Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0490 ATGAAATCTCCTTTCTCAAAAGCAAGTAGTAGTACTAATTACAATAAAGATAAGGCTGATTGTGACGATGATAGCAACAACAATGGTGATAATGACAAGAAACGCACTTGTTATCTTTGCAAGAAGGATTTTCCTTCGAGTCATTCATTGTTCGGGCACATGAGAATTCATTCTGATAGGCCTTGGAGGGGTGTTCGTCCTTCTATTCATTCTCATCATCATAATGATAAACACATTTCTTCTGGTTTTGAAGAAGATCATGATGATTACGATGATGAATATGATGAAGTTGTTGCATCTAATATTGATATATCAAAATCTTCTTCTCTACTAAGATGGCAAAAGACAGGTAAGAGAGGCAGAAAGAGTTCTAGTGTTTATCAAGCTGCTGAGATTCTTATGTATATGTCTTCGAGGAGTAATGACTTTCTTGATATTAAGTCTATGATGGGTGAGCCAAAGAATCATCAACCTTCAACAATTTCATGCAAGGGAAAGAATCTTTCGGAAGCATCAATTAGTGGGATAAAAAAGAATTTTGAAAGCATGAATGTTGAAGATGCAATTCATGATCATGTTCATAATTTTGATGAAAAAGAAATTAAGGTCATGAAACTTTTAGTGAAGAAACTAAAGGTTCCACTTCATAATAAGGAGAAGAATAATATTGTGGACATGGTTGAATCAAAGTCTTCATATTATGCCATTACTCAAGATGCCACCGTGAGAGGATCAACGGTGGAAGCAATCAATAATAATGAGGTCCAAACTGAAAAAGATGTATCATCAAGTCAATTTTTAGGTCCAAAATTTTTGGACTTTGATCTGAATATGTCACCTCCTCATGATGATCTAGATGATAGAGAAAATTGTTAA 876 0.3425 MKSPFSKASSSTNYNKDKADCDDDSNNNGDNDKKRTCYLCKKDFPSSHSLFGHMRIHSDRPWRGVRPSIHSHHHNDKHISSGFEEDHDDYDDEYDEVVASNIDISKSSSLLRWQKTGKRGRKSSSVYQAAEILMYMSSRSNDFLDIKSMMGEPKNHQPSTISCKGKNLSEASISGIKKNFESMNVEDAIHDHVHNFDEKEIKVMKLLVKKLKVPLHNKEKNNIVDMVESKSSYYAITQDATVRGSTVEAINNNEVQTEKDVSSSQFLGPKFLDFDLNMSPPHDDLDDRENC* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0490 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Lan9g0490 291 MobiDBLite consensus disorder prediction 1 15 - -
Lan9g0490 291 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Lan9g0490 291 SUPERFAMILY beta-beta-alpha zinc fingers 32 60 IPR036236 -
Lan9g0490 291 MobiDBLite consensus disorder prediction 16 34 - -
Lan9g0490 291 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 7 284 - -
Lan9g0490 291 MobiDBLite consensus disorder prediction 1 34 - -
Lan9g0490 291 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 7 284 IPR044653 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0490 Lan-Chr9 7273838 7274713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0490 30 75 C2H2 Transcription Factor Family AT2G26940 52.174 1.65e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g0490 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0490 - - lang:109356198 554.288