Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0457 ATGAGTCAGTTCTTGAAGCCGGAGAATGCTCTCAAAAGGGCAGAAGAATTGATAAACGTTGGGCAGAAGCAAGATGCTTTGCAGACACTTCATGACCTAATTACTTCGAAAAGGTACCGAGCATGGCAGAAGACACTCGAAAAGATCATGCTCAAGTACATAGACCTATGTGTAGAAATGCGTAAAGGTCGGTATGCTAAGGATGGTCTCATTCAGTATCGTATCATATGTCAGCAAGTCAATGTTGGTTCATTGGAGGAGGTGATCAAGCATTTCATTCACCTCTCCACCGAGAAAGCTGAACATGCCCGGAGCCAAGCAGAGGAGTTGGAAGCAGCTCTCGATGTTGATGATTTGGAGGCTGATAAAAAGCCTGAGGATTTGATGCTCAGTTATGTCAGTGGAGAAAAAGGAAAGGAGAGATCCGACCGGGAGCTTGTTACCCCGTGGTTTAAGTTTCTCTGGGAAACATACAGGACCGTGCTTGAAATTTTACGAAACAACTCAAAACTGGAAGCTCTATATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACAACTGAGTTCCGCAGACTCTGTGAAATCATAAGAAACCACTTGGCCAATCTGAATAAGTACCGTGACCAACGAGACCGGCCTGATCTTTCTGCTCCTGAAAGCTTGCAACTGTATCTCGATACAAGATTTGAGCAGCTGAAAATTGCAACTGAACTTGGACTCTGGCAGGAAGCTTTTCGATCAGTTGAAGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCGAAGGCATCCTTGTTGGTTGTTTACTATGCTAAGCTGACCGAAATATTTTGGATATCTTCAAGTCATCTATATCATGCATATGCATGGTTCAGGCTCTTTGTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTGATAGCTTCATCCGTTGTTCTAGCAGCACTTTCAGTTCCTCCTCATGATCACACTCATGGTGCATCTCATCTTGAACTGGAGCATGAAAAGGAGAGAAATTTGAGGATGGCTAACCTCATTGGCTTTAATCTTGAAACTAAACCTGAAAGCAGAGAAGTGCTTTCCAGGTCATCGCTTCTCGCCGAACTGGTATCCAAGGGCGTGATGTCATATGTAACTCAGGAAGTGAAGGACATTTACCATCTTCTTGAACATGAATTTCTTCCTTCAGATCTTGCATTAAAAGTGCAGCCGTTGTTTACCAAAATCTCGAAGTTAGGGGGTAAGCTTTCTACTGCTTCATCTGTCCCAGAGGTGCAATTGTCTCAGTATGTTCCAGTACTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTCTACCAGACAATGAAGATCGAGACCTTATCTGGGATGATCCCCTTCTTTGATTTTTCAGTAGTGGAAAAGATTTCTGTGGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTCGATCACGTGAAAAATGTCGTAATTTTCTGCAAAGTGAGTCTTGAGTCTGATGGCTTAAGGGATCACCTGGCCAATTTTGCTGAGCAATTGAACAAGGCGAGACAAATGATTTATCCTCCAGAGAGGAAGCCTTCAAAACTTGGAGCTTTACTTCCCTCTTTGACAGATGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATCGAGAAGAGGAAAGAAGAACAAGAGCGACAGCTTCTTGAAAAGGAACGTGAGGAAGAGTCGAAGAGGTTAAAACTGCAGAAAATAACTGAAGAAGCTGAGCAAAGAAGACTTGCCGCTGAGTTTGAGCAGAGGAAGAATCAAAGGATCCTCAGGGAAATTGAAGAAAGACAATTGGAGGAAACTCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATTGAGGGGGATAAAATGTCCAAGCAGACTCTGATGGAGTTGGCTTTGACTGAACAAGTCCGAGAAAGACAGGAAATGGAGAAGAAACTGCAAAAATTAGCTAAGACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAGGCCGCACCTATTATTGATGCTGCATATCAACAGCGCCTAGTTGAAGAGAGGATTCTTCACGAGCATGAGCAACAAAAAGAGGTCGAACTGAGCCAACAGCGCCATGAAGGAGATCTTTTGGAGAAGGAGAGGCTTGTTCGAATGATAGGCAATAAAGAGATATATCAAGAGAGAGTTGTCAGTCATCGTCAAGCAGAATTTAACAGATTGAGACGGGAAAGGGAGGAGCGCATCTCTCGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAGTTTTATCTGAAGTTAGAAGAAGAGAGACAGGAAAAATTGCGCGCAGAGGAAGAGGCACGGAAACTAGAAGAGGCTGAAAGGCGAAAGAAGGAAGAGGCTGAACGCCTGGCGAAATTAGCTGAGATAGCTGAAAAGCAGAGACAGAGAGAACAGGAACTTGAAGAAAAGGAGAGAAAGAGAAGAGAAGAATTGTTGGGCCGAACCACTGAAGCAGCTTTGAAGACTTCTGAGCCTCTTGCTCGTCCACCCGACTCTGTATCCGCTGCTCCTGCTGCAGCTGCAGCTGCTGCAGCACCCACTGCTGGGAAATATGTTCCAAAGTTCCGGCGTGAGAGGACTGAAGGCACAGGTGCTGCTGCTCCTCCTCCGGAAACAGATCGTTGGACTAAGCCAGACAGTGGTGACAGGTGGCGTAGTGGTGACGATAGGAGACCCTCTGCATTTGGTTCTGGTTCAAGAGCATCATCCACTTGGTCATCCTCCAGGAACCGTTAG 