Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0479 ATGAAAACTTGTCATCAAAAGGCTCATGCTCTTATCTTTCACATAATCTTCATATCTTTGCTACCACATAAAATCACAGAAGCTTCAACAAGAACAGAAGCAGAAGCTCTTGTGAAATGGAAAAACAGTCTAACCCCTCCTCTTCCTTCTTCTCTAACATCATGGTCCTTCAACAACATTGACAACCTTTGTAGTTGGGGTGGCATTGTTTGTGACTCTACCAATACAACTGTCTCAGAGATAGACTTAAGAAGTTCCAAACTCAATGGAACAATATCTCACTTGAATTTTGGTTCCTTACTCAACCTCACTAGCCTCAACCTCTTTGGAAATAGTCTTGAAGGGTCAATTCCATCCACAATTGGTAAACTCTCCAAGCTCACTTTTCTAGACTTTGGAAATAACTCATTTGAAGGCACACTACCTTCTGAGCTAGGGCATCTAAAAGAGCTTCAATATCTTAGCTTTTGGAATAACAGTCTCAACAGTACTATTCCCTATGAGATCACAAATCTCCCAAAGGTAAGACATTTGCACCTTGGATATAACTTCTTTATATCTCCTTCTTCTTGGTCCAAATATTCAAGCATGCCTTTCTTAACTTACCTTAGTTTGTATGACAATCAATTCACCTATGAAATCCCAAGTTTCATAATGGAGTGTCAAAACTTAACATACCTTGACCTCTCTTGGAACAATTTCAATGGCACAATACCAGAATCTGTATATTCCAATCTAAGCAAACTTGAATACCTCAACCTCTCCTATTGTAAGCTAGAAGGAAAATTGTCACACAACTTGTCCAAGCTTTCTAATCTCAAAGAACTTCATATAGGTTATAACAACTTCAATGGTCCTATTCCCTCAGAAATAGGACTGATATCTGGACTTCAAATTCTTGTAATGGATCACATTTCAGCACAAGGGGAAATTCCTTCCTCCTTAGGCCAACTTAGGGAGTTAAGTTATCTTGATCTCAGTCATAATATGTTGAACTCTACAATTCCATTTGAACTTGGCTTCTGTACAAAATTGAGGTACTTGAGTTTAACAAATAATGATCTCACTGGTCACTTGCCTTTATCACTATCCAATCTGACTAAAATATCAGAGTTGGCATTATCAGATAATTTCTTTTCTGGTGAAATTTCTGCTTCATTGGTCTCTAACTGGACTCAGTTGATCTCTCTGCAAGTCCAAAACAATAGTTTAAGAGGAGAGATTCCTCCGGAGATTGGCCTTTTGACAAAAATCGAAATACTCTTTTTGTTTCGTAATACATTCTCTGGTCACATTCCTATAGAGATTGGAAACCTGAAAGAAATTATACAATTAGATCTTTCAAGTAACCATTTCTCCGGTCCAATTCCTTCGACCATTGGGAGCCTTGGAAATATGATAGTGTTGCATCTTTTCGGCAATGATCTCTCAGGAACCATTCCCACAGATATTGGAAACTTAACATCACTGCAAGAATTTGATGTCAGCCTTAATAATTTGGATGGAGAGTTACCAGAGACTATCACTCAACTAACTAGTTTAAGAACTTTTTCGGTGTTCGCCAACAAATTCTCAGGTAGTGTTCCCGGAAATTTTGGAAAGCACAGTCCCTATTTGTATTATGCCTACTTTTCAAACAACAGCTTCACAGGAGAGTTGCCTTCTGACTTGTGCAGTGGTGGCATGCTAGCTTATTTGGCTGCCAATAATAACAGCTTTTCCGGGCCATTGCCGAAGTCCATAAGAAATTGTTCAACACTATTCAGAGTTAGGCTTGAAGAAAACCAATTCAGTGGAAACATCACAGAAGCATTTGGGGTTCATCCAAATCTTGATTATATCTCACTTGGGGGAAATCAATTTGTTGGTGAGCTCTCTCCTAAGTGGGGTGAATGTGTCAAATTGACTAGGATGGAAATGAGTAGAAATCAACTATCCGGAAAAATTCCACCTGAGCTAGGTAAGTTAAGTCAATTACGAGATCTAAGCCTGCAATCCAATGAATTCACCGGCAATATCCCTCCTGAATTAGGAAATATAAGTCAACTTTACACGTTGAACTTGAGCAGGAACCATTTTACAGGAAAAATTCCAAAGAGTATTGGCAGACTCACTTGGCTTAAAATTCTTGATTTATCAGATAACAACTTCAACGGAAGCATACCCGAAGAGATCAACAATTGTAAGCAATTAACAAGCTTGAACTTGAGCCATAACAAGTTCTCAGGGGAAATACCTTATGAAGTTGCCAATCTTGTCTCACTCCAACAACTTTTGGATCTCAGCAGCAACTCTTTCTCTGGAGTGATTCCTCAAAATCTTGACAAGCTTATTTCATTGGAGTTTCTCAATATATCACACAACCATCTGTCAGGAACAATTCCAAAATCCGTCTCAAGTATGCCCAGCCTTCAAAATATTGATTTTTCTTACAACAACTTGACCGGTCCGATCCCAACTGGTGGTATTTTCACAAAAACAAAAGCTGGTGCCTTTGTTGGAAACTCAGGTTTGTGTGGTGTGCTAGTGTCACATCCTTGCACCTCTGCAAAAAAATCTGGAGGGGGTAAAAAAAAGATTCTTCTTAGTGTCATTATACCATTTTGTGGTGTATCATTTATTGTTATTATTGTTTTTGGAATGCTGAGATTCAGCCGGCAAGCCGATGAACCTGACGAAGAGTCAAAAATTATTAAAGATGGTGATCAACTTCATCACATAGTAAGGGGAAGAGATACAAGGTTCACATTTTCTGAAATTTTTAATGCCACTAATGGCTTCAATGACATGTACTGCATTGGAAGAGGAGGATTTGGGAGTGTTTACAGAGCAGAGTTATCTACAGGTGAAGTTATTGCTGTTAAAAGGTTGAATATCTCAAACTCGGACGAGATTCCAGCAACGAATTTCCGAAGTTTTGAGAATGAGATAAGAACACTTACAGAAGTGAGACACCGCAATATTATCAAGCTTTATGGTTATTTTTCCTGGAAGAAACAAATGTTCTTGATTTATGAATTTGCTGAGAGAGGCAACTTGACAGAAGTTCTTTATGAAGAAGGAGGCTTGGAGCTGAGCTGGCCTAAACGAGTCGAAATTGTGCATGGAATAGCGAATGCAATTGCCTACTTACACAATGATTGTTCTCCACCAATTGTGCACAGAGATGTTACATTGAATAACATATTACTCGACTCAGAATTCGAACCCCATCTTGCAGATTTCGGCATAGCAAAGCAGCTCAGTTCTAACACTTCAAACTGGACCTTGGTGGCAGGTTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACAATGAAGGTTACCAATAAGTGTGATGTCTACAGCTTCGGAGTGGTGGTATTGGAAGTAATTATGGGAAAACACCCCGGCGATCTCTTAACTACCATGTCTTCAGTTATGTCTTTATCATCAGTCGTAGATCCGCATGCACGAGTGCTTCTGAAAGATGTGCTGGACCAACGGCTTCCACCACCAAGTGGTCGATTAGCTCGAACAATAACGGTATTAGTAAGCATAGCCTTGGCATGCACCCGTACGACTCCAGAGTCCAGACCTACAATGCGTTCTGTTGCACAAGATATATCAACTACCATTACTAAAAAGGCTTATCTTACTGAGCCATTTGGTATGATCACCCTGAGCCAACTTATGTAG 3678 0.3915 MKTCHQKAHALIFHIIFISLLPHKITEASTRTEAEALVKWKNSLTPPLPSSLTSWSFNNIDNLCSWGGIVCDSTNTTVSEIDLRSSKLNGTISHLNFGSLLNLTSLNLFGNSLEGSIPSTIGKLSKLTFLDFGNNSFEGTLPSELGHLKELQYLSFWNNSLNSTIPYEITNLPKVRHLHLGYNFFISPSSWSKYSSMPFLTYLSLYDNQFTYEIPSFIMECQNLTYLDLSWNNFNGTIPESVYSNLSKLEYLNLSYCKLEGKLSHNLSKLSNLKELHIGYNNFNGPIPSEIGLISGLQILVMDHISAQGEIPSSLGQLRELSYLDLSHNMLNSTIPFELGFCTKLRYLSLTNNDLTGHLPLSLSNLTKISELALSDNFFSGEISASLVSNWTQLISLQVQNNSLRGEIPPEIGLLTKIEILFLFRNTFSGHIPIEIGNLKEIIQLDLSSNHFSGPIPSTIGSLGNMIVLHLFGNDLSGTIPTDIGNLTSLQEFDVSLNNLDGELPETITQLTSLRTFSVFANKFSGSVPGNFGKHSPYLYYAYFSNNSFTGELPSDLCSGGMLAYLAANNNSFSGPLPKSIRNCSTLFRVRLEENQFSGNITEAFGVHPNLDYISLGGNQFVGELSPKWGECVKLTRMEMSRNQLSGKIPPELGKLSQLRDLSLQSNEFTGNIPPELGNISQLYTLNLSRNHFTGKIPKSIGRLTWLKILDLSDNNFNGSIPEEINNCKQLTSLNLSHNKFSGEIPYEVANLVSLQQLLDLSSNSFSGVIPQNLDKLISLEFLNISHNHLSGTIPKSVSSMPSLQNIDFSYNNLTGPIPTGGIFTKTKAGAFVGNSGLCGVLVSHPCTSAKKSGGGKKKILLSVIIPFCGVSFIVIIVFGMLRFSRQADEPDEESKIIKDGDQLHHIVRGRDTRFTFSEIFNATNGFNDMYCIGRGGFGSVYRAELSTGEVIAVKRLNISNSDEIPATNFRSFENEIRTLTEVRHRNIIKLYGYFSWKKQMFLIYEFAERGNLTEVLYEEGGLELSWPKRVEIVHGIANAIAYLHNDCSPPIVHRDVTLNNILLDSEFEPHLADFGIAKQLSSNTSNWTLVAGSYGYMAPELAQTMKVTNKCDVYSFGVVVLEVIMGKHPGDLLTTMSSVMSLSSVVDPHARVLLKDVLDQRLPPPSGRLARTITVLVSIALACTRTTPESRPTMRSVAQDISTTITKKAYLTEPFGMITLSQLM* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0479 1225 SUPERFAMILY Protein kinase-like (PK-like) 908 1201 IPR011009 -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 295 506 - -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 391 602 - -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 26 290 - -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 465 661 - -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 610 1202 - -
