Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0456 ATGGATGGTCACACACAAAAATGGTTTGAAAGAATGAAACCATTTCTAGCTGTAGTGTTCTTGCAATTTGGATTTGCTGGCATGGATGTTCTATCAAAAGCTGCATTAAACAAAGGAATGAGCAATTATGTACTTGTTGTGTATCGTCATGCTGTTGCATTCATTGTTATAACCCCTTTTGCAATTATTCTAGACAAGAAAGTGAGGGTGAAGATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGCGTGCTAGAGCCAGTTATTGATCAGAATTTATATTTTTTGGGAATGAAATATACAACAGCAACATTTGCAGCAGCAATGAGCAATATGCTTCCTGCCATTACCTTTGTCATGGCTTGCATTATTAGGATTGAGAAGATAAACATAAAACATATACGAAGCCAAGCTAAGGTGGTTGGAACTATAGCCACTGCAGCAGGTGCTATGGTCATGACATTGTTAAAAGGACCAATAGTTGAAATGTTTGGGACACATGGAAACAATAACCATAACCAGCAAAATAGTGGGTCCAATCTTCAACATGCAATAAAGGGTTCAATAATGATCACAATTGGATGCTTTAGTTGGGCTGGTTTCATGGTTCTCCAATCTATTACTCTTGAAGCCTACCCTGCAGAACTATCTCTTACAGCATGGATATGTTTATTGGGAACCATTGAAGGTGGTATAGTGGCCCTTGTTATGGAAAGGGGTAACCCTTCTATTTGGTCTTTAAATTGGGATACAAAACTACTAGCTGCTGTCTATAGTGGTATAGTGTGTTCAGGACTGGCTTATTACATACAAGGAGTAGTGATGAGAACTAGAGGCCCTGTCTTTGTTACAGCATTTAGTCCTCTATGCATGGTAATTGTGGCCATCTTGGGTTCCTTTATTCTGGCTGAGCAAATGTTCCTTGGAAGGGTTATTGGTGCCATTATCATTATTTTTGGGCTATACCTTGTGGTATGGGGTAAGAGCAAAGATTACAACCCACCAAGTCCAATAATCAAAGAGCTGAGTCCAATTACTTCAGAGCAAATATTACCAACAAAGCAAATTGTAGAAGAGGGTAATGCAACAAAGGAGCAATTTGCAATCATAGCTAGAGATGAACAAGTTTGA 1134 0.388 MDGHTQKWFERMKPFLAVVFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHAVAFIVITPFAIILDKKVRVKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFVMACIIRIEKINIKHIRSQAKVVGTIATAAGAMVMTLLKGPIVEMFGTHGNNNHNQQNSGSNLQHAIKGSIMITIGCFSWAGFMVLQSITLEAYPAELSLTAWICLLGTIEGGIVALVMERGNPSIWSLNWDTKLLAAVYSGIVCSGLAYYIQGVVMRTRGPVFVTAFSPLCMVIVAILGSFILAEQMFLGRVIGAIIIIFGLYLVVWGKSKDYNPPSPIIKELSPITSEQILPTKQIVEEGNATKEQFAIIARDEQV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0456 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 153 - -
Lan9g0456 377 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Lan9g0456 377 Pfam EamA-like transporter family 16 135 IPR000620 GO:0016020|GO:0016021
Lan9g0456 377 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Lan9g0456 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
Lan9g0456 377 PANTHER WAT1-RELATED PROTEIN 9 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0456 Lan-Chr9 6858633 6865121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0456 10 376 Nodulin-like Gene Family AT2G37460 62.331 1.49e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0456 - - gmx:100777050 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0456 9 6858633 6865121 Lan5g1208 5 26002949 26007566 LSH
Lan9g0456 9 6858633 6865121 Lan11g1386 11 21465733 21468260 PCT
Lan11g1386 11 21465733 21468260 Lan9g0456 9 6858633 6865121 PCT