2877 0.4435 MSQFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLEKIMLKYIDLCVEMRKGRYAKDGLIQYRIICQQVNVGSLEEVIKHFIHLSTEKAEHARSQAEELEAALDVDDLEADKKPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELGLWQEAFRSVEDIHGLMCLVKKTPKASLLVVYYAKLTEIFWISSSHLYHAYAWFRLFVLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTHGASHLELEHEKERNLRMANLIGFNLETKPESREVLSRSSLLAELVSKGVMSYVTQEVKDIYHLLEHEFLPSDLALKVQPLFTKISKLGGKLSTASSVPEVQLSQYVPVLEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHVKNVVIFCKVSLESDGLRDHLANFAEQLNKARQMIYPPERKPSKLGALLPSLTDVVAKEHKRLLARKSIIEKRKEEQERQLLEKEREEESKRLKLQKITEEAEQRRLAAEFEQRKNQRILREIEERQLEETQALLQEAEKRIKKKGKKPIIEGDKMSKQTLMELALTEQVRERQEMEKKLQKLAKTMDYLERAKREEAAPIIDAAYQQRLVEERILHEHEQQKEVELSQQRHEGDLLEKERLVRMIGNKEIYQERVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKFYLKLEEERQEKLRAEEEARKLEEAERRKKEEAERLAKLAEIAEKQRQREQELEEKERKRREELLGRTTEAALKTSEPLARPPDSVSAAPAAAAAAAAPTAGKYVPKFRRERTEGTGAAAPPPETDRWTKPDSGDRWRSGDDRRPSAFGSGSRASSTWSSSRNR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0457 958 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lan9g0457 958 MobiDBLite consensus disorder prediction 943 958 - -
Lan9g0457 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 931 IPR027512 GO:0005852
Lan9g0457 958 Pfam PCI domain 373 508 IPR000717 -
Lan9g0457 958 MobiDBLite consensus disorder prediction 807 827 - -
Lan9g0457 958 MobiDBLite consensus disorder prediction 839 958 - -
Lan9g0457 958 MobiDBLite consensus disorder prediction 839 862 - -
Lan9g0457 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 909 - -
Lan9g0457 958 SMART PINT_4 441 532 IPR000717 -
Lan9g0457 958 Coils Coil 667 697 - -
Lan9g0457 958 Gene3D - 352 496 - -
Lan9g0457 958 Gene3D - 268 342 - -
Lan9g0457 958 MobiDBLite consensus disorder prediction 922 937 - -
Lan9g0457 958 Coils Coil 561 602 - -
Lan9g0457 958 Coils Coil 610 649 - -
Lan9g0457 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 909 IPR027512 GO:0005852
Lan9g0457 958 Gene3D UVR domain 217 267 - -
Lan9g0457 958 Coils Coil 93 120 - -
Lan9g0457 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lan9g0457 958 Coils Coil 796 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0457 Lan-Chr9 6884681 6891163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0457 1 958 Eukaryotic Initiation Factors Gene Family AT4G11420 71.980 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0457 K03254 - gmx:100803796 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0457 9 6884681 6891163 Lan19g0475 19 6885929 6892516 LSH