Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0349 ATGGAGAATGCGAATTCATCTGGAATAGCAAGAACTAAATCGGATCAACTAGTGGATTTGGTGGTATCAGCTCTTAAGTCACAATCATCGGGTGATTCGATAGGAGTGGCGGATGGTGATGGTGGTGGTGGAAGTAGCTTGACAAGGAAGTCAAGTTGGAGGATGATGGGAGCGTCCCCGAGTCGCGGTGGTGGTGGTGGTGGTGGTAGTAGAAAGACACACATAAGAAAGACTAGTAGTGGTGTTGCTCTTAGTAGAGCTTCGAGCAGCATGGATTTCTCATTCTCTTTTACCGGCTTCACTCTTCCTCCTGATGAGATCTCTGACTCTAGGCCCTTCAGTGATGATGATATTCCTGAAGATATTGAAGCTGGAATTCATAAACCAAAGTTTCAAGGAGAACCAACTCTACCAATATATCTAAAGTTCAGTGATGTGGCCTACAAGGTAGTGATTAAGGGCATGACCAAAACTGAAGAGAAAGATATCTTGAAGGGAATCAGTGGTGCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAAACATCACTTTTGAATCTAATTGGAGGAAGACTAAGTCATCCAACAAGTTGTGGCACTATCAGTTACAATGAACAACCATACTCTAAGTGTTTAAAGAGCAGGATTGGATTTGTGACACAAGATGATGTTCTGTCTCCTCATCTAACTGTGAAAGAGACTCTGACATACGCAGCGCGCCTTAAATTGCCGAAAACATTAACTAGAGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCTATGAACTTGGCTTAGAGAGGTGCCAAGATACTATGATAGGAGGTTCCTTTATTAGAGGAGTATCGGGTGGAGAAAGGAAGAGAGTTTGTGTTGGCAATGAGATCATAATAAACCCTTCTCTATTGTTCCTTGATGAACCAACTTCTGGTTTGGATTCTACAACTGCATTGAAGATAGTTCAGATGCTACATGACATAGCTGAGGCTGGAAAAACTGTTGTGACAACAATTCATCAACCATCAAGTAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTTGGAAAAGGGAACTTACTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCCAACTCATAGGGTGTTCACCTCTTATTGCAATGAATCCAGCAGAGTTTTTACTAGACCTTGCAAATGGAAACTTAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAACTTCTGATAGGAAATGCAGAACCTGAAACAAGGAATGGAAAACCATCACCTGCAGTTGTACAAGAGTATCTGGTGGAGTCATATGAGACTAGAGTTGCAGAAATAGAGAAGAAAAGGCTAATGATTCCTACCCCTCTTGATGAAGAAATTAAGGCTAAGGTTACTTGTCCGAAAAGGGAATGGGGTGCAAGTTGGTGTGAACAATATTCGATATTATTTTGGAGAGGAATCAAGGAAAGGAAGCATGACTATTTTAGCTGGTTGAGAATCACACAAGTTCTATCTACTGCAATCATCTTAGGATTACTTTGGTGGCAATCACATGCTAACAACCTTAAAGGCCTGCAAGACCAGGCAGGACTTCTTTTCTTTATAGCAGTATTTTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGTTGACTAAGGAAAGAGCAACAGATATGTACAGATTAAGTGCATACTTTGTGGCTAGAATTACAAGTGACCTTCCATTAGACTTAGTACTACCAGTACTTTTCCTCCTTGTGGTTTACTTCATGGCCGGTTTGAGATTGAGTACAGGACCCTTTTTCCTTACCATTCTTACAGTTTTTCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGTGCCACACTAATGGACTTGAAAAGGGCAACAACTTTGGCTTCAGTAACTGTAATGACTTTCATGCTGGCTGGAGGCTTTTTTGTGAAGAGAGTCCCTATATTTATATCTTGGATTAGATACCTATCATTCAACTATCACACTTACAAGCTCTTGCTCAAGGTACAATATGATCACATTACACCTAGCATAAATGGAATCAGAATAGACAGTGGTTTAACAGAAGTAGTTGCTCTAGTAGCCATGGTTTTCGGTTACCGTCTATTGGCATATCTTTCTTTGCGGCGGATGAAACTTCAAGCATGA 2208 0.4076 MENANSSGIARTKSDQLVDLVVSALKSQSSGDSIGVADGDGGGGSSLTRKSSWRMMGASPSRGGGGGGGSRKTHIRKTSSGVALSRASSSMDFSFSFTGFTLPPDEISDSRPFSDDDIPEDIEAGIHKPKFQGEPTLPIYLKFSDVAYKVVIKGMTKTEEKDILKGISGAVNPGEVLALMGPSGSGKTSLLNLIGGRLSHPTSCGTISYNEQPYSKCLKSRIGFVTQDDVLSPHLTVKETLTYAARLKLPKTLTREQKEKRALDVIYELGLERCQDTMIGGSFIRGVSGGERKRVCVGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGNLLYFGKASEAMDYFQLIGCSPLIAMNPAEFLLDLANGNLNDVSVPSELEDKLLIGNAEPETRNGKPSPAVVQEYLVESYETRVAEIEKKRLMIPTPLDEEIKAKVTCPKREWGASWCEQYSILFWRGIKERKHDYFSWLRITQVLSTAIILGLLWWQSHANNLKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERATDMYRLSAYFVARITSDLPLDLVLPVLFLLVVYFMAGLRLSTGPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYLSFNYHTYKLLLKVQYDHITPSINGIRIDSGLTEVVALVAMVFGYRLLAYLSLRRMKLQA* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0349 735 Pfam ABC-2 type transporter 344 405 IPR043926 GO:0140359
Lan9g0349 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 380 IPR027417 -
Lan9g0349 735 Pfam ABC-2 type transporter 482 691 IPR013525 GO:0016020|GO:0140359
Lan9g0349 735 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 731 - -
Lan9g0349 735 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 15 731 - -
Lan9g0349 735 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 141 387 IPR003439 GO:0005524
Lan9g0349 735 Pfam ABC transporter 164 315 IPR003439 GO:0005524
Lan9g0349 735 MobiDBLite consensus disorder prediction 26 81 - -
Lan9g0349 735 Gene3D - 141 381 IPR027417 -
Lan9g0349 735 ProSitePatterns ABC transporters family signature. 287 301 IPR017871 GO:0005524
Lan9g0349 735 SMART AAA_5 173 364 IPR003593 -
Lan9g0349 735 CDD ABCG_EPDR 138 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0349 Lan-Chr9 5306513 5318065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0349 23 401 Calmodulin-binding Proteins AT2G36910 25.641 1.29e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0349 K05681 - gmx:100798801 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0349 9 5306513 5318065 Lan9g0349 9 5306513 5318065 PCT