteProfiles STAS domain profile. 504 627 IPR002645 -
Lan9g0531 649 Pfam Sulfate permease family 73 453 IPR011547 GO:0016021
Lan9g0531 649 PANTHER SULFATE TRANSPORTER 12 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g0531 649 SUPERFAMILY SpoIIaa-like 506 627 IPR036513 -
Lan9g0531 649 TIGRFAM sulP: sulfate permease 60 623 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0531 Lan-Chr9 8121593 8127312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0531 12 649 Inorganic Solute Cotransporters AT4G02700 68.545 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0531 K17471 - gmx:100791091 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0531 9 8121593 8127312 Lan5g1263 5 26310086 26320578 LSH
Lan9g0531 9 8121593 8127312 Lan20g0180 20 1171069 1185476 PCT
Lan20g0180 20 1171069 1185476 Lan9g0531 9 8121593 8127312 PCT