Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0530 ATGCGGTTATGCCCCATGAGGACTTTCTTCACTGCTGATTCGTGTAAAGAATCAAATCCTAGTGCTCTAAATCCACAATCATGGCTTCAAATAGAAAGAGGGAAACTTCCCAAGTTGTCATCACAATCCTCTTCTGCATCGATAGAGTCTCTGATCAAGGTTGCACAGCCACCTATACTACCATTCTTTAAACCTATTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAACTTGAATCATGTGTTCCACAAGAGCGGTCGAATCTGTTGTTGTTACAATACCAGGTCTTTAGGGGCCTCGGCGAAGTTAAATTGATGCAAAGAAGCCTCCGGGCAGCGTGGCAGAGAGCCGATACGGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAATATGAAAAGCAAGGGGAAGAGTTAATAGCTGAATTGCTGAGGAGTTGCGGTAAATGTGCACAAGAGTTTGAGCCCATAGATGTAGCATCTAATCTTTCATTTGGTGTAAATTTAAGTTCCCAGGAGAGAATTTTGATAAATGGGAGCCACATTTCACAAGATGTTATTTTCACAATCGGAAATGAGAAGATAATTTGTGATAGACAAAAGATTTCTGAACTTTCGGAACCATTTCATGCAATGCTGAAGGGATATTTCAGTGAATCACATTCTGAGAGTATAGACTTGTCTGAAAACAATATTTCTCCTTCGGGTATGAGAGCGATAAGTTATTTCAGTTTGACCGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTGTTGGAAATATTAGTTTTTGCAAACAAGTATTGTTGTGAAAGACTCAAAGATGCCTGTGATAGAAGACTCGCTTCTTTAGTTTCATCTAAAGAAGATGCTTTGGAGCTCATGGAATATGCTCTAGATGAGAATTCATTTGTCCTTGCTGCAACCTGTTTACAAGTCCTTTTACGTGATCTTCCGAACTGTTTGAATGATAACCGGGTCGTGGAGATATTTATACACACTAATAGGCAGCAACTCGAAGTCATGGTTGGACCAAATTCATTTTCTCTTTTTTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACCACAGCTCATTTCCTGGAACGGCTAGTTGATTTTGCTGAAAATGACAAGCAAAGACTTCTGGCTTTTCATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGACGAGGCTCGTTGTCTTTTCAAGGACGCTGTAAATGCAGGGCATGTTTATTCGGTTGCAGGTTTAGCGAGACTAGACTACATAAAGGGTGAGAAGCTTTTACCTTATGAGAAACTCAGCTCAGTTATATCATCTGCTACTCCACTCGGATGGATGTACCAGGAAAGATCACTATATTGTGACGACGAGACAAGATGGAAGGACCTTGAGAAAGCGATTGATCTGGACCCGACTCTTATATATCCTTACATGTACAGGGCTGCGTCATTCATTAAGACACATGATGCTCAAGATGCACTGGCCGAAATCAATCGGATTCTCGGTTTCAAACTTTCGTTAGAATGCTTGGAACTACGATTTTTAATCTACCTGACTCTTGAGGACTACAAAGCAGCTCTATATGATGTTCAAACGATTCTCACTCTTTGTCCGGATTATAGAGTGTTTGAGGGGCGCGTTGCTGCTTCCCAACTCTGTACTCTTGTGCGCGAGCATGTTGAACATTGGACAACGGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCCGTTGATGATATTGGTTCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCGGCCAAAGGTGTTCTATACTTCAGACAGTCACTGCTTCTCCTGAGGTTGAGCTGTCCCGAGGCAGCAATGCGCAGTTTACAATTAGCTCGGCAACATGCATCAACTGAGCATGAACGACTCGTATATGAGGGATGGATCTTGTATGATACAGGTTATTATGATGAAGGGCTCCGGAAAGCTGAAGAGTCTATCAGTATGAAGAGGTCTTTTGAGGCTTTTTTCCTGAAGGCTTATGCACTGGCTGACTCTAGTCTAGATTCATCATGTTCTTCAACTGTTATTATGCTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCATTGAACAATCTTGGAAGTGTTCTCGTTGACTGTGGAAAGTTGGACTCAGCAGCCAATTGCTATATCAATGCGCTTAACATCCAACACACGCGAGCCCATCAGGGTCTCGCTCGTGTTCATTGTCTTAAGAACGACAAGGTTACTGCTTACAAGGAAATGACTGAGCTTATTCAGAAGGCAAAAAACAATGCATCTGCATATGAGAAGAGATCTGAGTACTGTGATCGTGAGCTTGCAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTCCGGGTGTATCCTTATAGATACCGTGCTGCAGTATTGATGGACAATCATAAGGAAGAGGAAGCCATTGCAGAACTCTCTAAAGCTATAGCATTCAAAGCTGATTTGCATCTCTTGCATCTACGTGCGGCATTTCATGAACACAAAGGGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCCGCACTCTCAGTGGATCCAAACCACCAAGAAATGTTGGAACTTCACAGCCGAGTTAATAGTCACGAGCCATGA 