Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0391 ATGCACCTTACTTTGGTATTGACCTTGGTCTTGGCCTTTCTATGCTTCACACAATCTCAAGCACAAAACAACAATGACACAAATGCCCTCACCCAATTCCACCTCCAAACCGACGCCTACGGCTACCTCCTCCCCAACTGGACCGGCTTCGACGCCTGCGCCGCCGCATGGCGCGGCGTCACATGCTCCCCAAACGGCAGAGTCATTGAACTCTCTCTCCCTTCACTCAACCTCCAAGGACCCATTCATTCTCTTTCAACACTCTCTTATCTCCGATTCCTTGACCTACACGACAACCACTTAAACGGCACCGTTGCACCACTTTCAAACTGCACCAGCCTTGAACTTCTCTACCTCTCCGGTAACAACTTCTCCGGCGAAATTCCGCCGGAGATATCTTCACTTAAACTTCTCCTCCGGCTTGATATTTCTAACAACAACATCAACGGTTCATTACCCAAAGAATTATCACGTTTAACTCATCTTCTTACGTTAAGGTTACAAAACAATGATCTTTCTGGAAATGTTATAGATCTTTCTTCTTCTCTTGTTAACCTAACTGAACTCAACTTCACTAATAATGAACTACACGGGTACTTGCCTGATTCCATGTTTAACAAGTTCGGTAACGCGAGCTTTTTTGGTAATGATGGTCTTTGTGGTTCACCACCATTACCGTTTTGTCATATTTCTCCATCTCCTGAATCAAATAAAACTTTTTCATCTCACCCTAGTTCATTACCTCAAACAAGTGTTCTTGTTCCTTCTTCTTCTAAAGCTCAACAACGCAAATGGTTGAGCCCTGGAGCCATTGTAGGCATAGTGGTAGCTATACCTGTAGTGTTAATGGTGGTGATATCTTTCATTATTGTGCAGTGTTGTGATAGAGAGAAAGAGAGTTCAATGATGGGTAGTGAGAGTGGGAAGAGAAAGAGTGGAAGTAGTGGTAGTGGAAGCAGTGAAAAAAGGGTGTATAACAATAATAATGGTGTTGTTGTTGGAGATAAAGATAGAGATAGTGATGGAACAAATGCTACTGAGAATAATGAAAAAACCAAGCTTGTGTTTTTTGATAGAGGGAATGTGTTTGAGCTTGAGGATCTTCTTCGTGCTTCAGCAGAGATGTTAGGGAAAGGTGGCTTAGGAACAGTTTATAGGGCAGTGGTTGATGAAGGTGTTACTGTTGCTGTGAAGAGGTTAAAGGACACTAACCCCTTTGAGAGGGTAGAGTTTGAACAGTATATGAATGTTGTAGGGAAGGTTAAGCATCCTAATGTTGTTAGGTTAAGAGCTTATTACTATGCTAAGGAAGAAAAGCTTCTTGTTTATGATTATCTTCCCAATGGAAGCTTGCATGCACTTCTTCATGGGAACCGTGGACCAGGAAGAATTCCATTAGATTGGACCACAAGAATGAGCATAGTGTTAGGTGCAGCTAAAGGACTAGCCAGAATTCATGCAGAATATAGTGCAGCAAAGATACCTCATGGCAACATCAAATCTTCCAATGTTCTTCTTGACAAGAATGGTGTTGCATGCATTTCTGACTTTGGTTTATCACTCTTATTGAATCCAATTCAAGCCATAGCAAGATTGGGTGCGTATAAAGCACCAGAACAAGAAGAGTTAAAGACACTGTCTCAAGAAGCTGATGTGTATAGTTTTGGTGTGTTGGTATTGGAAGTTTTAACAGGAAAAGCTCCTTCTAAGTTTCATAACTCAACAAGTAATCGTGCTCCTCGTGTTGAGTTAGAGGAAGAAGATGTCAATGTTGATCTTCCCAAATGGGTTCGTGCAGTTGTCAAGGAAGAAGAATGGACGAAAGAGGTGTTTGATCAGGAACTGTTGAGGTACAAGAACATTGAGGAAGAAATGGTAGCAATGATGAATGTGGGGTTAGCTTGTGTTGTGCCACAACCTGAGATGAGGCCAAACATGTTTGAAATAGCAAAGATGGTTGAGGATATGAGGGTGGAACAATCTCCTCTCAGAGAGTATTATGATGAATCACGAACTTCACTTTCACCTTCTCTTGTCACCACTGAAGATGGGTTAACTAAAGAGTAG 2067 0.419 MHLTLVLTLVLAFLCFTQSQAQNNNDTNALTQFHLQTDAYGYLLPNWTGFDACAAAWRGVTCSPNGRVIELSLPSLNLQGPIHSLSTLSYLRFLDLHDNHLNGTVAPLSNCTSLELLYLSGNNFSGEIPPEISSLKLLLRLDISNNNINGSLPKELSRLTHLLTLRLQNNDLSGNVIDLSSSLVNLTELNFTNNELHGYLPDSMFNKFGNASFFGNDGLCGSPPLPFCHISPSPESNKTFSSHPSSLPQTSVLVPSSSKAQQRKWLSPGAIVGIVVAIPVVLMVVISFIIVQCCDREKESSMMGSESGKRKSGSSGSGSSEKRVYNNNNGVVVGDKDRDSDGTNATENNEKTKLVFFDRGNVFELEDLLRASAEMLGKGGLGTVYRAVVDEGVTVAVKRLKDTNPFERVEFEQYMNVVGKVKHPNVVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRMSIVLGAAKGLARIHAEYSAAKIPHGNIKSSNVLLDKNGVACISDFGLSLLLNPIQAIARLGAYKAPEQEELKTLSQEADVYSFGVLVLEVLTGKAPSKFHNSTSNRAPRVELEEEDVNVDLPKWVRAVVKEEEWTKEVFDQELLRYKNIEEEMVAMMNVGLACVVPQPEMRPNMFEIAKMVEDMRVEQSPLREYYDESRTSLSPSLVTTEDGLTKE* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0391 688 Gene3D Phosphorylase Kinase; domain 1 336 445 - -
Lan9g0391 688 Gene3D Ribonuclease Inhibitor 18 104 IPR032675 -
Lan9g0391 688 MobiDBLite consensus disorder prediction 667 688 - -
Lan9g0391 688 ProSiteProfiles Protein kinase domain profile. 370 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0391 688 Gene3D Transferase(Phosphotransferase) domain 1 446 674 - -
Lan9g0391 688 Pfam Protein kinase domain 374 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0391 688 MobiDBLite consensus disorder prediction 665 688 - -
Lan9g0391 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 678 - -
Lan9g0391 688 SUPERFAMILY L domain-like 24 207 - -
Lan9g0391 688 MobiDBLite consensus disorder prediction 306 327 - -
Lan9g0391 688 SUPERFAMILY Protein kinase-like (PK-like) 374 653 IPR011009 -
Lan9g0391 688 Gene3D Ribonuclease Inhibitor 106 229 IPR032675 -
Lan9g0391 688 MobiDBLite consensus disorder prediction 301 347 - -
Lan9g0391 688 PANTHER LRR RECEPTOR-LIKE KINASE 2 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0391 Lan-Chr9 5762976 5767261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0391 24 682 Receptor kinase-like Gene Family AT2G36570 60.961 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan9g0391 Pkinase 3.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0391 - - gmx:100808402 853.588