Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0336 ATGGCTACTACATTATGCACATACCTCATTTTTCTTCTCTCCTTCACATTCTTCAATCTCAGTTCATATTCTTCACCATCAGAAACTGATATTCTTCTCTCATTCAAAGCCTCAATCCAAGACTCTAACAATGCATTATCAACATGGTCCAATACTTCATCAAACCATTATTGTAACTGGACTAGAATCTCATGCTCAAATACAAAACCATTCTCAGTAACTTCTATTAACCTTCAAAGCTTAAATCTTTCTGGTGATATCTCTTCTTCTTTATGTGATTTACCAAAACTCTCTTACCTCAACCTTGCTGATAATAGTTTCAATGAACCTATTCCACTTCACTTTTCACAGTGTAGTTTCTTGGAAACTTTGAACCTTAGTAACAATCTTATATGGGGTACTATCCCTTCTCAGATTTCTCAACTTGGGTCATTGAAAGTACTTGACTTAAGTAGAAACCATATAGAAGGAAATATCCCTGAAAGTTTAGGTGCATTGAAGAATCTTCAAGTACTTAACATGGGTAGTAACTTGTTATCAAGTAATGTACCTGCAATTTTTGGAAACTTAACTAAGCTTGAAGTGCTTGATTTGTCTCAAAATCCTTACTTGGTGAGTGAGATTCCTAAGGATATTGGTGAACTTGGAAGCTTAAAGAAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAGGTTCTTTGTTGGGTTTGCATAGTTTAACTGATTTGGATCTTTCTGATAATAATCTAACAGGTTTGGTTCCAAAGTTTCTAGCTTCTTCTCTTGAGAATCTAGTTTTCTTTGATGTTTCACAGAACAAGCTTTCAGGGCCATTTCCAAATGGAATTTGTAAAGGCCTTGTTATAAATCTCAGCCTCCACACAAATATTTTCACAGGTTCTTTACCAAACAATTCTATTAGTGAATGTACGAGTCTAGAGAGATTCCAAGTTCAGAACAATGGTTTCTATGGTAATTTCCCTAATGAGCTTTTTTCATTACCTAAAATCAAGCTCATAAGAGCTGAAAACAATAGATTTTCTGGTCAAATACCTGAGTCAATATCAAAAGCTGTTTTTTTGGAACAAGTTCAGCTTGACAATAACAGCTTTTCAGGTCAAATCCCTTCAGGCCTTGGCTTTGTCAAGACCTTATACAAATTCTCAGCTTCTCTCAATCATTTCTATGGTGAAATTCCTCCAAATTTCTGTGACTCACCAGTTATGAGCATAGTAAACCTCTCTCACAATTCACTTTCTGGTAAAATTCCTCAGCTGAAAAAATGCAGAAAACTAGTATCATTGTCTTTATCTGATAACACTTTAACTGGAGAAATACCAACTTCACTTGCTGAGTTACCAGTGTTAACTTACCTTGATCTTTCACATAACAACCTCACTGGTTCAATTCCACAAGGGCTGCAAAACTTGAAACTTGCACTTTTCAATGTTTCCTTCAATCATCTTTCTGGTGAAGTACCATACTCTTTGATTTCAGGTCTACCTGCCTCATATTTGGAGGGTAACCCTGCACTTTGTGGTCCTGGTTTACCAAACTCATGTTCTAATGATTATATGCCAAGACATCATAGTATTGGTGTTACAACATTAACATGTGCATTGATTGTTCTAGCATTTGTTGTTGGAATTGCCTTTGTTGTTGGTGGATTTATGTTGTATAAGAGATCCTGCAAGGGGAATGATAATGAAGTAGGTGTTTTTCGGTCGGTGTTCTTTTATCCTCTAAGAATCACTGAGAATGATTTGCTTATAGGGATGAATGAGAAAAGCTCATTAGGGAAAGGTGGAGTTTTTGGTGAAGTTTATGCTGTTAGTTTGCCTAGTGGTGAACTTATAGCTGTGAAGAAATTAGTTAATTTCGGAAACCGATCTTCGAAGAGTTTGAAAGCCGAGATGAAGACTATGGCAAGGATTAGGCATAGAAACATTGTTAAAATTCTGGGGTTCTGCCACTCAGATGAGTCAGTTTTGATCATTTATGAGTATTTGAATGAAAAAAGCTTAGGTGATTTGATTTCAAGTCAGAATTTTGAGTTACAATGGGGATTTAGATTGAGAATTGCTATTGGAGTTGCTCAAGGACTTGCTTATATTCACAAAGATTATGTTCCACACTTGCTTCATAGAAATGTTAAGTCAAATAATATTCTATTGGATGCAAATTTTGAGCCAAAAATCACTGATTTTGCTCTTGATAGAGTTTTGGGAGAATCTGCTTTTAAGTCAACTTTGGATTCTGAAGGTGGATCTTCATGTTATAATGCACCAGGTATGAGAAGTTATGTGAATAACATAAAGTACTTATGA 2334 0.3548 MATTLCTYLIFLLSFTFFNLSSYSSPSETDILLSFKASIQDSNNALSTWSNTSSNHYCNWTRISCSNTKPFSVTSINLQSLNLSGDISSSLCDLPKLSYLNLADNSFNEPIPLHFSQCSFLETLNLSNNLIWGTIPSQISQLGSLKVLDLSRNHIEGNIPESLGALKNLQVLNMGSNLLSSNVPAIFGNLTKLEVLDLSQNPYLVSEIPKDIGELGSLKKLLLQSSSFQGEIPGSLLGLHSLTDLDLSDNNLTGLVPKFLASSLENLVFFDVSQNKLSGPFPNGICKGLVINLSLHTNIFTGSLPNNSISECTSLERFQVQNNGFYGNFPNELFSLPKIKLIRAENNRFSGQIPESISKAVFLEQVQLDNNSFSGQIPSGLGFVKTLYKFSASLNHFYGEIPPNFCDSPVMSIVNLSHNSLSGKIPQLKKCRKLVSLSLSDNTLTGEIPTSLAELPVLTYLDLSHNNLTGSIPQGLQNLKLALFNVSFNHLSGEVPYSLISGLPASYLEGNPALCGPGLPNSCSNDYMPRHHSIGVTTLTCALIVLAFVVGIAFVVGGFMLYKRSCKGNDNEVGVFRSVFFYPLRITENDLLIGMNEKSSLGKGGVFGEVYAVSLPSGELIAVKKLVNFGNRSSKSLKAEMKTMARIRHRNIVKILGFCHSDESVLIIYEYLNEKSLGDLISSQNFELQWGFRLRIAIGVAQGLAYIHKDYVPHLLHRNVKSNNILLDANFEPKITDFALDRVLGESAFKSTLDSEGGSSCYNAPGMRSYVNNIKYL* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0336 