Lan9g0479 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 246 459 - -
Lan9g0479 1225 Gene3D Ribonuclease Inhibitor 190 289 IPR032675 -
Lan9g0479 1225 Gene3D Ribonuclease Inhibitor 290 388 IPR032675 -
Lan9g0479 1225 Pfam Protein kinase domain 930 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0479 1225 Gene3D Ribonuclease Inhibitor 389 464 IPR032675 -
Lan9g0479 1225 ProSiteProfiles Protein kinase domain profile. 927 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0479 1225 Gene3D Phosphorylase Kinase; domain 1 892 1007 - -
Lan9g0479 1225 SUPERFAMILY L domain-like 342 530 - -
Lan9g0479 1225 Pfam Leucine Rich repeat 221 236 IPR001611 GO:0005515
Lan9g0479 1225 SUPERFAMILY L domain-like 45 383 - -
Lan9g0479 1225 CDD STKc_IRAK 933 1202 - -
Lan9g0479 1225 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1052 1064 IPR008266 GO:0004672|GO:0006468
Lan9g0479 1225 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lan9g0479 1225 SUPERFAMILY RNI-like 523 817 - -
Lan9g0479 1225 Pfam Leucine rich repeat 758 814 IPR001611 GO:0005515
Lan9g0479 1225 Pfam Leucine rich repeat 682 741 IPR001611 GO:0005515
Lan9g0479 1225 Gene3D Ribonuclease Inhibitor 468 851 IPR032675 -
Lan9g0479 1225 ProSitePatterns Protein kinases ATP-binding region signature. 933 955 IPR017441 GO:0005524
Lan9g0479 1225 Pfam Leucine Rich Repeat 248 270 IPR001611 GO:0005515
Lan9g0479 1225 Pfam Leucine Rich Repeat 344 366 IPR001611 GO:0005515
Lan9g0479 1225 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Lan9g0479 1225 SMART LRR_typ_2 704 728 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 100 124 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 246 270 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 318 342 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 777 801 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 656 680 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 197 221 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 487 511 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 222 245 IPR003591 -
Lan9g0479 1225 SMART LRR_typ_2 148 172 IPR003591 -
Lan9g0479 1225 Gene3D Transferase(Phosphotransferase) domain 1 1009 1214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0479 Lan-Chr9 7141841 7145626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0479 3 578 Receptor kinase-like Gene Family AT4G08850 30.663 8.37e-70 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan9g0479 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0479 - - gmx:100784185 1522.68