Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0344 ATGTCGATATTATCAAGCATGGATCCGCCCACAATTGACGTGGACCTCGGCGGGCCCGAGAAGATTGAAGAGGTGAAAGAGGGAGGTCAATTGTTCCATTGTGATCTTTGTGATACAGAAGTGATTCACAAGTTGGCTCAGATGTTCCTTCCCGGACTTGCTTCGGCTTGTGTTGACAACACATCAGGTGATCTCTTCAGGACGCCTGGTTCAGTGGTCGATGAATTGAGGAAGGAAATGATAGATTATGTTACCCAGAGAAGTGAATCGTTTGTTGCCGAGTCTGTTATATTGGAAGGCGATCTGGATGGTGAAGTATCAGATCATCCTTTCGATATCATTTCTAATATGGTTGATGACTTTGTGAGTTTAAAGAGGAATTTCTTTACCCGTGTTTCGGGATGGCTGTTAAGTGAAAAGAGGGAAGACAATATAGAGGATTTCGTTCAAGAGATGGAAATTAATGGTTTTTGGACTCTAGATAGAAGAGAAACAATTGCAGAAACTTTCCTTAAGAATGTTGACTTTGAGAACAAATATCACTGTGGCATGAAGTTTAATTCTCCCGAAGAGCTTTCCAATCATGTTGACAGCTGCAACTTTAGATCCATATTTTGCGAAAACGAGGGATGCAATGCCAGATTTTGTGCAGGTCATTTGAAGGAGCATGATTCAACTTGTCCTTTCAAGATAATTCTGTGCGAACAGAGGTGTCCAGATAGCATTATGAGACGTGACATGGACAGGCATTGTATAACTGTTTGTCCCATGAAGCTCATAAACTGTCCTTTTTTCGCAGTCGGTTGTCGTTCTGCTATTGTGCAATGTATGATCGGTAAACATTGTTCAGATGATGTTCATTCTCACTTGTTTCACTTGCTTAAAGGCACGCACAAGCAAGCAAATGGGGAAGATCTTCAACGACGAGTGGAGGAAATTCTACAGGCTGAATCAAGCGGCCGGTTAGCTCAGGCACGGGATGTGAGATCTTTAAGCATCATTGTCAAGGGTATTGAAGCTAAGTTAGGGCCTATTAAGGTGAGGGCTGTGGAAAAAAATAGCTCAGAGACTATTACCAAGAATGCTAATGTGGAAGTTGCTGACACCGATACGAAGGGCAGTGAGCAGAACACACAGGCTTCGGATATGGTAAGTTCACCAGATAAAGCTGACAAGGGTGACAGTGTGAATATAAGTAGTGCAGAGAATGCTGCCAAGACCGAGGATAGCGAACATAGTCACATTGAAAACAATGGCAGTGAAGAGAGGAGACGAACTATGGTAAATTTATCCGATAAAGATGAGGATACCGCCAAGAGTGATGATAGTGACCACAGTCACCTTGAGAACAAGAACAGTGAAGAGAGGACACAGACTTCAAATACGATTACTTTATCTGATAAAGCTGAAATTAGTGTTGCAATCGATGATGGCACACAGATTCACAAGGAGAACCAAGACGCCACGGGTAGTGAATTACTTAAGGGCAACAATGAGAGCAACCAGATAAATTTGGAAAAAGTAGCAGATAAAGGAGAAATCAGTGCCACAAATGCGGGCAATGCAGAGAATAGCACTGAAAATATCAACTTTGATGATAAGGAAAACGACATTCAGAATTCGGAAGTGGATACTAAGGGCACGGTCAAGAGTAATGTTAAGAACAAAGATATTGAAGATGATAACTTAAAAGAGAGCATACAAACTTCGAAAGTGAAAAATGTATCGGATTTAGCTGCATGA 1743 0.4171 MSILSSMDPPTIDVDLGGPEKIEEVKEGGQLFHCDLCDTEVIHKLAQMFLPGLASACVDNTSGDLFRTPGSVVDELRKEMIDYVTQRSESFVAESVILEGDLDGEVSDHPFDIISNMVDDFVSLKRNFFTRVSGWLLSEKREDNIEDFVQEMEINGFWTLDRRETIAETFLKNVDFENKYHCGMKFNSPEELSNHVDSCNFRSIFCENEGCNARFCAGHLKEHDSTCPFKIILCEQRCPDSIMRRDMDRHCITVCPMKLINCPFFAVGCRSAIVQCMIGKHCSDDVHSHLFHLLKGTHKQANGEDLQRRVEEILQAESSGRLAQARDVRSLSIIVKGIEAKLGPIKVRAVEKNSSETITKNANVEVADTDTKGSEQNTQASDMVSSPDKADKGDSVNISSAENAAKTEDSEHSHIENNGSEERRRTMVNLSDKDEDTAKSDDSDHSHLENKNSEERTQTSNTITLSDKAEISVAIDDGTQIHKENQDATGSELLKGNNESNQINLEKVADKGEISATNAGNAENSTENINFDDKENDIQNSEVDTKGTVKSNVKNKDIEDDNLKESIQTSKVKNVSDLAA* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0344 580 MobiDBLite consensus disorder prediction 549 564 - -
Lan9g0344 580 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 4 534 IPR043211 -
Lan9g0344 580 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 4 534 - -
Lan9g0344 580 Pfam TRAF-type zinc finger 223 281 IPR001293 GO:0008270
Lan9g0344 580 MobiDBLite consensus disorder prediction 361 385 - -
Lan9g0344 580 MobiDBLite consensus disorder prediction 361 465 - -
Lan9g0344 580 ProSiteProfiles Zinc finger TRAF-type profile. 223 270 IPR001293 GO:0008270
Lan9g0344 580 SUPERFAMILY TRAF domain-like 205 292 - -
Lan9g0344 580 MobiDBLite consensus disorder prediction 514 564 - -
Lan9g0344 580 MobiDBLite consensus disorder prediction 405 454 - -
Lan9g0344 580 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 260 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0344 Lan-Chr9 5252579 5256861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0344 - - lang:109356552 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0344 9 5252579 5256861 Lan5g1042 5 23701195 23724291 LSH
Lan9g0344 9 5252579 5256861 Lan9g0344 9 5252579 5256861 PCT
Lan5g1042 5 23701195 23724291 Lan9g0344 9 5252579 5256861 PCT
Lan9g0344 9 5252579 5256861 Lan5g1042 5 23701195 23724291 PCT