777 PRINTS Leucine-rich repeat signature 242 255 - -
Lan9g0336 777 PRINTS Leucine-rich repeat signature 455 468 - -
Lan9g0336 777 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Lan9g0336 777 Gene3D Transferase(Phosphotransferase) domain 1 589 775 - -
Lan9g0336 777 SUPERFAMILY Protein kinase-like (PK-like) 600 769 IPR011009 -
Lan9g0336 777 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Lan9g0336 777 SMART LRR_sd22_2 239 269 - -
Lan9g0336 777 SMART LRR_sd22_2 166 185 - -
Lan9g0336 777 SMART LRR_sd22_2 190 210 - -
Lan9g0336 777 SMART LRR_sd22_2 455 478 - -
Lan9g0336 777 ProSiteProfiles Leucine-rich repeat profile. 144 166 IPR001611 GO:0005515
Lan9g0336 777 Pfam Protein kinase domain 597 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0336 777 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Lan9g0336 777 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Lan9g0336 777 ProSiteProfiles Protein kinase domain profile. 596 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0336 777 Gene3D Ribonuclease Inhibitor 184 289 IPR032675 -
Lan9g0336 777 Pfam Leucine Rich repeat 240 254 IPR001611 GO:0005515
Lan9g0336 777 Gene3D Ribonuclease Inhibitor 290 531 IPR032675 -
Lan9g0336 777 SMART LRR_typ_2 94 118 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 455 478 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 142 165 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 264 288 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 239 262 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 190 215 IPR003591 -
Lan9g0336 777 SMART LRR_typ_2 166 189 IPR003591 -
Lan9g0336 777 SUPERFAMILY L domain-like 290 519 - -
Lan9g0336 777 PANTHER OSJNBB0022F23.6 PROTEIN 8 767 - -
Lan9g0336 777 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 767 - -
Lan9g0336 777 SUPERFAMILY L domain-like 24 287 - -
Lan9g0336 777 ProSiteProfiles Leucine-rich repeat profile. 457 480 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0336 Lan-Chr9 5188277 5190882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0336 32 765 Receptor kinase-like Gene Family AT5G06940 62.449 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan9g0336 Pkinase 2.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0336 - - lang:109355886 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0336 9 5188277 5190882 Lan5g1027 5 23553256 23556357 LSH
Lan9g0336 9 5188277 5190882 Lan19g0301 19 3308461 3312261 LSH