Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0394 ATGGAACCTAATGGACTAAGTAGTGGAATGTTTCCTAGTATTTCTACTGGATTGCTAGGAGTAGAAAACCCTTCAAAACAACAACAACAACAACAAAACCTTCAAAATCAGCATAACCCTCACCATTTGCATCATCACTCTCAAATTGTTTCCTATGTTTCAAACCATGACACTGACACAAATCCACAACAATCACTCAAACATGGGTATAACCCCTTTTCAGCCAAAACCAACAACAACAACAACAACAAGCCACAAAGCACTAACATGAGTGATGAAGATGATAGCTCCAGTGACAAGAGAAAAGTGTCACCATGGCATAGAATGAAATGGACTGATGCAATGGTAAGGCTCTTAATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTACTTCAGAAGGTACTACTACTCATGATTCCACAGGGAAAAAGAAAGTTTCTGGTTTAATGCTTCAGAAGAAAGGGAAATGGAAATCAGTGTCAAGGGCTATGATGGAAAAAGGGTTTTATGTATCTCCTCAGCAATGTGAAGACAAGTTCAATGACTTGAACAAAAGATACAAAAGAGTCAATGATATTCTAGGAAAAGGAACTGCATGTAGGGTTGTGGAAAATCAAAACTTGATGGATACAATGGATTTATCACCAAAGTTGAAAGAAGAAGTTAGAAAGCTTCTCAACTCCAAACACCTTTTCTTTAGAGAAATGTGTGCTTACCATAATAGTTGTGGTCATGGAAGCAACAACAATAACACTGGTTCTAACTCTACTTTGCAACAATCAGCAGAAGTTATAAGTGTAACTGAGCCATCACAATCTCAGCCAGAACAGCAACAACAGCAACAATGTTTTCATTCATCAGAAAATGGTGTAGGGAATATGAGGATATTGAAAGGAAGAAATGGTGTAGAGTTAGAAGATGATTCTGATGAATCTGATGAGTCTGGTGAGTATTCTGAAGAGGAAGAAGATGAGTCAAATGAAGTTGGATCAAGGGGTCAAGTAGATCATGAAGATGAAACTGAAGTAAGAAAGAGAATAAAGAAAGGAGGGTTATATGTACCATCATCAACAATACAAAATTTGAGTAGTGAGTTAAATGGTGTAGTGCATGATGGAGGAAAAAGTGTTTGGGAGAAAAAAGTGTGGATGAAGAAGAGAATGATGCAGTTAGAGGAGCAGAAAGTGAGTTATGAAGTGGAATCATTTGAGCTTGAAAAACAAAGGTTGAGATGGGTAAGGTATAGTAGTAAGAAAGAGAGAGGAATGGAGAGAGATAAACTTGAGAATGAAAGAAAGAGATTGGAAAATGAGAGAATGGTTTTGATTATTAGACAAATGGAAGTTGAGTTGATGAATGTTCAGAAGCAGAAGCAACAACAGCAGCAACATTCTTCTACCTAG 1407 0.3717 MEPNGLSSGMFPSISTGLLGVENPSKQQQQQQNLQNQHNPHHLHHHSQIVSYVSNHDTDTNPQQSLKHGYNPFSAKTNNNNNNKPQSTNMSDEDDSSSDKRKVSPWHRMKWTDAMVRLLIMAVYYIGDEAGTSEGTTTHDSTGKKKVSGLMLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLMDTMDLSPKLKEEVRKLLNSKHLFFREMCAYHNSCGHGSNNNNTGSNSTLQQSAEVISVTEPSQSQPEQQQQQQCFHSSENGVGNMRILKGRNGVELEDDSDESDESGEYSEEEEDESNEVGSRGQVDHEDETEVRKRIKKGGLYVPSSTIQNLSSELNGVVHDGGKSVWEKKVWMKKRMMQLEEQKVSYEVESFELEKQRLRWVRYSSKKERGMERDKLENERKRLENERMVLIIRQMEVELMNVQKQKQQQQQHSST* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0394 468 MobiDBLite consensus disorder prediction 1 104 - -
Lan9g0394 468 Gene3D - 111 190 - -
Lan9g0394 468 PANTHER F16F4.11 PROTEIN-RELATED 1 468 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 1 38 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 329 347 - -
Lan9g0394 468 Pfam Myb/SANT-like DNA-binding domain 108 239 IPR044822 -
Lan9g0394 468 Coils Coil 389 409 - -
Lan9g0394 468 Coils Coil 419 465 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 48 92 - -
Lan9g0394 468 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 468 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 307 328 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 249 347 - -
Lan9g0394 468 MobiDBLite consensus disorder prediction 249 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0394 Lan-Chr9 5785800 5787485 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan9g0394 Myb_DNA-bind_4 1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0394 - - aprc:113863792 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0394 9 5785800 5787485 Lan8g1208 8 17839490 17842977 PCT
Lan8g1208 8 17839490 17842977 Lan9g0394 9 5785800 5787485 PCT