Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0381 ATGATGGCTCAAAAGTACTTACATGAGTTACTTGAGGAAGATCAAGAACCATTCATTTTACACAAGTACATTTCAGATAGGCGTAGCAAAATCAAAACACAGATTTACCCACGAAAAACCCACAAACCACTTCATCAAAACTCAAATTTCCCCACGAATCTATGCAAAAACGTGTGCCTTTTCTCATTCCCAGAAACAACAACCCAAGAACTCAGAAAATCTCCACTCTTCGATTTTCAATCTCCTAAAGCCAAATCCAAAAGCCCCATCAAGTTCCAAATCCCTTCTAGAACCGCAAATCTTCTTCTCGAAGCTGCACTTAAGATTCAAAAACACTCTTCTTCTAAAACCAAAAGCAGTGGTTTTAGTCTATTTGGGTCATTGTTCAAGAGACTAACACAAAGAAGCCATAAAAGGAAGGAAATTGAGGGTAGTGACTTGAATTTATGTGTTAAGGATATATTGAAGTGGGAATCAAGAAAACTCTCAAATGGGTGCATGAAAGAACAAGAAAAATTGGATTTTTGCAATGGAAGAAGTAGTAGTGCTGTTTGGTCAGAGAGTAATGAAGATAAATCATTGGATATGGAAACATGGAGTAGTAGCAGTAGTAGACACTGTGATGATGATTGTGAAATAAAAGAGATTGAGTTTGTTACCAATCATCATCATAAGGATAATAGTGAGTGTGCTTGTTGTCATGATATCAATGGGTTCTGTGATAGTCCTTTCTGTTTTGTTCTTCAAAAGAGTCCTTCTTTCGACCGCTATACCTCGGAGCTACCATCGTCGACACCGTCACCAAATCATCATAATACTCAGGACAAAGAAAGTAATGGAGGAGAAGAAGAGAAAGAGGATAAGGAACATTGTAGTCCTGTTTGTGTTTTGGATCCACCCTTCAAGGATGATGAGGAAAGCCATGGAAATGATGAAGAAGATAGTTCTAATTTGAGGTGCAGCTATGCCATAATAGAGAGAGCTAAGCAACAACTATTGTACAAGCTTAGTAGATTCGAGAAACTTGCAGAGTTAGATCCATTAGAACTCGAGAAAAGAATGTTAGAGGACGAAGATGAGAACGACTATGAAACATTAATGGAAAACGACGATTCTGAAGTCGAGGGTAGTGAAACATCATGTAAAGAAAATGAATTTATGCAACTAGTTTTTGAAGCTGTGTGCCATTCAAGTGTCCATGAAATAGGACAAATCCCAAAGGATCTTAAGAAGCTAGTTTTTGATCTCATTATGGAAGAAGATAGAGAACATGATAAGGAGATTATGATAAAAAGGGTATGCAAGAGGCTAGAATTATGGAAAGAAGTGGAGTCTAACACAATTGATATGATGATAGAAGAGGATTTCACTAGAGAGAATGAAAGGTGGAAGAAAAATATGATGGAGATAAGACATATGGCTAGTGAAATTGAGGTAGCTATTTTTAGCCTTTTGGTTGAAGAATTTTCAAAGGAACTTGTGTGTTAA 1488 0.3696 MMAQKYLHELLEEDQEPFILHKYISDRRSKIKTQIYPRKTHKPLHQNSNFPTNLCKNVCLFSFPETTTQELRKSPLFDFQSPKAKSKSPIKFQIPSRTANLLLEAALKIQKHSSSKTKSSGFSLFGSLFKRLTQRSHKRKEIEGSDLNLCVKDILKWESRKLSNGCMKEQEKLDFCNGRSSSAVWSESNEDKSLDMETWSSSSSRHCDDDCEIKEIEFVTNHHHKDNSECACCHDINGFCDSPFCFVLQKSPSFDRYTSELPSSTPSPNHHNTQDKESNGGEEEKEDKEHCSPVCVLDPPFKDDEESHGNDEEDSSNLRCSYAIIERAKQQLLYKLSRFEKLAELDPLELEKRMLEDEDENDYETLMENDDSEVEGSETSCKENEFMQLVFEAVCHSSVHEIGQIPKDLKKLVFDLIMEEDREHDKEIMIKRVCKRLELWKEVESNTIDMMIEEDFTRENERWKKNMMEIRHMASEIEVAIFSLLVEEFSKELVC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0381 495 MobiDBLite consensus disorder prediction 257 315 - -
Lan9g0381 495 PANTHER OS04G0572500 PROTEIN 1 495 - -
Lan9g0381 495 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 495 - -
Lan9g0381 495 MobiDBLite consensus disorder prediction 275 306 - -
Lan9g0381 495 MobiDBLite consensus disorder prediction 257 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0381 Lan-Chr9 5656370 5661416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0381 1 302 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 36.522 2.19e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0381 - - gmx:100814311 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0381 9 5656370 5661416 Lan19g0399 19 5113004 5117181 LSH
Lan9g0381 9 5656370 5661416 Lan20g1146 20 15494223 15497438 PCT
Lan20g1146 20 15494223 15497438 Lan9g0381 9 5656370 5661416 PCT