Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0474 ATGCCCACTTTCCTTTTCTTCTTCCTTCTTCCTTTTCTTACCTTTCTTTTCACTTCTTCAGTGAAGTCGGTTTCTCTAAGTGTATCATTCACTTCATCAGAACGAGGTAAGACATGGTTAGTTAAACCTTCTTCTAGACCATCTCCCGCATCAGCACCATCTCCATCTTATCAAGGTCCTAGCGTGACTCCAAGACCAAGACATTATCGTCACCGCGGTCACCATCATAGCACGACACCGTATGTAGTGGCTCCACCCCCTTCAGAAGACCTAGATTGTGTCTGTACGGAACCACTCATATCAACTCCGTATGGTTCTCCTTGTGGTTGTGTATTTCCCATGAGAGTCAGGCTTTCACTGGATATAGCTCTTTATGCTATTTTTCCGGTAATGGACGAGTTAGAGATTGAAGTGGCATTAGGCACATATTTAGAGCAAAGTCAGGTCAAGATAATGGGAGCCAATGCCGATAGTCAAAACCAGGGAAAAACTATTGTTGATATTTACTTGGTTCCACTCGGAGATAAATTTGATGATACAACTGCGTCTTTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGACTCTTTTTGGCGATTATAACGTCATGTACCTTACTTATGAAGGATTTCCACCATCACCGTCATATGGAAATTATGACGGGAATGGTCCCGGTGAAAGTCCAAAGAGTCTGCCACTCGGTGCCAACTTTGACAACAAGAACCGGAAAATGAATCTTAGAACCATACTCATCATTGCTTTAACTTCTTTTGTACTCTTGCTGGTTTTGGTTGGAGCATGTTTTGGCATTTTGAAATGGAGGAAGGTCACAAAACCATCAAGTGCCGTTGGCCCTACATTCACGTCATCTATAAACAAGAGATCTGGCCTGGGGTCTATGTTGTCAAGCAGTATCACAAGCTCAACGTCGATGTCCCTTATGTCCACAATGCCTAATTCCATCCAATCTGTTAAAACATTTTCACATTCCGAGCTTGAGAAAGCAACAGATAAGTTTAACTCGAAGAGAGTATTAGGAGAGGGAGGATTTGGACGTGTTTACAGCGGGACACTGGAAGATGGGACTGAAGTTGCAGTTAAGATGCTAACAAGGGATAATAATCAGAACGGAGACCGTGAATTCATCGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGACGTTGCTTGGTTTACGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATCTGCATGGTGTCGACAAGAAAGACGGGCCACTAGATTGGGAAGCGCGGATGAAAATTGCCCTTGGAGCTGCAAGAGGGTTGGCATATCTTCACGAGGATTCTAATCCTCGCGTGATTCACCGTGACTTTAAAGCTAGCAATGTGTTATTAGAAGATGACTTTATCCCCAAGGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACCGAAGGAAGTCATCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCCCCGGAGTATGCGATGACAGGCCATTTACTTGTTAAAAGTGACGTATATAGCTTTGGCGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAGGGACGGGAGAATCTTGTCACTTGGGCACGACCTCTGTTGACGACTCGAGAAAGTTTAGAACAGCTAGTAGATCCATCTTTAGCCGGAACATACAACTTCGACGACACTGCGAAGTTCGCTTCCATCGCTTCAATGTGTGTTCACCCGGAGGTCACTCAGAGACCCTTTATGGGCGAAGTTGTGCAAGCTATTAAGTTGATATACAACGACACAGATCACGAGACTTGCGGAGATTGTTTTAGCCTGAAGGACTCATCTACCCACGAGTCTGATTTTCGAGGCAGCCATCTTGCCCGTTCTGATAGCAGTTGGTGGAATGGTGGAGGGTTAACTCCGAGATTAACTTATGGCCAAACATCATCTTTCATCACAATGGAGTATAGTTCTGGCCCAATCGAAATGGAAAACAGACATTTTTCGACTTCAAGTTTGGTTGAAGATATATCTTTACCAATTCGGCACGGAAACATGTCAGGTCCCTTAAGAACAAACAGAAGCAAGTTATCATTATATAGATTTACAGGAAGCAAGAGTGAGCATGGAGGAGTCTCTCCCAACTGTGAATGGTGA 2226 0.4412 MPTFLFFFLLPFLTFLFTSSVKSVSLSVSFTSSERGKTWLVKPSSRPSPASAPSPSYQGPSVTPRPRHYRHRGHHHSTTPYVVAPPPSEDLDCVCTEPLISTPYGSPCGCVFPMRVRLSLDIALYAIFPVMDELEIEVALGTYLEQSQVKIMGANADSQNQGKTIVDIYLVPLGDKFDDTTASLTSERFWHKKVPLNRTLFGDYNVMYLTYEGFPPSPSYGNYDGNGPGESPKSLPLGANFDNKNRKMNLRTILIIALTSFVLLLVLVGACFGILKWRKVTKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSMSLMSTMPNSIQSVKTFSHSELEKATDKFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKDGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFIPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGRENLVTWARPLLTTRESLEQLVDPSLAGTYNFDDTAKFASIASMCVHPEVTQRPFMGEVVQAIKLIYNDTDHETCGDCFSLKDSSTHESDFRGSHLARSDSSWWNGGGLTPRLTYGQTSSFITMEYSSGPIEMENRHFSTSSLVEDISLPIRHGNMSGPLRTNRSKLSLYRFTGSKSEHGGVSPNCEW* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0474 741 MobiDBLite consensus disorder prediction 40 83 - -
Lan9g0474 741 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0474 741 Gene3D Transferase(Phosphotransferase) domain 1 420 636 - -
Lan9g0474 741 Pfam Protein tyrosine and serine/threonine kinase 345 615 IPR001245 GO:0004672|GO:0006468
Lan9g0474 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lan9g0474 741 SUPERFAMILY Protein kinase-like (PK-like) 324 625 IPR011009 -
Lan9g0474 741 PANTHER OS01G0750732 PROTEIN 7 738 - -
Lan9g0474 741 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lan9g0474 741 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 7 738 - -
Lan9g0474 741 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Lan9g0474 741 CDD STKc_IRAK 349 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0474 Lan-Chr9 7057864 7063443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0474 92 733 Receptor kinase-like Gene Family AT5G56890 53.800 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan9g0474 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0474 - - gmx:100792309 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0474 9 7057864 7063443 Lan19g0484 19 7124574 7130391 LSH