Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0472 ATGTATCAAAAAATGGAGAACTTATTTCACCTAGTTGATCATGAAGACTTCTTCTCAAGGCGTTGCATTTGGGTCAATGGTCCTATAATTGTAGGGGCAGGTCCTTCAGGTTTAGCCACAGCAGCATGCCTTAGAAATGAAGGGGTACCCTTTGTTGTTCTAGAAAGAGCAAATTGTATAGCATCATTATGGCAAAGAAGAACTTATGATAGGTTGAAACTTCACCTTCCTAAGAAATTTTGTCAACTTCCTAAACTTCCATTCCCTCAAGATTTTCCTGAATACCCATCAAAGAAACAGTTCATAGATTATCTTGAAACCTATGCTAGGAAATTTGAGATCAACCCACAATTCAATGAGTGTGTGCAATGTGCTAGGTATGATGAAACAAGTGGGTTATGGAGGGTGAAGAGTTTTTCTTCAACAAGTAGAAATGAGGTTGAGTATATTTGTAGGTGGCTTGTTGTTGCAACAGGTGAAAATGCTGAGTGTATTATGCCTGAGATTGAAGGGTTGGGTGAGTTCAAAGGTGAAGTTGTTCATGCATGTGATTATAAGTCAGGTGAAAGGTTCAATGGGAAGAAAGTGATTGTTGTTGGTTGTGGTAATTCTGGTATGGAGATCTCTCTTGACCTTTGTAATCACCATGCATCACCTTTTATGGTTGTTCGTAGCTCGGTTCATGTCTTACCAAGAGAGATTTTTGGGCTATCAACATTTGAATTAGCATTTTTTATGCTGAAATGGCTACCCCTTTGGGTAGTTGACAAGTTTCTATTGATCTTGACATGGTTTATTCTTGGTAACATAGAAAAGTGTGGGATAAAAAGACCTACAAAGGGACCATTACAGTTGAAAAACACAAAGGGAAAGACACCAGTTTTGGACATTGGTACCTTAGAGAAAATTAGATGTGGTAACATAAATGTTGTACCAGGAATCAAGAGGTTTAATGATAGAAATGTTGAGTTTGTTAATGGTGAAAAGATTGATGTTGATGCTGTTGTTCTTGCTACTGGTTATAGAAGCAATGTTCCTTCTTGGCTTCAGGAATGTGAATTTTTCTCCAAAAATGGATACCCAAAGATGCCATTCCCACATGGTTGGAAAGGAAACTCAGGACTTTATGCTGTTGGGTTCACAAAGAAGGGTCTCTCTGGTGCTTCATATGATGCTATGAATATTGCTAAAGATATTAGTAAAGTGTGGAAACAAGAAACTAAGCAAAAGAAGCAAAGAACCACTGCTTGTCATAGACGTTGCATTTCACAGTTCTAA 1278 0.3795 MYQKMENLFHLVDHEDFFSRRCIWVNGPIIVGAGPSGLATAACLRNEGVPFVVLERANCIASLWQRRTYDRLKLHLPKKFCQLPKLPFPQDFPEYPSKKQFIDYLETYARKFEINPQFNECVQCARYDETSGLWRVKSFSSTSRNEVEYICRWLVVATGENAECIMPEIEGLGEFKGEVVHACDYKSGERFNGKKVIVVGCGNSGMEISLDLCNHHASPFMVVRSSVHVLPREIFGLSTFELAFFMLKWLPLWVVDKFLLILTWFILGNIEKCGIKRPTKGPLQLKNTKGKTPVLDIGTLEKIRCGNINVVPGIKRFNDRNVEFVNGEKIDVDAVVLATGYRSNVPSWLQECEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKKGLSGASYDAMNIAKDISKVWKQETKQKKQRTTACHRRCISQF* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0472 425 PRINTS Pyridine nucleotide disulphide reductase class-II signature 27 49 - -
Lan9g0472 425 PRINTS Pyridine nucleotide disulphide reductase class-II signature 191 215 - -
Lan9g0472 425 Gene3D - 28 409 IPR036188 -
Lan9g0472 425 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 13 423 - -
Lan9g0472 425 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Lan9g0472 425 PRINTS FAD-dependent pyridine nucleotide reductase signature 195 213 - -
Lan9g0472 425 Pfam Flavin-binding monooxygenase-like 30 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lan9g0472 425 SUPERFAMILY FAD/NAD(P)-binding domain 29 300 IPR036188 -
Lan9g0472 425 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 13 423 - -
Lan9g0472 425 SUPERFAMILY FAD/NAD(P)-binding domain 193 403 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0472 Lan-Chr9 7029907 7032556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0472 K11816 - gmx:100796169 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0472 9 7029907 7032556 Lan5g1225 5 26111281 26113546 LSH
Lan9g0472 9 7029907 7032556 Lan19g0482 19 7060254 7062723 LSH
Lan20g0682 20 5421506 5431514 Lan9g0472 9 7029907 7032556 PCT