Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0468 ATGGCATCACAAGATTTAGCCACTCAATTAACAGCACTTGTTGTAGATGACAATATGATGAACAGAAAAATTCATCAAAAGATATTGAAAAATGCTGGAGTTAAAAATCATGGAGTTGGAAATGGCAAAGAAGCTGTAGATATTCATTCCTATGGACAAAGCTTTGACCTAATTTTCATGGATATGGATATGCCAATCATGAATGGCATTGAGGCAACAAAGAAACTTCGATCAATGGGAATTTGTAGCATAATTGTTGGTGTGTCATCGCGTTATATGGAAGAAGAGATACAAGAATTTATGGAAGCTGGGCTTGATGATTATCAAGTAAAACCATTGACAATTGCTAAGCTTAGTTCAATTCTTCATAAGATCAACTTAAAAGTGTAA 390 0.341 MASQDLATQLTALVVDDNMMNRKIHQKILKNAGVKNHGVGNGKEAVDIHSYGQSFDLIFMDMDMPIMNGIEATKKLRSMGICSIIVGVSSRYMEEEIQEFMEAGLDDYQVKPLTIAKLSSILHKINLKV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0468 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 128 - -
Lan9g0468 129 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Lan9g0468 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 128 - -
Lan9g0468 129 SUPERFAMILY CheY-like 10 124 IPR011006 -
Lan9g0468 129 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Lan9g0468 129 SMART REC_2 10 122 IPR001789 GO:0000160
Lan9g0468 129 Gene3D - 1 128 - -
Lan9g0468 129 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0468 Lan-Chr9 6985006 6986170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0468 10 122 Response Regulator Gene Family AT3G04280 46.957 1.53e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g0468 Response_reg 1.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0468 - - adu:107491646 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0468 9 6985006 6986170 Lan5g1222 5 26077934 26079380 LSH