Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0484 ATGAAAACTTGTCATCAAAAGGCTCATGCTCTTATCTTTCACATAATCTTCATATCTTTGCTACCACATAAAATCACAGAAGCTTCAACAAGAACAGAAGCAGAAGCTCTTGTGAAATGGAAAAACAGTCTAACCCCTCCTCTTCCTTCTTCTCTAACATCATGGTCCTTCAACAACATTGACAACCTTTGTAGTTGGGGTGGCATTGTTTGTGACTCTACCAATACAACTGTCTCAGAGATAGACTTAAGAAGTTCCAAACTCAATGGAACAATATCTCACTTGAATTTTGGTTCCTTACTCAACCTCACTAGCCTCAACCTCTTTGGAAATAGTCTTGAAGGGTCAATTCCATCCACAATTGGTAAACTCTCCAAGCTCACTTTTCTAGACTTTGGAAATAACTCATTTGAAGGCACACTACCTTCTGAGCTAGGGCAACTAAAAGAGCTTCAATATCTTAGCTTTTGGAATAACAGTCTCAACAGTACTATTCCCTATGAGATCACAAATCTCCCTAAGGTAAGACACTTGCACCTTGGATATAACTTCTTTATATCTCCTTCTTCCTGGTCCAAATATTCAAGCATGCCTTTCTTAACTTACCTTAGTTTGTATGACAATCAATTCACCTATGAAATCCCAAGTTTCATAATGGAGTGTCAAAACTTAACATACCTTGACCTCTCTTGGAACAATTTCAATGGCACAATACCAGAATCTGTATATTCCAATCTAAGCAAACTTGAATACCTCAACCTCTCCTATTGTAAGCTAGAAGGAAAATTGTCACCCAACTTGTCCAAGCTTTCTAATCTCAAAGAACTTCATATAGCTTATAACAACTTCACTGGTCCTATTCCTTCCTCCTTAGGCCAACTTAGGGAGTTAAGTTATCTTGATCTCAGTCATAATATGTTGAACTCTACAATTCCATTTGAACTTGGCTTCTGTACAAAATTGAGGTACTTGAGTTTAACAAATAATGATCTCACTGGTCACTTGCCTTTATCACTATCCAATCTGACTAAAATATCAGAGTTGGCATTATCAGATAATTTCTTTTCTGGTGAAATTTCTGCTTCATTGGTCTCTAACTGGACTCAGTTGATCTCTCTGCAAGTCCAAAACAATAGTTTAAGAGGAGAGATTCCTCCGGAGATTGGCCTTTTGACAAAAATCGAAATACTCTTTCTGTTTCATAATACATTCTCTGGTCACATTCCTATAGAGATTGGAAACTTGAAAGAAATTATACAATTAGATCTTTCAAGTAACCATTTCTCCGGTCCAATTCCTCCAACCATTGGGAACCTTAGAAACATTACAAGATTGCATCTTCATGACAATGAGCTCTCGGGAACCATTTCAGCAAATATTGGAAACTTAACATCATTGAGTGTTTTTGATGTCAATAATAATAATTTGGATGGAGAGTTGCCAGAGACCATCACTCAACTAACTGGTTTAGAAAGTTTTTGCGTGTTCTCCAATAACTTCTCAGGCACAATTCCCATAGATTTTGGAAAGCACAGTCCCAAATTGAAGCGTGCCTGCTTTTCAGAAAACAGCTTCACAGGAGAGTTGCCTTCTGACTTGTGCAGTGGTGGCATGCTACTTTATTTGACTGCCGAACATAACAGCTTTTCCGGGCTATTGCCGAAGTCCATAAGAAATTGTTCAACACTATTCAGAGTTAGGCTTGAAGAAAACCAATTCAGTGGAAACATCACAGAAGCATTTGGGGTTCATCCAAATCTTGATTATATCTCACTTGGGGGAAATCAATTTGTTGGTGAGCTCTCTCCTAAGTGGGGTGAATGTGTCAAATTGACTAGGATGGAAATGAGTAGAAATCAACTATCCGGAAAAATTCCACCTGAGCTAGGTAAGTTAAGTCAATTACGAGATCTAAGCCTGCAATCCAATGAATTCACCGGCAATATCCCTCCTGAATTAGGAAATATAAGTCAACTTTACACGTTGAACTTGAGCAGGAACCATTTTACAGGAAAAATTCCAAAGAGTATTGGCAGACTCACTTGGCTTAAAATTCTTGATTTATCAGATAACAACTTCAACGGAAGCATACCCGAAGAGATCAACAATTGTAAGCAATTAACAAGCTTGAACTTGAGCCATAACAAGTTCTCAGGGGAAATACCTTATGAAGTTGCCAATCTTGTCTCACTCCAACAACTTTTGGATCTCAGCAGCAACTCTTTCTCTGGAGTGATTCCTCAAAATCTTGACAAGCTTATTTCATTGGAGTTTCTCAATATATCACACAACCATCTGTCAGGAACAATTCCAAAATCCGTCTCAAGTATGCCCAGCCTTCAAAATATTGATTTTTCTTACAACAACTTGACCGGTCCGATCCCAACTGGTGGTATTTTCACAAAAACAAAAGCTGGTGCCTTTGTTGGAAACTCAGGTTTGTGTGGTGTGCTAGTGTCACATCCTTGCACCTCTGCAAAAAAATCTGGAGGGGGTAAAAAAAAGATTCTTCTTAGTGTCATTATACCATTTTGTGGTGTATCATTTATTGTTATTATTGTTTTTGGAATGCTGAGATTCAGCCGGCAAGCCGATGAACCTGACGAAGAGTCAAAAATTATTAAAGATGGTGATCAACTTCATCACATAGTAAGGGGAAGAGATACAAGGTTCACATTTTCTGAAATTTTTAATGCCACTAATGGCTTCAATGACATGTACTGCATTGGAAAAGGAGGATTTGGGAGTGTTTACAAAGCAGAGTTATCTACAGGTGAAGTTATTGCTGTCAAAAGGCTGAATATCTCAAACTCAGACGAGATCCCAGCAACTAATGTCCGAAGTTTTGCGAATGAGATAAGAACACTTACAGAAGTGAGACACCGCAATATTATCAAGCTTTATGGTTATTTTTCCTGGAAGAAACAAATGTTCTTGATTTATGAATTTGCTGAGAGAGGCAACTTGACAGAAGTTCTTTATGAAGAAGGAGGCTTGGAGCTGAGCTGGCCTAAACGAGTCGAAATTGTGCATGGAATAGCGAATGCAATTGCCTACTTACACAATGATTGTTCTCCACCAATTGTGCACAGAGATGTTACATTGAATAACATATTACTCGACTCAGAATTCGAACCCCATCTTGCAGATTTCGGCATAGCAAAGCAGCTCAGTTCTAACACTTCAAACTGGACCTTGGTGGCAGGTTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACAATGAGGGTCACCGATAAGTGTGATGTCTATAGCTTTGGAGTGGTGGTATTGGAGGTAATTATGGGAAAACACCCAAGAGATCTCTTAACTACCATCTCTTCAATTAGGCCTTCGTCATCATCGATAGATCCGCAGGCACAAGTGCTTCTGAAAGATGCGTTGGACCATCGGCTTCCACCACCAAGTGGTCGATTAGCTCAAACAATAATGGTACTAGTGAGCATAGCTTTGGCATGCACGCGTACAACTCCAGAGTCCAGACCTACAATGCGTTCTGTTGCACAAGATATATCAACTACTATTACTAAAAGGGCTTATCTTACAGAGCCATTTGGGATGATCACTATGAACCAACTTATGGAGTTTCAAAAATAG 3618 0.3905 MKTCHQKAHALIFHIIFISLLPHKITEASTRTEAEALVKWKNSLTPPLPSSLTSWSFNNIDNLCSWGGIVCDSTNTTVSEIDLRSSKLNGTISHLNFGSLLNLTSLNLFGNSLEGSIPSTIGKLSKLTFLDFGNNSFEGTLPSELGQLKELQYLSFWNNSLNSTIPYEITNLPKVRHLHLGYNFFISPSSWSKYSSMPFLTYLSLYDNQFTYEIPSFIMECQNLTYLDLSWNNFNGTIPESVYSNLSKLEYLNLSYCKLEGKLSPNLSKLSNLKELHIAYNNFTGPIPSSLGQLRELSYLDLSHNMLNSTIPFELGFCTKLRYLSLTNNDLTGHLPLSLSNLTKISELALSDNFFSGEISASLVSNWTQLISLQVQNNSLRGEIPPEIGLLTKIEILFLFHNTFSGHIPIEIGNLKEIIQLDLSSNHFSGPIPPTIGNLRNITRLHLHDNELSGTISANIGNLTSLSVFDVNNNNLDGELPETITQLTGLESFCVFSNNFSGTIPIDFGKHSPKLKRACFSENSFTGELPSDLCSGGMLLYLTAEHNSFSGLLPKSIRNCSTLFRVRLEENQFSGNITEAFGVHPNLDYISLGGNQFVGELSPKWGECVKLTRMEMSRNQLSGKIPPELGKLSQLRDLSLQSNEFTGNIPPELGNISQLYTLNLSRNHFTGKIPKSIGRLTWLKILDLSDNNFNGSIPEEINNCKQLTSLNLSHNKFSGEIPYEVANLVSLQQLLDLSSNSFSGVIPQNLDKLISLEFLNISHNHLSGTIPKSVSSMPSLQNIDFSYNNLTGPIPTGGIFTKTKAGAFVGNSGLCGVLVSHPCTSAKKSGGGKKKILLSVIIPFCGVSFIVIIVFGMLRFSRQADEPDEESKIIKDGDQLHHIVRGRDTRFTFSEIFNATNGFNDMYCIGKGGFGSVYKAELSTGEVIAVKRLNISNSDEIPATNVRSFANEIRTLTEVRHRNIIKLYGYFSWKKQMFLIYEFAERGNLTEVLYEEGGLELSWPKRVEIVHGIANAIAYLHNDCSPPIVHRDVTLNNILLDSEFEPHLADFGIAKQLSSNTSNWTLVAGSYGYMAPELAQTMRVTDKCDVYSFGVVVLEVIMGKHPRDLLTTISSIRPSSSSIDPQAQVLLKDALDHRLPPPSGRLAQTIMVLVSIALACTRTTPESRPTMRSVAQDISTTITKRAYLTEPFGMITMNQLMEFQK* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0484 1205 CDD STKc_IRAK 909 1178 - -
Lan9g0484 1205 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lan9g0484 1205 ProSiteProfiles Protein kinase domain profile. 903 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0484 1205 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1028 1040 IPR008266 GO:0004672|GO:0006468
