Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0473 ATGAATTGTGTTATTATTGCAAGTCCTATAGTTGGGTCTCATATTTGGGTTGAGGATCCTGATATAGCTTGGATTGATGGTGAAGTTTTGGAGGTTAATAATGAAGAAATCAAAGTTCTTTGCACTTCAGGGAAGACAGTTGTTGTAAAAGCTTCGCGTGTTCATCATAAAGATACCGAAGCTCCACCGAGTGGAGTGGATGATATGATAAAGCTTGCATATCTGCATGAACCTGGAGTCCTAGATAACCTGAGATCAAGATATGATATCAATGAAATTTATACATACACCGGGAATATACTAATTGCTGTCAACCCTTTTATAAAACTTCCTCATTTATATGATAGCCATATGATGGCACAATACAAAGGTGCAATTTTTGGTGAGCTTAGTCCACATCCCTTTGCTGTTGCAGATGCTGCATATAGGCTTATGATCAATGACGGAATCAGCCAGTCGATTTTGGTTAGTGGTGAAAGTGGAGCGGGTAAAACAGAAAGTACTAAGTTACTTATGCGGTATCTTGCTTACATGGGAGGGAGATCTGCTACTGCTGCTGAAGGTAGAACTGTTGAGCAAAAAGTTCTCGAGTCTAATCCGGTTCTCGAAGCCTTTGGCAATGCAAAGACTGTCAGGAACAATAACTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGACAAGAAGGGAAGAATCTCAGGAGCAGCTATCAGAACTTATCTGCTAGAAAGATCACGTGTTTGCCAGGTCTCAGATCCGGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTTCAGAGGATATCAAGAAGTACAAATTAGGAAATCCGAGAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTGGAAGGCGTTGATGAATCTAAAGAATATAGCGCCACAAGGAGCGCAATGGATGTCGTTGGAATAAGTCCCGAGGAGCAGGATGCAATATTTCGAGTCGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTACGAGGGGGAAGGAGATGGACTCATCTATGCCCAAAGACGAAAAATCTCTGTTCCATCTACAGACTGCTGCCGAGCTTTTCATGTGTGATGCGAAAGCACTCGAAGACTCTCTTTGCAAACGTGTAATTGTAACTCGTGATGAAACTATTACGAAATGGCTGGATCCTGAAACCGCTGCAGTCAGCCGAGATGCTTTGGCAAAGATTGTGTACACTAGGTTGTTTGACTGGTTAGTTGATAAGATCAATAATTCCATTGGTCAAGACCCCGAGTCAAAATACTTAATTGGAGTGCTAGATATTTACGGTTTTGAGAGTTTCAAGAATAACAGTTTCGAGCAATTTTGTATAAATTTGACAAATGAAAAGCTTCAACAACATTTTAATCAGCATGTTTTTAAAATGGAGCAAGAAGAATACAAAAATGAGGAAATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTCGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTACTGGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAATTATCGCGCACCGACTTCACAGTTTGTCATTATGCTGGTGATGTCACTTATCAAGCCGATTTGTTCCTCGACAAGAACAAAGATTACGTTGTCGCAGAACACCAAGCGCTTCTTTATGCTTCCAAATGTGCCTTCGTATCGAGTTTGTTTCTCCCTTCACCCGTGGATTCATCCAAAAAATCGAAGTTCTCTTCAATAGGTTCTCAATTTAAGCAACAATTGCAAGCTTTACTCGAAACTCTCAGTGGCACTGAGCCGCATTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTCCTGCAGCAACTACGTTGTGGAGGAGTTATGGAGGCAATTAGAATAAGCTGTGCTGGGTATCCCACTAGAAAAACCTTCGACGAATTTGCCGATCGATTTGGCCTTCTTGCACCTCAAGTGTTGGATGAAAGTATCGATGAGGTCGCGGCTTGCAAGAGGATCCTAGAAATTGTTGGACTTAAAGGCTATCAGATCGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAACTGGCAGAATTAGATACAAGCAGGAGTTTGATCTTAGGAAAGTCAGCAATCATTATTCAGAGGAAAATCCGTTCCTATTTGACTCGTCGAAGTTTCATATCAGCTCGTTTGTCTGCTATTCAGATTCAAGCTGTATGCAGAGGACAACTTGCTAGGCAAGCTTACGAGGTAAAGCGTAAGGAGGCTTCTATTTTGGCGATTCAGTCGTATTACCGGATGCAGATTGCTAGGAAGGTATACAAAGAGTTGTATACCTCTGCTGTCTTGATTCAGACTTGCATGCGGGGGATGGCTGCTCGTTCCGAGCTATGCTTTAGAAGGTGGACTAGAGCATCAATTGTCATTCAGAGCCACTGCCGAAAATACCTGGCACAGCTTCATTTTAAGAGATTAAAGAAGGCAGCAATTGCCACACAATGTGCATGGAGAGGAAAAGTTGCACGGCGTGAACTGCGGCTGCTCAAGATGGCTGCAAGAGAGACAGGTGCTCTCCAAGCTGCAAAAAATCAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGATTGCAGCTAGAAAAACGTTTGAGGGTTGACATCGAAGAAGCAAAAACACAAGAGAACAAAAGATTACAGTCTGCTTTGCTAGAGACACAACTTCAGTTTAAAGAAACTGAGATACTTCTCCAGAAGGAGCGCGAGGCTACGAAAAAAGCGGAAGAGAGAGAGCCTATCATAAAGGAGATTCCAGTTGTTGATCATGCTTTGTTGGAGAAACTCAGCAGTGAAAATGAAAAACTCAAGAACATGGTGAGTTCACTGGAAAAGAAAATTGATGAAACCGAAAAAAGGTACGAAGAGGCGAACAGAATTGGCGAAGAAAGGTTGAAGCAAGCTTTGGAAGCCGAGTCAAAACTAACCCAGTTGAAAAATGCTATGCAAAGGCTTGAAGAGAAATTCTCAGACATTGAATCTGCAAACCTTGTCCTTAAGAAACAATCTCAGCAAAACTCATCTGTGAAAACATTAGCAGAGCACATATCGACCCCTATAGCTGAGGAAACATGTGTTACACCTGTGAAACAGTTTGGTACAGAATCCGACGCTAAATTGAGGAGATCTTTCATTGAACGACAACTTGAGAATGTCGATTCACTTGTCAAATCTGTAACGAAAAATATTGGCTTTAATAATGGAATGCCAGTTGCTGCTTTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAAAACTAGTGTATTCGATCGCCTTATCCAGATGATTGGTTCAGAAATTGAGAATGAAGACGGCAACGATCTTATGGCATATTGGCTGTCAAATACATCTGCGTTATTGTTTTTACTCGAACAAAGCCTGATATCCGATGATGTAACGCCTGCAAGCCCAGCTAGAAAACTATCTAATACAACATCCCTTTTCGGAAGAATGACAGGCTTTCTCTCATCCCCTTCTTCTGCCAATTTTACTGCCCCTGCGTTGGACGTTGTCCGGAAGGTAGAGGCTAAATACCCGGCATTGCTTTTCAAGCAGCAGCTCACAGCCTATATGGAGAAAGTATACGGCATCATTCGAGACAACTTGAAAAAGGAGTTAGCATCTGTACTTGCATTATGTATCCAGGCACCAAGAACTTCAAAGGGAGTGTTACGATCTGGTCGAAACTTCGGTAAAGATTCTGCCATGGTTCACTGGCAGACTATTATTGAATCCCTGAACACCCTCCTCTCTACACTGAAAGAAAACTTTGTGCCTTCAGTTCTTATACAAAAGATCTTCAATCAAACATTCTCATATATTAATGTGCAACTCTTCAATAGTCTTCTTCTGCGCCGCGATTGTTGCACATTCAGCAACGGAGAATATGTGAAAGCTGGATTGGCTGAATTGGAGCTATGGTGTTGTCAAACAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAACTGAAGCACATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAATATCGAATTTCCTATGATGAAATCATCAATGATTTATGCCCTATCCTAAGTGTCCAGCAGCTGTATAGAATCTGCTCGCTTTACTGGGATGGTAACTACAATACTCTGAGTGTATCTCCAGATGTGCTTTTGAGCATGAAAATGCTTATGACTGAGGACTCTAATACTGGCCAGAGTGATTCTTTCTTGTTGGATGATAGTTGCAGCATACCCTTCTCAGTGAATGATCTTTCTACATCAATAAAATTGAAGGATTTCTCAGAAATGAAACCAGCAAATGAGCTTCTTCACAATCCAGCATTCCAATTCTTGAATGAGTAG 4500 0.4091 MNCVIIASPIVGSHIWVEDPDIAWIDGEVLEVNNEEIKVLCTSGKTVVVKASRVHHKDTEAPPSGVDDMIKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAIFGELSPHPFAVADAAYRLMINDGISQSILVSGESGAGKTESTKLLMRYLAYMGGRSATAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPSEDIKKYKLGNPRTFHYLNQSNCYELEGVDESKEYSATRSAMDVVGISPEEQDAIFRVVAAILHLGNIEFTRGKEMDSSMPKDEKSLFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPETAAVSRDALAKIVYTRLFDWLVDKINNSIGQDPESKYLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKNEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRTDFTVCHYAGDVTYQADLFLDKNKDYVVAEHQALLYASKCAFVSSLFLPSPVDSSKKSKFSSIGSQFKQQLQALLETLSGTEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPQVLDESIDEVAACKRILEIVGLKGYQIGKTKVFLRAGQLAELDTSRSLILGKSAIIIQRKIRSYLTRRSFISARLSAIQIQAVCRGQLARQAYEVKRKEASILAIQSYYRMQIARKVYKELYTSAVLIQTCMRGMAARSELCFRRWTRASIVIQSHCRKYLAQLHFKRLKKAAIATQCAWRGKVARRELRLLKMAARETGALQAAKNQLEKQVEDLTLRLQLEKRLRVDIEEAKTQENKRLQSALLETQLQFKETEILLQKEREATKKAEEREPIIKEIPVVDHALLEKLSSENEKLKNMVSSLEKKIDETEKRYEEANRIGEERLKQALEAESKLTQLKNAMQRLEEKFSDIESANLVLKKQSQQNSSVKTLAEHISTPIAEETCVTPVKQFGTESDAKLRRSFIERQLENVDSLVKSVTKNIGFNNGMPVAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSEIENEDGNDLMAYWLSNTSALLFLLEQSLISDDVTPASPARKLSNTTSLFGRMTGFLSSPSSANFTAPALDVVRKVEAKYPALLFKQQLTAYMEKVYGIIRDNLKKELASVLALCIQAPRTSKGVLRSGRNFGKDSAMVHWQTIIESLNTLLSTLKENFVPSVLIQKIFNQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQTKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICSLYWDGNYNTLSVSPDVLLSMKMLMTEDSNTGQSDSFLLDDSCSIPFSVNDLSTSIKLKDFSEMKPANELLHNPAFQFLNE* 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0473 1499 Gene3D - 739 787 - -
Lan9g0473 1499 Gene3D - 788 835 - -
Lan9g0473 1499 Gene3D - 836 886 - -
