Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0503 ATGGCTTCTTCAAATGGTAGTGGTTCACCTTGTGGAGCATGCAAGTTTCTAAGAAGAAAATGTGCATCTGATTGCATTTTTGCACCTTATTTTTGCTCAGAACAAGGAGCTACAAGATTTGCAGCAATACATAAAGTGTTTGGTGCAAGCAATGTTTCTAAAATGCTTATAAATATACCAGTTCATGATCGATGTGAAGCTGTTGTAACAATTGCTTATGAAGCTCAAGCTCGTGTTCATGATCCTATTTATGGCTGTGTTTCCCACATTTTTGCCCTACAACAACAGGTGGCATGCTTGCAAGCACAAATAATGCAAGTAAAAAATCACCTGGCTCAGAACATGGAGACTAATGAGTGGCCAGAGAATGTTTCAAGCCAACAAGGACAACCAATTAATCCATTTTATCACATGAATCCCATATCTCCTCAAAGCTCAATTGAATCAATTAATCATAGCATTAATATGAATATTGATGGAATGGTCATGCAAGATATTCAAAGCAGTGATGATTTTTCAATTCAAGCTTGTTCTAAGAAAAGATCATATAACAATGACTTGGGTGAGTTACAAGAAATAGCACTCAGGATGATGAGAAAGTAA 603 0.3648 MASSNGSGSPCGACKFLRRKCASDCIFAPYFCSEQGATRFAAIHKVFGASNVSKMLINIPVHDRCEAVVTIAYEAQARVHDPIYGCVSHIFALQQQVACLQAQIMQVKNHLAQNMETNEWPENVSSQQGQPINPFYHMNPISPQSSIESINHSINMNIDGMVMQDIQSSDDFSIQACSKKRSYNNDLGELQEIALRMMRK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0503 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 199 - -
Lan9g0503 200 ProSiteProfiles LOB domain profile. 9 111 IPR004883 -
Lan9g0503 200 Coils Coil 197 200 - -
Lan9g0503 200 Pfam Lateral organ boundaries (LOB) domain 10 108 IPR004883 -
Lan9g0503 200 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0503 Lan-Chr9 7834288 7836015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0503 2 199 AS2 family AT2G42430 51.639 5.61e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan9g0503 LOB 4.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0503 K13944 - gmx:100801508 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0503 9 7834288 7836015 Lan5g1250 5 26250831 26252137 LSH