Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0415 | ATGCAAATGTCACAAGAAGAAGATTCTTGTTCCAACACTATTGAGCAATGGAAATGGTCTGAAATGCAAGGCATTGAGCTTAATTCTCAATCTCACACACCACACCAAGAAATGGATACTTCTCTATCTCAAAAACCCAACAAAGATGTTGATGGTGTTCTTGATGATGCTATTGGTAATGGTGGTGATGGTAAGAACAATGATGGTAGTGGAGTGAAGAAGAAAACAAAGGTTGAGAGTGTTCATCCTACAGGGTTTGTTAGCCTTTTCAGATTTGCTGATGGGTTGGATTACATTCTCATGGCAATTGGAACTGTTGGAGCTGTTGTACATGGTTGTTCTTTGCCTCTTTTCCTTCGATTCTTCGCCGATCTTGTTAATTCTTTCGGTTCCAATGCTAATGATGTTAACAAAATGACCCAGGAAGTTGTCAAGTATGCATTTTACTTCCTTGTGGTTGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATTTCATGTTGGATGTGGACCGGGGAGCGCCAATCAACGAAGATGAGGATCGAGTACTTGGAAGCTGCTTTGAACCAGGACATTCAGTTCTTCGACACTGAGGTTCGAACATCCGATGTTGTTTTCGCCATCAATACCGATGCTGTCATGGTCCAAGATGCTATCAGTGAGAAGTTGGGTAATTTCATCCACTATATGGCAACATTTGTTTCTGGTTTTGTTGTGGGTTTCACTGCTGTATGGCAATTGGCTCTAGTAACCCTTGCTGTAGTCCCTATGATAGCTGTGATTGGAGCCGTTCACACCATCACCTTGGCCAAGCTCTCTGGAAAAAGCCAGGAATCTCTTTCTCAAGCCGGCAACATCGCGGAACAGACGGTTGCACAAGTTCGAGTCGTACTGGCCTTTGTTGGAGAGTCGAGAGCATTGCAGGCCTACTCATCAGCATTGAAGGTTGCTCAGAAGCTTGGTTACAAAACTGGTTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGCTGTTATGCGCTTCTGCTATGGTATGGAGGTTATCTAGTTAGGCACGGCTATACCAACGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGTGGATTGGGTTTAGGCCAGTCTGCGCCAAGCATGGCTGCATTTACCAAAGCTAGAGTTGCTGCAGCCAAAATTTTCCATATAATTGATCACAAGCCGAGTATAGACCGAAACAGTGAATCTGGCTTGGAACTAGAGGGTATTATGGGACTTGTGGAGCTGAAAAATGTAGATTTTTCATATCCATCGAGACCAGACGTTCGGATCCTCGACGATTTTTCCTTGAATGTGTCTTCTGGCAAGACTATAGCTTTGGTGGGTAGCAGTGGTTCCGGCAAGAGTACAGTTGTTTCCCTCATTGAAAGATTTTATGACCCAACTTCAGGACAAGTTCTGTTAGATGGGCATGACATAAAAACATTGAAGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAACCGGCGCTATTTGCTACGACAATTCGAGAAAATATACTATTGGGCAGGCCAGATGCAGACCAGGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGGCTTCAACTTTCAGGAGGACAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCACTGGACTCTGAGTCCGAAAAGCTGGTGCAAGAAGCCCTTGATCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATTCGCAAAGCCGATCTTGTAGCTGTACTTCAGCTAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTATTTTCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCGCATGAAACTGCTATGAGTAATGCAAGAAAGAGTAGTGCAAGACCTTCAAGTGCGAGAAACTCTGTAAGCTCACCCATAATTACTCGAAATTCTTCTTATGGCCGGTCACCATACTCACGCAGGCTGTCCGATTTCTCCACTTCTGATTTTAGTCTGTCCCTTGATGCATCACATCCAAATTACAGGCACGAAAAGCTTGCATTCAAAGAGCAAGCCAGTTCTTTCTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTTTATGCTTTTATTGGCTCTATAGGTTCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTGTATTACAATCCAGACCACGGATTCATGATCCGACAAATAGAGAAGTACTGCTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTCAACACATTGCAACACTTCTTTTGGGATATTGTTGGGGAAAATCTCACAAAACGAGTGAGGGAGAAAATGCTGACGGCAGTGCTACAAAATGAAATGGCGTGGTTCGATCAGGAGGAAAACGAGAGTGGCAGGATTGCTGCTAGGCTCTCTCTCGACGCCAATAATGTCAGATCAGCAATTGGAGATAGAATTTCAGTAATTGTGCAGAACACTGCACTTATGTTAGTTGCTTGCACTGCAGGGTTTGTGTTGCAATGGCGCCTCGCCCTTGTCCTTGTAGCTGTCTTCCCTGTTGTTGTTGCCGCCACTGTTTTACAGAAAATGTTCATTACTGGTTTTTCTGGTGACATGGAAGCTGCTCATGCCAAGGCCACACAGCTAGCAGGAGAGGCTATAGCCAATGTGAGAACTGTTGCAGCATTCAATTCAGAAAGAAAAATTGTTCGCCTTTTCACATCCAACCTTCAAACTCCGCTAAAACGGTGCTTCTGGACGGGGCAAATCTCTGGAATTGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACAGCATCTCTGATTTCTCTAAAACAATCCAAGTTTTTATGGTTCTCATGGTCTCTGCTAATGGTGCTGCTGAAACCTTAACCCTGGCTCCTGACTTCATCAAGGGAGGTAGAGCCATGAGGTCAGTCTTTGAGCTCCTTGACCGCAGAACTGAAATTGAGCCAGATGATCCGGATGCTACACCTGTACCTGATCGCCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCTTATCCTACTCGACCAGACATGCCAGTTTTTCGTGACCTTAGTCTTCGTGCAAGAGCAGGTAAGACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAAAGTTCAGTCATTGCACTTATACAACGATTCTATGATCCGACATCCGGCCGGGTCATGATTGATGGAAAGGACATCAGGAAATACAACCTTAAGTCCCTAAGAAGGCACATTTCAGTGGTACCGCAGGAGCCATGCCTGTTCGCAACTACTATTTATGAAAACATTGCTTATGGTCATGACTCAGCTACTGAAGCTGAGATAATTGAAGCAGCAACTCTTGCTAATGCACACAAGTTCATATCATCCCTGCCAGATGGATACAAAACATTTGTCGGCGAGAGAGGGGTTCAACTATCCGGGGGACAAAAACAGCGAATAGCAGTTGCTCGCGCTTTTGTGAGGAAGGCTGAGCTTATGCTACTTGATGAGGCAACAAGTGCGCTTGATGCTGAATCCGAGAGGTCTGTTCAAGAGGCGCTAGACCGTGCCTCGTCGGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATCAGAAATGCTAATGTGATTGCTGTGATTGATGATGGGAAAGTAGCTGAGCAAGGTTCACATTCACATTTGTTGAAAAATTACCCGGATGGGATTTATGCAAGGATGACTCAACTACAAAGGTTCACACACAATCAAGTCATTGGAATGGCCTCAGGCTCAAGTTCTTCAATGAGACCAAAAGATGATGACAGAGAAGGCTAA | 4041 | 0.4444 | MQMSQEEDSCSNTIEQWKWSEMQGIELNSQSHTPHQEMDTSLSQKPNKDVDGVLDDAIGNGGDGKNNDGSGVKKKTKVESVHPTGFVSLFRFADGLDYILMAIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVNKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIEYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAVHTITLAKLSGKSQESLSQAGNIAEQTVAQVRVVLAFVGESRALQAYSSALKVAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHGYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFHIIDHKPSIDRNSESGLELEGIMGLVELKNVDFSYPSRPDVRILDDFSLNVSSGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQLGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRHEKLAFKEQASSFWRLAKMNSPEWLYAFIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHGFMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLQNEMAWFDQEENESGRIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFITGFSGDMEAAHAKATQLAGEAIANVRTVAAFNSERKIVRLFTSNLQTPLKRCFWTGQISGIGYGIAQFALYASYALGLWYASWLVKHSISDFSKTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLKNYPDGIYARMTQLQRFTHNQVIGMASGSSSSMRPKDDDREG* | 1347 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0415 | 1346 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1071 | 1319 | IPR027417 | - | |
Lan9g0415 | 1346 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 1 | 101 | 1323 | - | - | |
Lan9g0415 | 1346 | SUPERFAMILY | ABC transporter transmembrane region | 744 | 1067 | IPR036640 | GO:0005524|GO:0016021 | |