Lan9g0484 1205 Gene3D Phosphorylase Kinase; domain 1 868 983 - -
Lan9g0484 1205 Pfam Protein kinase domain 906 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0484 1205 ProSitePatterns Protein kinases ATP-binding region signature. 909 931 IPR017441 GO:0005524
Lan9g0484 1205 Gene3D Transferase(Phosphotransferase) domain 1 985 1190 - -
Lan9g0484 1205 SUPERFAMILY RNI-like 263 598 - -
Lan9g0484 1205 Pfam Leucine Rich Repeat 320 342 IPR001611 GO:0005515
Lan9g0484 1205 Pfam Leucine Rich Repeat 248 270 IPR001611 GO:0005515
Lan9g0484 1205 Gene3D Ribonuclease Inhibitor 441 827 IPR032675 -
Lan9g0484 1205 SUPERFAMILY RNI-like 513 793 - -
Lan9g0484 1205 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Lan9g0484 1205 SUPERFAMILY L domain-like 45 384 - -
Lan9g0484 1205 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 125 - -
Lan9g0484 1205 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 125 1185 - -
Lan9g0484 1205 Gene3D Ribonuclease Inhibitor 191 290 IPR032675 -
Lan9g0484 1205 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 9 125 - -
Lan9g0484 1205 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 125 1185 - -
Lan9g0484 1205 SUPERFAMILY Protein kinase-like (PK-like) 884 1177 IPR011009 -
Lan9g0484 1205 Pfam Leucine rich repeat 658 717 IPR001611 GO:0005515
Lan9g0484 1205 Pfam Leucine rich repeat 734 790 IPR001611 GO:0005515
Lan9g0484 1205 SMART LRR_typ_2 197 221 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 753 777 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 632 656 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 463 487 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 415 439 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 148 172 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 100 124 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 680 704 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 222 245 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 294 318 IPR003591 -
Lan9g0484 1205 SMART LRR_typ_2 246 270 IPR003591 -
Lan9g0484 1205 Gene3D Ribonuclease Inhibitor 300 366 IPR032675 -
Lan9g0484 1205 Gene3D Ribonuclease Inhibitor 367 440 IPR032675 -
Lan9g0484 1205 Pfam Leucine Rich repeat 221 236 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0484 Lan-Chr9 7237340 7241200 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0484 3 626 Receptor kinase-like Gene Family AT4G08850 31.157 5.22e-77 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan9g0484 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0484 - - gmx:100809137 1454.88