Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan9g0336 | ATGGCTACTACATTATGCACATACCTCATTTTTCTTCTCTCCTTCACATTCTTCAATCTCAGTTCATATTCTTCACCATCAGAAACTGATATTCTTCTCTCATTCAAAGCCTCAATCCAAGACTCTAACAATGCATTATCAACATGGTCCAATACTTCATCAAACCATTATTGTAACTGGACTAGAATCTCATGCTCAAATACAAAACCATTCTCAGTAACTTCTATTAACCTTCAAAGCTTAAATCTTTCTGGTGATATCTCTTCTTCTTTATGTGATTTACCAAAACTCTCTTACCTCAACCTTGCTGATAATAGTTTCAATGAACCTATTCCACTTCACTTTTCACAGTGTAGTTTCTTGGAAACTTTGAACCTTAGTAACAATCTTATATGGGGTACTATCCCTTCTCAGATTTCTCAACTTGGGTCATTGAAAGTACTTGACTTAAGTAGAAACCATATAGAAGGAAATATCCCTGAAAGTTTAGGTGCATTGAAGAATCTTCAAGTACTTAACATGGGTAGTAACTTGTTATCAAGTAATGTACCTGCAATTTTTGGAAACTTAACTAAGCTTGAAGTGCTTGATTTGTCTCAAAATCCTTACTTGGTGAGTGAGATTCCTAAGGATATTGGTGAACTTGGAAGCTTAAAGAAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAGGTTCTTTGTTGGGTTTGCATAGTTTAACTGATTTGGATCTTTCTGATAATAATCTAACAGGTTTGGTTCCAAAGTTTCTAGCTTCTTCTCTTGAGAATCTAGTTTTCTTTGATGTTTCACAGAACAAGCTTTCAGGGCCATTTCCAAATGGAATTTGTAAAGGCCTTGTTATAAATCTCAGCCTCCACACAAATATTTTCACAGGTTCTTTACCAAACAATTCTATTAGTGAATGTACGAGTCTAGAGAGATTCCAAGTTCAGAACAATGGTTTCTATGGTAATTTCCCTAATGAGCTTTTTTCATTACCTAAAATCAAGCTCATAAGAGCTGAAAACAATAGATTTTCTGGTCAAATACCTGAGTCAATATCAAAAGCTGTTTTTTTGGAACAAGTTCAGCTTGACAATAACAGCTTTTCAGGTCAAATCCCTTCAGGCCTTGGCTTTGTCAAGACCTTATACAAATTCTCAGCTTCTCTCAATCATTTCTATGGTGAAATTCCTCCAAATTTCTGTGACTCACCAGTTATGAGCATAGTAAACCTCTCTCACAATTCACTTTCTGGTAAAATTCCTCAGCTGAAAAAATGCAGAAAACTAGTATCATTGTCTTTATCTGATAACACTTTAACTGGAGAAATACCAACTTCACTTGCTGAGTTACCAGTGTTAACTTACCTTGATCTTTCACATAACAACCTCACTGGTTCAATTCCACAAGGGCTGCAAAACTTGAAACTTGCACTTTTCAATGTTTCCTTCAATCATCTTTCTGGTGAAGTACCATACTCTTTGATTTCAGGTCTACCTGCCTCATATTTGGAGGGTAACCCTGCACTTTGTGGTCCTGGTTTACCAAACTCATGTTCTAATGATTATATGCCAAGACATCATAGTATTGGTGTTACAACATTAACATGTGCATTGATTGTTCTAGCATTTGTTGTTGGAATTGCCTTTGTTGTTGGTGGATTTATGTTGTATAAGAGATCCTGCAAGGGGAATGATAATGAAGTAGGTGTTTTTCGGTCGGTGTTCTTTTATCCTCTAAGAATCACTGAGAATGATTTGCTTATAGGGATGAATGAGAAAAGCTCATTAGGGAAAGGTGGAGTTTTTGGTGAAGTTTATGCTGTTAGTTTGCCTAGTGGTGAACTTATAGCTGTGAAGAAATTAGTTAATTTCGGAAACCGATCTTCGAAGAGTTTGAAAGCCGAGATGAAGACTATGGCAAGGATTAGGCATAGAAACATTGTTAAAATTCTGGGGTTCTGCCACTCAGATGAGTCAGTTTTGATCATTTATGAGTATTTGAATGAAAAAAGCTTAGGTGATTTGATTTCAAGTCAGAATTTTGAGTTACAATGGGGATTTAGATTGAGAATTGCTATTGGAGTTGCTCAAGGACTTGCTTATATTCACAAAGATTATGTTCCACACTTGCTTCATAGAAATGTTAAGTCAAATAATATTCTATTGGATGCAAATTTTGAGCCAAAAATCACTGATTTTGCTCTTGATAGAGTTTTGGGAGAATCTGCTTTTAAGTCAACTTTGGATTCTGAAGGTGGATCTTCATGTTATAATGCACCAGGTATGAGAAGTTATGTGAATAACATAAAGTACTTATGA | 2334 | 0.3548 | MATTLCTYLIFLLSFTFFNLSSYSSPSETDILLSFKASIQDSNNALSTWSNTSSNHYCNWTRISCSNTKPFSVTSINLQSLNLSGDISSSLCDLPKLSYLNLADNSFNEPIPLHFSQCSFLETLNLSNNLIWGTIPSQISQLGSLKVLDLSRNHIEGNIPESLGALKNLQVLNMGSNLLSSNVPAIFGNLTKLEVLDLSQNPYLVSEIPKDIGELGSLKKLLLQSSSFQGEIPGSLLGLHSLTDLDLSDNNLTGLVPKFLASSLENLVFFDVSQNKLSGPFPNGICKGLVINLSLHTNIFTGSLPNNSISECTSLERFQVQNNGFYGNFPNELFSLPKIKLIRAENNRFSGQIPESISKAVFLEQVQLDNNSFSGQIPSGLGFVKTLYKFSASLNHFYGEIPPNFCDSPVMSIVNLSHNSLSGKIPQLKKCRKLVSLSLSDNTLTGEIPTSLAELPVLTYLDLSHNNLTGSIPQGLQNLKLALFNVSFNHLSGEVPYSLISGLPASYLEGNPALCGPGLPNSCSNDYMPRHHSIGVTTLTCALIVLAFVVGIAFVVGGFMLYKRSCKGNDNEVGVFRSVFFYPLRITENDLLIGMNEKSSLGKGGVFGEVYAVSLPSGELIAVKKLVNFGNRSSKSLKAEMKTMARIRHRNIVKILGFCHSDESVLIIYEYLNEKSLGDLISSQNFELQWGFRLRIAIGVAQGLAYIHKDYVPHLLHRNVKSNNILLDANFEPKITDFALDRVLGESAFKSTLDSEGGSSCYNAPGMRSYVNNIKYL* | 778 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan9g0336 | 777 | PRINTS | Leucine-rich repeat signature | 242 | 255 | - | - | |
