Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0415 ATGCAAATGTCACAAGAAGAAGATTCTTGTTCCAACACTATTGAGCAATGGAAATGGTCTGAAATGCAAGGCATTGAGCTTAATTCTCAATCTCACACACCACACCAAGAAATGGATACTTCTCTATCTCAAAAACCCAACAAAGATGTTGATGGTGTTCTTGATGATGCTATTGGTAATGGTGGTGATGGTAAGAACAATGATGGTAGTGGAGTGAAGAAGAAAACAAAGGTTGAGAGTGTTCATCCTACAGGGTTTGTTAGCCTTTTCAGATTTGCTGATGGGTTGGATTACATTCTCATGGCAATTGGAACTGTTGGAGCTGTTGTACATGGTTGTTCTTTGCCTCTTTTCCTTCGATTCTTCGCCGATCTTGTTAATTCTTTCGGTTCCAATGCTAATGATGTTAACAAAATGACCCAGGAAGTTGTCAAGTATGCATTTTACTTCCTTGTGGTTGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATTTCATGTTGGATGTGGACCGGGGAGCGCCAATCAACGAAGATGAGGATCGAGTACTTGGAAGCTGCTTTGAACCAGGACATTCAGTTCTTCGACACTGAGGTTCGAACATCCGATGTTGTTTTCGCCATCAATACCGATGCTGTCATGGTCCAAGATGCTATCAGTGAGAAGTTGGGTAATTTCATCCACTATATGGCAACATTTGTTTCTGGTTTTGTTGTGGGTTTCACTGCTGTATGGCAATTGGCTCTAGTAACCCTTGCTGTAGTCCCTATGATAGCTGTGATTGGAGCCGTTCACACCATCACCTTGGCCAAGCTCTCTGGAAAAAGCCAGGAATCTCTTTCTCAAGCCGGCAACATCGCGGAACAGACGGTTGCACAAGTTCGAGTCGTACTGGCCTTTGTTGGAGAGTCGAGAGCATTGCAGGCCTACTCATCAGCATTGAAGGTTGCTCAGAAGCTTGGTTACAAAACTGGTTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGCTGTTATGCGCTTCTGCTATGGTATGGAGGTTATCTAGTTAGGCACGGCTATACCAACGGAGGACTTGCCATTGCAACCATGTTTGCTGTTATGATTGGTGGATTGGGTTTAGGCCAGTCTGCGCCAAGCATGGCTGCATTTACCAAAGCTAGAGTTGCTGCAGCCAAAATTTTCCATATAATTGATCACAAGCCGAGTATAGACCGAAACAGTGAATCTGGCTTGGAACTAGAGGGTATTATGGGACTTGTGGAGCTGAAAAATGTAGATTTTTCATATCCATCGAGACCAGACGTTCGGATCCTCGACGATTTTTCCTTGAATGTGTCTTCTGGCAAGACTATAGCTTTGGTGGGTAGCAGTGGTTCCGGCAAGAGTACAGTTGTTTCCCTCATTGAAAGATTTTATGACCCAACTTCAGGACAAGTTCTGTTAGATGGGCATGACATAAAAACATTGAAGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAACCGGCGCTATTTGCTACGACAATTCGAGAAAATATACTATTGGGCAGGCCAGATGCAGACCAGGTTGAGATTGAAGAAGCTGCCAGGGTTGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGGCTTCAACTTTCAGGAGGACAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTGAAAAACCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCACTGGACTCTGAGTCCGAAAAGCTGGTGCAAGAAGCCCTTGATCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATTCGCAAAGCCGATCTTGTAGCTGTACTTCAGCTAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTATTTTCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATAAAGATGCAGGAGATGGCGCATGAAACTGCTATGAGTAATGCAAGAAAGAGTAGTGCAAGACCTTCAAGTGCGAGAAACTCTGTAAGCTCACCCATAATTACTCGAAATTCTTCTTATGGCCGGTCACCATACTCACGCAGGCTGTCCGATTTCTCCACTTCTGATTTTAGTCTGTCCCTTGATGCATCACATCCAAATTACAGGCACGAAAAGCTTGCATTCAAAGAGCAAGCCAGTTCTTTCTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTTTATGCTTTTATTGGCTCTATAGGTTCTGTTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTGTATTACAATCCAGACCACGGATTCATGATCCGACAAATAGAGAAGTACTGCTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTCAACACATTGCAACACTTCTTTTGGGATATTGTTGGGGAAAATCTCACAAAACGAGTGAGGGAGAAAATGCTGACGGCAGTGCTACAAAATGAAATGGCGTGGTTCGATCAGGAGGAAAACGAGAGTGGCAGGATTGCTGCTAGGCTCTCTCTCGACGCCAATAATGTCAGATCAGCAATTGGAGATAGAATTTCAGTAATTGTGCAGAACACTGCACTTATGTTAGTTGCTTGCACTGCAGGGTTTGTGTTGCAATGGCGCCTCGCCCTTGTCCTTGTAGCTGTCTTCCCTGTTGTTGTTGCCGCCACTGTTTTACAGAAAATGTTCATTACTGGTTTTTCTGGTGACATGGAAGCTGCTCATGCCAAGGCCACACAGCTAGCAGGAGAGGCTATAGCCAATGTGAGAACTGTTGCAGCATTCAATTCAGAAAGAAAAATTGTTCGCCTTTTCACATCCAACCTTCAAACTCCGCTAAAACGGTGCTTCTGGACGGGGCAAATCTCTGGAATTGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACAGCATCTCTGATTTCTCTAAAACAATCCAAGTTTTTATGGTTCTCATGGTCTCTGCTAATGGTGCTGCTGAAACCTTAACCCTGGCTCCTGACTTCATCAAGGGAGGTAGAGCCATGAGGTCAGTCTTTGAGCTCCTTGACCGCAGAACTGAAATTGAGCCAGATGATCCGGATGCTACACCTGTACCTGATCGCCTTCGTGGTGAAGTTGAACTTAAGCATGTAGACTTCTCTTATCCTACTCGACCAGACATGCCAGTTTTTCGTGACCTTAGTCTTCGTGCAAGAGCAGGTAAGACTCTTGCCCTTGTAGGACCTAGTGGCTGTGGTAAAAGTTCAGTCATTGCACTTATACAACGATTCTATGATCCGACATCCGGCCGGGTCATGATTGATGGAAAGGACATCAGGAAATACAACCTTAAGTCCCTAAGAAGGCACATTTCAGTGGTACCGCAGGAGCCATGCCTGTTCGCAACTACTATTTATGAAAACATTGCTTATGGTCATGACTCAGCTACTGAAGCTGAGATAATTGAAGCAGCAACTCTTGCTAATGCACACAAGTTCATATCATCCCTGCCAGATGGATACAAAACATTTGTCGGCGAGAGAGGGGTTCAACTATCCGGGGGACAAAAACAGCGAATAGCAGTTGCTCGCGCTTTTGTGAGGAAGGCTGAGCTTATGCTACTTGATGAGGCAACAAGTGCGCTTGATGCTGAATCCGAGAGGTCTGTTCAAGAGGCGCTAGACCGTGCCTCGTCGGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATCAGAAATGCTAATGTGATTGCTGTGATTGATGATGGGAAAGTAGCTGAGCAAGGTTCACATTCACATTTGTTGAAAAATTACCCGGATGGGATTTATGCAAGGATGACTCAACTACAAAGGTTCACACACAATCAAGTCATTGGAATGGCCTCAGGCTCAAGTTCTTCAATGAGACCAAAAGATGATGACAGAGAAGGCTAA 