Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0491 ATGGTGAACCATGAAATAATGAATAATAATGTTACACCTCAGAAGAACGATTCTAGTGAAGTAGCAATGCATGAGTGCAGTTTTTGCGGCAAGACTTTCAAGAATGGAAAAGCATTGGGTGGTCATAGAAGATCTCACTTTCAAGTTGCCAAGGTGAAATCTCTTATCTCAAATCTCTCGAAAACGAGTACCAGTAGTGATAATAATAAAAAGAAAGGTGTTTTTTATGACGATGATGGTAGCAACAATAATGATGATAATGGTAAGAAACATACTTGTTATCTTTGCAAGAAAGATTTTCCTTCGAGTCATTCGTTGTTCGGGCACATGAGAACTCACCCTGATAGGCCTTGGAGGGGTGTTAACCCTCCTATTCATTCTCATCATCATAATAGTAGTGTACACAATTCTTCGGATATTGAAGATGATTATGATGAAGTTGTTGTTGCACATGCTATTGATATGTCAAAGTCTTCTTCTCTACCAAGATGGCAAAAGACGGGTAAGAGAGGTCGAAAGAGTACTAGTGTTTATGATGCTGCTGAGAATCTTGTGCTTATGTCTTTGAGGTATAATCACTTTATTGCTGTTATGTCTATGGTGGTTGAGCCAAAGAGTCACCAATCTTCAATGATTCCATGCAACAGAAAGAATATTCATGAAACATCAACTAGTCAAAAACATGTTGCAAAGAAGATTAAATTCTACTTAAGTGATTCTTTGAAGTTGGGAAATAATATTAATGGCTGTGAAAGTTACAAGGTAAATAGAGGAGAAGGTAATTTAGTTCAATCTAAGGGTGAAAGAATCTTAGTGAATATTGATTCTGATGAGGAGATAGAGAATGATTCTGGAAGCATGAAGGTTGAAGAGGCAATACAAGATCATGTTGGTAATTTTGGTGAAAGGAAAAAGGTCATGAAATTGTTAGTGAAGAAACTAAAGGCTCCAAACGCCGAATCTGAAACTCAAAAGAAAGTGAATGGTTATGTATGTGATATTTGTTGGAAATCTTTTCCAACTTTCCAAGGTTTAAGGGGACATAGATCCATTCATAGTAAAGAGGATAATAATGTTATGGACATGGTTGAATCAGAGTCTTCAGATTATGCCATTGTTAATGATGCCACCCTGTGA 1137 0.3597 MVNHEIMNNNVTPQKNDSSEVAMHECSFCGKTFKNGKALGGHRRSHFQVAKVKSLISNLSKTSTSSDNNKKKGVFYDDDGSNNNDDNGKKHTCYLCKKDFPSSHSLFGHMRTHPDRPWRGVNPPIHSHHHNSSVHNSSDIEDDYDEVVVAHAIDMSKSSSLPRWQKTGKRGRKSTSVYDAAENLVLMSLRYNHFIAVMSMVVEPKSHQSSMIPCNRKNIHETSTSQKHVAKKIKFYLSDSLKLGNNINGCESYKVNRGEGNLVQSKGERILVNIDSDEEIENDSGSMKVEEAIQDHVGNFGERKKVMKLLVKKLKAPNAESETQKKVNGYVCDICWKSFPTFQGLRGHRSIHSKEDNNVMDMVESESSDYAIVNDATL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0491 378 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 46 IPR013087 -
Lan9g0491 378 MobiDBLite consensus disorder prediction 59 82 - -
Lan9g0491 378 SUPERFAMILY beta-beta-alpha zinc fingers 23 113 IPR036236 -
Lan9g0491 378 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Lan9g0491 378 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 16 367 - -
Lan9g0491 378 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 113 IPR013087 -
Lan9g0491 378 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 16 367 IPR044653 GO:0003700
Lan9g0491 378 SUPERFAMILY beta-beta-alpha zinc fingers 329 356 IPR036236 -
Lan9g0491 378 Pfam C2H2-type zinc finger 330 354 - -
Lan9g0491 378 Pfam C2H2-type zinc finger 91 115 - -
Lan9g0491 378 Pfam C2H2-type zinc finger 24 46 - -
Lan9g0491 378 Gene3D Classic Zinc Finger 21 113 - -
Lan9g0491 378 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Lan9g0491 378 SMART c2h2final6 24 46 IPR013087 -
Lan9g0491 378 SMART c2h2final6 330 352 IPR013087 -
Lan9g0491 378 SMART c2h2final6 91 113 IPR013087 -
Lan9g0491 378 ProSitePatterns Zinc finger C2H2 type domain signature. 332 352 IPR013087 -
Lan9g0491 378 ProSiteProfiles Zinc finger C2H2 type domain profile. 330 357 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0491 Lan-Chr9 7277645 7279324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0491 24 133 C2H2 Transcription Factor Family AT2G26940 38.596 6.32e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g0491 zf-C2H2_6 2.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0491 - - lang:109356992 736.102