Lan9g0473 1499 ProSiteProfiles Dilute domain profile. 1145 1445 IPR002710 -
Lan9g0473 1499 Pfam DIL domain 1321 1423 IPR002710 -
Lan9g0473 1499 Coils Coil 881 915 - -
Lan9g0473 1499 PANTHER MYOSIN 8 1497 - -
Lan9g0473 1499 CDD MYSc_Myo11 78 724 IPR036018 -
Lan9g0473 1499 SMART iq_5 738 760 IPR000048 GO:0005515
Lan9g0473 1499 SMART iq_5 761 783 IPR000048 GO:0005515
Lan9g0473 1499 SMART iq_5 809 831 IPR000048 GO:0005515
Lan9g0473 1499 SMART iq_5 786 808 IPR000048 GO:0005515
Lan9g0473 1499 SMART iq_5 834 856 IPR000048 GO:0005515
Lan9g0473 1499 SMART iq_5 857 879 IPR000048 GO:0005515
Lan9g0473 1499 CDD MyosinXI_CBD 1096 1467 IPR037975 GO:0007015
Lan9g0473 1499 Gene3D - 443 627 - -
Lan9g0473 1499 ProSiteProfiles IQ motif profile. 787 813 IPR000048 GO:0005515
Lan9g0473 1499 Gene3D - 256 314 - -
Lan9g0473 1499 Pfam Myosin N-terminal SH3-like domain 12 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 Pfam IQ calmodulin-binding motif 765 782 IPR000048 GO:0005515
Lan9g0473 1499 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Lan9g0473 1499 Pfam IQ calmodulin-binding motif 860 879 IPR000048 GO:0005515
Lan9g0473 1499 Pfam IQ calmodulin-binding motif 836 856 IPR000048 GO:0005515
Lan9g0473 1499 Pfam IQ calmodulin-binding motif 741 759 IPR000048 GO:0005515
Lan9g0473 1499 Coils Coil 941 961 - -
Lan9g0473 1499 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Lan9g0473 1499 ProSiteProfiles IQ motif profile. 741 768 IPR000048 GO:0005515
Lan9g0473 1499 ProSiteProfiles Myosin motor domain profile. 64 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 790 IPR027417 -
Lan9g0473 1499 Gene3D Myosin VI head, motor domain, U50 subdomain 316 605 - -
Lan9g0473 1499 Pfam Myosin head (motor domain) 66 724 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 Coils Coil 976 1010 - -
Lan9g0473 1499 ProSiteProfiles IQ motif profile. 762 790 IPR000048 GO:0005515
Lan9g0473 1499 Gene3D Kinesin motor domain 67 666 IPR036961 -
Lan9g0473 1499 ProSiteProfiles IQ motif profile. 836 864 IPR000048 GO:0005515
Lan9g0473 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 887 IPR027417 -
Lan9g0473 1499 SMART DIL_2 1320 1427 IPR002710 -
Lan9g0473 1499 Coils Coil 1018 1052 - -
Lan9g0473 1499 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 PRINTS Myosin heavy chain signature 433 461 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 PRINTS Myosin heavy chain signature 486 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 SMART MYSc_2a 58 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0473 1499 Gene3D - 670 737 - -
Lan9g0473 1499 PANTHER MYOSIN-14 8 1497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0473 Lan-Chr9 7041847 7052420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0473 8 1498 Myosins gene family AT5G43900 73.223 0.0 2254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0473 K10357 - gmx:100795648 2522.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0473 9 7041847 7052420 Lan19g0483 19 7097019 7118798 LSH
Lan9g0473 9 7041847 7052420 Lan11g1368 11 20937994 20967953 PCT
Lan9g0473 9 7041847 7052420 Lan20g0716 20 5879728 5895337 PCT
Lan11g1368 11 20937994 20967953 Lan9g0473 9 7041847 7052420 PCT
Lan20g0716 20 5879728 5895337 Lan9g0473 9 7041847 7052420 PCT