Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0467 ATGGAACCTCATCAATTAACAGCACTTATTGTTGATGATGACATGATGATTAGAATGATTCATAGAAAAATGTTAAGCAATATTGGAGTGAGAAATCAAGCTGTGCAGAATGGAAAAGAAGCAATAGACCTTCATCACTCTGGAAAAAGCTTTGATCTTATTCTCATGGATAAGGATATGCCTGTTATGAATGGGGTTGAGGCAACAAAGAAGCTAAGATCAATGGGGATTCATAGCATGATTGCTGGTGTATCAAGCTCAGTAGAACAACATATACCAGAATTTATTGAAGCAGGACTAGATACATATCTAGAGAAGCCATTAAACACTGATAAGCTCACTTCAATCATTCATCAGATTATACATTAA 369 0.3523 MEPHQLTALIVDDDMMIRMIHRKMLSNIGVRNQAVQNGKEAIDLHHSGKSFDLILMDKDMPVMNGVEATKKLRSMGIHSMIAGVSSSVEQHIPEFIEAGLDTYLEKPLNTDKLTSIIHQIIH* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0467 122 CDD REC_hyHK_CKI1_RcsC-like 9 117 - -
Lan9g0467 122 ProSiteProfiles Response regulatory domain profile. 7 121 IPR001789 GO:0000160
Lan9g0467 122 SUPERFAMILY CheY-like 4 121 IPR011006 -
Lan9g0467 122 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 120 - -
Lan9g0467 122 Gene3D - 3 122 - -
Lan9g0467 122 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 120 - -
Lan9g0467 122 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
Lan9g0467 122 SMART REC_2 6 117 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0467 Lan-Chr9 6972849 6974002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0467 6 121 Response Regulator Gene Family AT3G04280 47.059 5.50e-29 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g0467 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0467 - - qsu:112028165 157.918