Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0474 | ATGCCCACTTTCCTTTTCTTCTTCCTTCTTCCTTTTCTTACCTTTCTTTTCACTTCTTCAGTGAAGTCGGTTTCTCTAAGTGTATCATTCACTTCATCAGAACGAGGTAAGACATGGTTAGTTAAACCTTCTTCTAGACCATCTCCCGCATCAGCACCATCTCCATCTTATCAAGGTCCTAGCGTGACTCCAAGACCAAGACATTATCGTCACCGCGGTCACCATCATAGCACGACACCGTATGTAGTGGCTCCACCCCCTTCAGAAGACCTAGATTGTGTCTGTACGGAACCACTCATATCAACTCCGTATGGTTCTCCTTGTGGTTGTGTATTTCCCATGAGAGTCAGGCTTTCACTGGATATAGCTCTTTATGCTATTTTTCCGGTAATGGACGAGTTAGAGATTGAAGTGGCATTAGGCACATATTTAGAGCAAAGTCAGGTCAAGATAATGGGAGCCAATGCCGATAGTCAAAACCAGGGAAAAACTATTGTTGATATTTACTTGGTTCCACTCGGAGATAAATTTGATGATACAACTGCGTCTTTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGACTCTTTTTGGCGATTATAACGTCATGTACCTTACTTATGAAGGATTTCCACCATCACCGTCATATGGAAATTATGACGGGAATGGTCCCGGTGAAAGTCCAAAGAGTCTGCCACTCGGTGCCAACTTTGACAACAAGAACCGGAAAATGAATCTTAGAACCATACTCATCATTGCTTTAACTTCTTTTGTACTCTTGCTGGTTTTGGTTGGAGCATGTTTTGGCATTTTGAAATGGAGGAAGGTCACAAAACCATCAAGTGCCGTTGGCCCTACATTCACGTCATCTATAAACAAGAGATCTGGCCTGGGGTCTATGTTGTCAAGCAGTATCACAAGCTCAACGTCGATGTCCCTTATGTCCACAATGCCTAATTCCATCCAATCTGTTAAAACATTTTCACATTCCGAGCTTGAGAAAGCAACAGATAAGTTTAACTCGAAGAGAGTATTAGGAGAGGGAGGATTTGGACGTGTTTACAGCGGGACACTGGAAGATGGGACTGAAGTTGCAGTTAAGATGCTAACAAGGGATAATAATCAGAACGGAGACCGTGAATTCATCGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGACGTTGCTTGGTTTACGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATCTGCATGGTGTCGACAAGAAAGACGGGCCACTAGATTGGGAAGCGCGGATGAAAATTGCCCTTGGAGCTGCAAGAGGGTTGGCATATCTTCACGAGGATTCTAATCCTCGCGTGATTCACCGTGACTTTAAAGCTAGCAATGTGTTATTAGAAGATGACTTTATCCCCAAGGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACCGAAGGAAGTCATCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCCCCGGAGTATGCGATGACAGGCCATTTACTTGTTAAAAGTGACGTATATAGCTTTGGCGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAGGGACGGGAGAATCTTGTCACTTGGGCACGACCTCTGTTGACGACTCGAGAAAGTTTAGAACAGCTAGTAGATCCATCTTTAGCCGGAACATACAACTTCGACGACACTGCGAAGTTCGCTTCCATCGCTTCAATGTGTGTTCACCCGGAGGTCACTCAGAGACCCTTTATGGGCGAAGTTGTGCAAGCTATTAAGTTGATATACAACGACACAGATCACGAGACTTGCGGAGATTGTTTTAGCCTGAAGGACTCATCTACCCACGAGTCTGATTTTCGAGGCAGCCATCTTGCCCGTTCTGATAGCAGTTGGTGGAATGGTGGAGGGTTAACTCCGAGATTAACTTATGGCCAAACATCATCTTTCATCACAATGGAGTATAGTTCTGGCCCAATCGAAATGGAAAACAGACATTTTTCGACTTCAAGTTTGGTTGAAGATATATCTTTACCAATTCGGCACGGAAACATGTCAGGTCCCTTAAGAACAAACAGAAGCAAGTTATCATTATATAGATTTACAGGAAGCAAGAGTGAGCATGGAGGAGTCTCTCCCAACTGTGAATGGTGA | 2226 | 0.4412 | MPTFLFFFLLPFLTFLFTSSVKSVSLSVSFTSSERGKTWLVKPSSRPSPASAPSPSYQGPSVTPRPRHYRHRGHHHSTTPYVVAPPPSEDLDCVCTEPLISTPYGSPCGCVFPMRVRLSLDIALYAIFPVMDELEIEVALGTYLEQSQVKIMGANADSQNQGKTIVDIYLVPLGDKFDDTTASLTSERFWHKKVPLNRTLFGDYNVMYLTYEGFPPSPSYGNYDGNGPGESPKSLPLGANFDNKNRKMNLRTILIIALTSFVLLLVLVGACFGILKWRKVTKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSMSLMSTMPNSIQSVKTFSHSELEKATDKFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKDGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFIPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGRENLVTWARPLLTTRESLEQLVDPSLAGTYNFDDTAKFASIASMCVHPEVTQRPFMGEVVQAIKLIYNDTDHETCGDCFSLKDSSTHESDFRGSHLARSDSSWWNGGGLTPRLTYGQTSSFITMEYSSGPIEMENRHFSTSSLVEDISLPIRHGNMSGPLRTNRSKLSLYRFTGSKSEHGGVSPNCEW* | 742 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0474 | 741 | MobiDBLite | consensus disorder prediction | 40 | 83 | - | - | |
Lan9g0474 | 741 | ProSiteProfiles | Protein kinase domain profile. | 343 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan9g0474 | 741 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 636 | - | - | |
Lan9g0474 | 741 | Pfam | Protein tyrosine and serine/threonine kinase | 345 | 615 | IPR001245 | GO:0004672|GO:0006468 | |
Lan9g0474 | 741 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 466 | 478 | IPR008271 | GO:0004672|GO:0006468 | |
Lan9g0474 | 741 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 625 | IPR011009 | - | |
Lan9g0474 | 741 | PANTHER | OS01G0750732 PROTEIN | 7 | 738 | - | - | |
Lan9g0474 | 741 | ProSitePatterns | Protein kinases ATP-binding region signature. | 349 | 371 | IPR017441 | GO:0005524 | |
Lan9g0474 | 741 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 7 | 738 | - | - | |
Lan9g0474 | 741 | Gene3D | Phosphorylase Kinase; domain 1 | 314 | 419 | - | - | |
Lan9g0474 | 741 | CDD | STKc_IRAK | 349 | 619 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0474 | Lan-Chr9 | 7057864 | 7063443 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0474 | 92 | 733 | Receptor kinase-like Gene Family | AT5G56890 | 53.800 | 0.0 | 630 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Lan9g0474 | PK_Tyr_Ser-Thr | 1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0474 | - | - | gmx:100792309 | 1120.53 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan9g0474 | 9 | 7057864 | 7063443 | Lan19g0484 | 19 | 7124574 | 7130391 | LSH |