2679 0.4207 MRLCPMRTFFTADSCKESNPSALNPQSWLQIERGKLPKLSSQSSSASIESLIKVAQPPILPFFKPIDYVEVLAQIHEELESCVPQERSNLLLLQYQVFRGLGEVKLMQRSLRAAWQRADTVHEKIIFGAWLKYEKQGEELIAELLRSCGKCAQEFEPIDVASNLSFGVNLSSQERILINGSHISQDVIFTIGNEKIICDRQKISELSEPFHAMLKGYFSESHSESIDLSENNISPSGMRAISYFSLTGSLIEVPPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDALELMEYALDENSFVLAATCLQVLLRDLPNCLNDNRVVEIFIHTNRQQLEVMVGPNSFSLFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLLRKEYDEARCLFKDAVNAGHVYSVAGLARLDYIKGEKLLPYEKLSSVISSATPLGWMYQERSLYCDDETRWKDLEKAIDLDPTLIYPYMYRAASFIKTHDAQDALAEINRILGFKLSLECLELRFLIYLTLEDYKAALYDVQTILTLCPDYRVFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLSCPEAAMRSLQLARQHASTEHERLVYEGWILYDTGYYDEGLRKAEESISMKRSFEAFFLKAYALADSSLDSSCSSTVIMLLEDALKCPSDNLRKGQALNNLGSVLVDCGKLDSAANCYINALNIQHTRAHQGLARVHCLKNDKVTAYKEMTELIQKAKNNASAYEKRSEYCDRELAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSKAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0530 892 Gene3D Tetratricopeptide repeat domain 604 777 IPR011990 GO:0005515
Lan9g0530 892 SUPERFAMILY POZ domain 183 281 IPR011333 -
Lan9g0530 892 Pfam BTB/POZ domain 185 281 IPR000210 GO:0005515
Lan9g0530 892 PANTHER ETO1-LIKE PROTEIN 1 6 892 - -
Lan9g0530 892 SUPERFAMILY TPR-like 700 883 IPR011990 GO:0005515
Lan9g0530 892 Gene3D Tetratricopeptide repeat domain 365 551 IPR011990 GO:0005515
Lan9g0530 892 PANTHER ETO1-RELATED 6 892 IPR044631 GO:0010105
Lan9g0530 892 SMART tpr_5 515 548 IPR019734 GO:0005515
Lan9g0530 892 SMART tpr_5 715 748 IPR019734 GO:0005515
Lan9g0530 892 SMART tpr_5 811 844 IPR019734 GO:0005515
Lan9g0530 892 SMART tpr_5 846 877 IPR019734 GO:0005515
Lan9g0530 892 Coils Coil 767 787 - -
Lan9g0530 892 SMART BTB_4 185 285 IPR000210 GO:0005515
Lan9g0530 892 SUPERFAMILY TPR-like 470 744 IPR011990 GO:0005515
Lan9g0530 892 Gene3D Potassium Channel Kv1.1; Chain A 177 324 IPR011333 -
Lan9g0530 892 Gene3D Tetratricopeptide repeat domain 791 891 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0530 Lan-Chr9 8104108 8109316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0530 716 879 Glycosyltransferase AT3G04240 27.011 4.54e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan9g0530 BTB 3.7e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0530 - - aprc:113861325 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0530 9 8104108 8109316 Lan9g0530 9 8104108 8109316 PCT