Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0422 ATGGAAGCTATAACAAAAACCAATGGCCACTACCAAAATGGTTCATTATGCTTGAATACAAGCACTACTACTAATGGATCAAATATTAATAATGACCCTCTCAATTGGGGTGTGGCTGCTGAGTCACTAAAGGGTAGCCACCTAGATGAGGTGAAGCATATGGTAGCTGAATACCGGAAGCCTATGGTCAAGCTTGGCGGCGAGACACTCACCATATCTCAAGTGGCTGCCATCGCCGCCAAGGACCGAGGCGTCCGAGTAGAGCTATCGGAATCAGCTAGGGCTGGTGTGAAAGCAAGTAGTGAATGGGTGATGGAGAGTATGAATAATGGAACAGATAGTTATGGTGTCACTACTGGCTTTGGTGCTACTTCTCATAGAAGAACTAAACAAGGTGGTGCTTTGCAAAAGGAGCTTATAAGGTTTTTGAATGCTGGTATATTTGGAAATGGAACAGAATCAACTCACACATTGCCACAAAGTGCAACAAGAGCAGCAATGTTAGTGAGAATCAACACTCTTCTTCAAGGCTACTCTGGCATTAGATTTGAAATCTTAGAAGCCATTACCAAACTCCTTAACAACAACATCACCCCTTGTTTACCACTTCGCGGTACGATAACGGCTTCGGGTGATCTTGTCCCTCTTTCCTACATTGCTGGTTTATTAACTGGAAGACCAAATTCCAAGGCCATTGGACCCAAAGGAGAGGTTCTTAATGCTAAACAAGCTTTCGAAGTTGCTGGTATCAACTCTGGTTTCTTCGAATTGCAGCCGAAGGAAGGACTTGCACTTGTTAATGGCACTGCTGTTGGTTCTGGCTTAGCTTCTATTGTTCTATTTGAAGCAAATGTTATAGGTGTGCTAGCTGAAGTTTTATCAGCTATTTTTGCTGAAGTGATGCAAGGAAAACCCGAATTTACTGACCATTTGACACATAAGTTGAAGCACCATCCTGGTCAGATTGAGGCTGCTGCAATTATGGAACACATTTTGGATGGAAGTTCATACATGAAAGATGCTAAGAAGTTGCATGAGGTTGATCCTTTGCAGAAACCGAAACAGGATCGTTACGCGCTTAGAACTTCACCACAATGGCTTGGTCCTCTTATTGAGGTCATTAGATTCTCAACAAAGTCAATTGAGAGAGAGATTAACTCTGTCAATGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCCTTGCATGGTGGTAATTTCCAAGGAACTCCTATTGGAGTCTCTATGGATAATACACGTTTGGCTCTTGCATCGATCGGAAAACTCATGTTTGCGCAATTTTCCGAGCTTGTCAACGATTTTTACAACAACGGGTTGCCTTCAAATCTCACCGCTAGTAGAAATCCGAGCTTGGACTATGGTTTCAAGGGAGCTGAAATCGCGATGGCTTCATATTGTTCCGAGCTTCAGTATCTTGCGAATCCGGTCACAACTCATGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCCTCTAGAAAAACAAATGAAGCTATTGAGATCCTGCAGCTTATGAGTTCAACGTTCTTGATTGCGCTTTGCCAAGCAATCGACTTGAGGCATTTGGAGGAGAATTTGAAAAACGCGGTCAAGAACACGGTTAGCCAAGTTTCGAAGAGGACTCTTACCACAGGAATCAATGGTGAACTCCACCCTTCAAGGTTTTGTGAGAAAGATTTGCTCAAAGTGGTTGATAGAGAGCATGTATTTACCTACATTGATGACCCTTGCAGTGCAACATACCCTTTGATGCAAAAACTTCGGCAAGTGCTAGTGGATCATGCACTAGCAAATGCAGAGAATGAGAAGGACTTAAGCACATCAATATTTCAAAAGATTGAAACATTTGAGGACGAGTTAAAGGTGATTTTGCCGAAAGAAGTCGAGAGTGCAAGGGCTGCATATGAGAGTGGTAATTCGACAATTCCGAACAAGATCATCGAATGCCGATCTTACCCGTTGTACAAGTTTGTGAGAGAGGAGTTAGGGAGTGAGTTGCTAACAGGAGAAAAGGTAAGGTCACCAGGTGAAGAATGTGACAAACTATTCATAGCAATGTGCCATGGTAGAATTATTGATCCTCTTTTGGAATGCCTTGGAGAATGGAATGGTGCTCCTCTTCCAATTTCTTAG 2172 0.4273 MEAITKTNGHYQNGSLCLNTSTTTNGSNINNDPLNWGVAAESLKGSHLDEVKHMVAEYRKPMVKLGGETLTISQVAAIAAKDRGVRVELSESARAGVKASSEWVMESMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESTHTLPQSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPKGEVLNAKQAFEVAGINSGFFELQPKEGLALVNGTAVGSGLASIVLFEANVIGVLAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILQLMSSTFLIALCQAIDLRHLEENLKNAVKNTVSQVSKRTLTTGINGELHPSRFCEKDLLKVVDREHVFTYIDDPCSATYPLMQKLRQVLVDHALANAENEKDLSTSIFQKIETFEDELKVILPKEVESARAAYESGNSTIPNKIIECRSYPLYKFVREELGSELLTGEKVRSPGEECDKLFIAMCHGRIIDPLLECLGEWNGAPLPIS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0422 723 Gene3D - 536 657 IPR023144 -
Lan9g0422 723 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 22 722 - -
Lan9g0422 723 Gene3D Fumarase/aspartase (Central domain) 270 718 - -
Lan9g0422 723 Pfam Aromatic amino acid lyase 70 548 IPR001106 -
Lan9g0422 723 CDD PAL-HAL 68 533 IPR001106 -
Lan9g0422 723 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 32 712 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lan9g0422 723 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 205 221 IPR022313 GO:0016841
Lan9g0422 723 PANTHER HISTIDINE AMMONIA-LYASE 22 722 IPR001106 -
Lan9g0422 723 Gene3D - 23 269 IPR024083 -
Lan9g0422 723 SUPERFAMILY L-aspartase-like 32 722 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0422 Lan-Chr9 6099281 6102171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0422 6 722 Monolignol Biosynthesis Gene Families AT2G37040 81.729 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0422 K10775 - gmx:100787902 1272.69