Lan9g0415 | 1346 | Gene3D | ABC transporter type 1, transmembrane domain | 148 | 1053 | IPR036640 | GO:0005524|GO:0016021 | |
Lan9g0415 | 1346 | SUPERFAMILY | ABC transporter transmembrane region | 89 | 409 | IPR036640 | GO:0005524|GO:0016021 | |
Lan9g0415 | 1346 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1080 | 1316 | IPR003439 | GO:0005524 | |
Lan9g0415 | 1346 | MobiDBLite | consensus disorder prediction | 23 | 47 | - | - | |
Lan9g0415 | 1346 | MobiDBLite | consensus disorder prediction | 671 | 703 | - | - | |
Lan9g0415 | 1346 | Pfam | ABC transporter transmembrane region | 102 | 374 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lan9g0415 | 1346 | Pfam | ABC transporter transmembrane region | 758 | 1027 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lan9g0415 | 1346 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 101 | 398 | - | - | |
Lan9g0415 | 1346 | Gene3D | - | 423 | 688 | IPR027417 | - | |
Lan9g0415 | 1346 | Gene3D | - | 1071 | 1326 | IPR027417 | - | |
Lan9g0415 | 1346 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 102 | 390 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lan9g0415 | 1346 | MobiDBLite | consensus disorder prediction | 23 | 76 | - | - | |
Lan9g0415 | 1346 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 101 | 1323 | IPR039421 | - | |
Lan9g0415 | 1346 | CDD | ABC_MTABC3_MDL1_MDL2 | 1080 | 1319 | - | - | |
Lan9g0415 | 1346 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 746 | 1062 | - | - | |
Lan9g0415 | 1346 | CDD | ABC_MTABC3_MDL1_MDL2 | 425 | 664 | - | - | |
Lan9g0415 | 1346 | ProSitePatterns | ABC transporters family signature. | 1219 | 1233 | IPR017871 | GO:0005524 | |
Lan9g0415 | 1346 | ProSitePatterns | ABC transporters family signature. | 564 | 578 | IPR017871 | GO:0005524 | |
Lan9g0415 | 1346 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 418 | 664 | IPR027417 | - | |
Lan9g0415 | 1346 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 757 | 1044 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lan9g0415 | 1346 | SMART | AAA_5 | 452 | 638 | IPR003593 | - | |
Lan9g0415 | 1346 | SMART | AAA_5 | 1107 | 1299 | IPR003593 | - | |
Lan9g0415 | 1346 | Pfam | ABC transporter | 1099 | 1247 | IPR003439 | GO:0005524 | |
Lan9g0415 | 1346 | Pfam | ABC transporter | 443 | 592 | IPR003439 | GO:0005524 | |
Lan9g0415 | 1346 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 425 | 661 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0415 | Lan-Chr9 | 6013858 | 6020294 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0415 | 66 | 1343 | Calmodulin-binding Proteins | AT2G36910 | 87.481 | 0.0 | 2295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0415 | K05658 | - | gmx:100814667 | 2298.09 |