Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0524 ATGGGTCAAGTAAGGGATCCTCAAGTGTTTTTAGATGTCTCAATTGATGGGGGCCCTGTGGAAAGAATTGTTATCCAGCTTTTTGCCAGTACAGTTCCTAAGACAGCAGAGAATTTCCGGGCACTCTGCACAGGTGAGAAAGGCATTGGGGAATCAACTAGGAAACCTTTGCATTATAAAGGAACAAGTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAAGGGCAATGGTACTGGGGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTTACACATGATGGACCTGGTTTTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGGTCTCAGTTCTTTATTATCTTCAAGCGCCAGCCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCCTGGGAATTGACGTTCTAAAGAAAATTGAGCTGGTGGGAACGTCTGATGGGAAGCCTATCCACCCAGTTAAAATTACTGATTGTGGTGAAATATCTGAAACAAAAATTCAGCATATAGTTGAGAAGGAAAAAGGGAAACAGAGGAAATCAGAAAAACCTCTTACTTCTGATGATAGTTCTGACAAAAAAACAAGGGGAAAAAGACAAAAATCTTCCAGGGTTGTGAGGAAAAGGAGGAGACACTCAACATCTGATAGTGACAGTGATAGCGGTAGTGATAGTTACTCCTCAGATTCTGAGTCAGATTCAGCTTCGGGTTCTGAATCAGATTCGAGTTCCTCTAGTTATGGGAAACCCCGGAAAAGGAAAAGAAATAAGCGCACAAACAGGAAAAAGAAGAAATATGGGCGAAAGAGAAGCCAGCACAGTAGAAATAGAAGATCAAGACACAAGTCCAGAAGGAGTTCGGAGAGTTCAAGTGATTCAGAAAGTGAGAGTTCTGATGCTAGTAGCAGTAGTTCTGATGATGAGAAAGCTAAACGTCATGACTCTCGTCACACAGGAAAGCAATCTTCTAACCCTCCCCCACAAAGTCAAACTATTCCAGAAAGTGTCGATCCCAAGGTTAGAGAAACTGTAGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGCATTTAACAATAATGGGCATGATACTGAAGCCAAGTTTATTAAACCTTCTAAGCAAAGCACTTATTCAGATGATTCAGATCATAACAGAGGTGCAAGTCCTGCTAGGAAGTTTGATGACTCAAACCAAGGACATGCCTTATTGTCCAGTCCTGTCCGCAAAGTATCTGAACCTGCTGCTGCCACAAAACCTAGTCAGGACTTTTCAAAAAGTCCTTCACCAAACGGCACGCCGAAGCGTATCAAAAAAGGACGCGGCTTTACTGAGCGCTTTGCATTTGCACGAAGATACCGTACACCATCTCCAGAACGATCTCCCCGTCCATATCGTTACGGTGATAGAAATATAAGGAGGAACTTTGATAGAAATACGAGCTACAGAAGTTATTCTGAGCGCTCACCACCAAGACGTTTTCGAAGCCCACCTAGGGGCAGGGGCCGTCCAAGCTACCAAAGCAGGAGAAGCCGAAGTAGGAGCATCTCCCATAGTCCAGTGCGTGGCCGATTTAGAGACCGTGAACGCAGCCGGAGTCCAAAGCGCAGTCTTAGTCCAGAAGACAGGCGGCCTCCTATAAGTGACAGACTAAAATCTCGACTTGGTCCTCAGAGCGAGAGACAGTCTCCAGTCAAAAGAAGATCAAGGTCCAATTCCAGGAGCAATGGCTCTCCGCCCTCCAGATCCCCAGACGTGACACTACAAAAGCGTTATGATAAAAGAACTTCTGTATCTCGTAGCAGGTCAAGATCCAGTTCTCCATCTGGGCAAAAGGGTTTAGTTTCTTATGGAGATGCCAGTCCTGATTCTGGTGGGAGGTAG 1932 0.4384 MGQVRDPQVFLDVSIDGGPVERIVIQLFASTVPKTAENFRALCTGEKGIGESTRKPLHYKGTSFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKLTHDGPGFLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVVLGIDVLKKIELVGTSDGKPIHPVKITDCGEISETKIQHIVEKEKGKQRKSEKPLTSDDSSDKKTRGKRQKSSRVVRKRRRHSTSDSDSDSGSDSYSSDSESDSASGSESDSSSSSYGKPRKRKRNKRTNRKKKKYGRKRSQHSRNRRSRHKSRRSSESSSDSESESSDASSSSSDDEKAKRHDSRHTGKQSSNPPPQSQTIPESVDPKVRETVDKQSHEEGELSPENGAFNNNGHDTEAKFIKPSKQSTYSDDSDHNRGASPARKFDDSNQGHALLSSPVRKVSEPAAATKPSQDFSKSPSPNGTPKRIKKGRGFTERFAFARRYRTPSPERSPRPYRYGDRNIRRNFDRNTSYRSYSERSPPRRFRSPPRGRGRPSYQSRRSRSRSISHSPVRGRFRDRERSRSPKRSLSPEDRRPPISDRLKSRLGPQSERQSPVKRRSRSNSRSNGSPPSRSPDVTLQKRYDKRTSVSRSRSRSSSPSGQKGLVSYGDASPDSGGR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0524 643 MobiDBLite consensus disorder prediction 315 332 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 333 349 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 536 583 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 351 366 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 454 497 - -
Lan9g0524 643 CDD cyclophilin_ABH_like 7 173 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 434 448 - -
Lan9g0524 643 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 SUPERFAMILY Cyclophilin-like 7 175 IPR029000 -
Lan9g0524 643 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 394 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 182 643 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 585 601 - -
Lan9g0524 643 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 MobiDBLite consensus disorder prediction 393 407 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 262 297 - -
Lan9g0524 643 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Lan9g0524 643 MobiDBLite consensus disorder prediction 232 258 - -
Lan9g0524 643 MobiDBLite consensus disorder prediction 182 209 - -
Lan9g0524 643 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lan9g0524 643 Gene3D - 2 182 IPR029000 -
Lan9g0524 643 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 5 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0524 Lan-Chr9 8059643 8065182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0524 25 171 U-box Gene Family AT5G67530 46.980 8.09e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0524 K09566 - gmx:100791082 714.531