4041 0.4444 MQMSQEEDSCSNTIEQWKWSEMQGIELNSQSHTPHQEMDTSLSQKPNKDVDGVLDDAIGNGGDGKNNDGSGVKKKTKVESVHPTGFVSLFRFADGLDYILMAIGTVGAVVHGCSLPLFLRFFADLVNSFGSNANDVNKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIEYLEAALNQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAVHTITLAKLSGKSQESLSQAGNIAEQTVAQVRVVLAFVGESRALQAYSSALKVAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHGYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFHIIDHKPSIDRNSESGLELEGIMGLVELKNVDFSYPSRPDVRILDDFSLNVSSGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQLGSVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRHEKLAFKEQASSFWRLAKMNSPEWLYAFIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHGFMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLQNEMAWFDQEENESGRIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFITGFSGDMEAAHAKATQLAGEAIANVRTVAAFNSERKIVRLFTSNLQTPLKRCFWTGQISGIGYGIAQFALYASYALGLWYASWLVKHSISDFSKTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLKNYPDGIYARMTQLQRFTHNQVIGMASGSSSSMRPKDDDREG* 1347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0415 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1071 1319 IPR027417 -
Lan9g0415 1346 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 101 1323 - -
Lan9g0415 1346 SUPERFAMILY ABC transporter transmembrane region 744 1067 IPR036640 GO:0005524|GO:0016021
Lan9g0415 1346 Gene3D ABC transporter type 1, transmembrane domain 148 1053 IPR036640 GO:0005524|GO:0016021
Lan9g0415 1346 SUPERFAMILY ABC transporter transmembrane region 89 409 IPR036640 GO:0005524|GO:0016021
Lan9g0415 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1080 1316 IPR003439 GO:0005524
Lan9g0415 1346 MobiDBLite consensus disorder prediction 23 47 - -
Lan9g0415 1346 MobiDBLite consensus disorder prediction 671 703 - -
Lan9g0415 1346 Pfam ABC transporter transmembrane region 102 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0415 1346 Pfam ABC transporter transmembrane region 758 1027 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0415 1346 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 398 - -
Lan9g0415 1346 Gene3D - 423 688 IPR027417 -
Lan9g0415 1346 Gene3D - 1071 1326 IPR027417 -
Lan9g0415 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 102 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0415 1346 MobiDBLite consensus disorder prediction 23 76 - -
Lan9g0415 1346 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 101 1323 IPR039421 -
Lan9g0415 1346 CDD ABC_MTABC3_MDL1_MDL2 1080 1319 - -
Lan9g0415 1346 CDD ABC_6TM_Pgp_ABCB1_D2_like 746 1062 - -
Lan9g0415 1346 CDD ABC_MTABC3_MDL1_MDL2 425 664 - -
Lan9g0415 1346 ProSitePatterns ABC transporters family signature. 1219 1233 IPR017871 GO:0005524
Lan9g0415 1346 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524
Lan9g0415 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 664 IPR027417 -
Lan9g0415 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 757 1044 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g0415 1346 SMART AAA_5 452 638 IPR003593 -
Lan9g0415 1346 SMART AAA_5 1107 1299 IPR003593 -
Lan9g0415 1346 Pfam ABC transporter 1099 1247 IPR003439 GO:0005524
Lan9g0415 1346 Pfam ABC transporter 443 592 IPR003439 GO:0005524
Lan9g0415 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0415 Lan-Chr9 6013858 6020294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0415 66 1343 Calmodulin-binding Proteins AT2G36910 87.481 0.0 2295