Lan9g0336 | 777 | PRINTS | Leucine-rich repeat signature | 455 | 468 | - | - | |
Lan9g0336 | 777 | Pfam | Leucine rich repeat N-terminal domain | 26 | 66 | IPR013210 | - | |
Lan9g0336 | 777 | Gene3D | Transferase(Phosphotransferase) domain 1 | 589 | 775 | - | - | |
Lan9g0336 | 777 | SUPERFAMILY | Protein kinase-like (PK-like) | 600 | 769 | IPR011009 | - | |
Lan9g0336 | 777 | Gene3D | Ribonuclease Inhibitor | 25 | 183 | IPR032675 | - | |
Lan9g0336 | 777 | SMART | LRR_sd22_2 | 239 | 269 | - | - | |
Lan9g0336 | 777 | SMART | LRR_sd22_2 | 166 | 185 | - | - | |
Lan9g0336 | 777 | SMART | LRR_sd22_2 | 190 | 210 | - | - | |
Lan9g0336 | 777 | SMART | LRR_sd22_2 | 455 | 478 | - | - | |
Lan9g0336 | 777 | ProSiteProfiles | Leucine-rich repeat profile. | 144 | 166 | IPR001611 | GO:0005515 | |
Lan9g0336 | 777 | Pfam | Protein kinase domain | 597 | 765 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan9g0336 | 777 | Pfam | Leucine rich repeat | 144 | 202 | IPR001611 | GO:0005515 | |
Lan9g0336 | 777 | Pfam | Leucine rich repeat | 432 | 491 | IPR001611 | GO:0005515 | |
Lan9g0336 | 777 | ProSiteProfiles | Protein kinase domain profile. | 596 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan9g0336 | 777 | Gene3D | Ribonuclease Inhibitor | 184 | 289 | IPR032675 | - | |
Lan9g0336 | 777 | Pfam | Leucine Rich repeat | 240 | 254 | IPR001611 | GO:0005515 | |
Lan9g0336 | 777 | Gene3D | Ribonuclease Inhibitor | 290 | 531 | IPR032675 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 455 | 478 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 142 | 165 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 264 | 288 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 239 | 262 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 190 | 215 | IPR003591 | - | |
Lan9g0336 | 777 | SMART | LRR_typ_2 | 166 | 189 | IPR003591 | - | |
Lan9g0336 | 777 | SUPERFAMILY | L domain-like | 290 | 519 | - | - | |
Lan9g0336 | 777 | PANTHER | OSJNBB0022F23.6 PROTEIN | 8 | 767 | - | - | |
Lan9g0336 | 777 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 8 | 767 | - | - | |
Lan9g0336 | 777 | SUPERFAMILY | L domain-like | 24 | 287 | - | - | |
Lan9g0336 | 777 | ProSiteProfiles | Leucine-rich repeat profile. | 457 | 480 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan9g0336 | Lan-Chr9 | 5188277 | 5190882 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan9g0336 | 32 | 765 | Receptor kinase-like Gene Family | AT5G06940 | 62.449 | 0.0 | 882 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Lan9g0336 | Pkinase | 2.5e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan9g0336 | - | - | lang:109355886 | 1488.78 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan9g0336 | 9 | 5188277 | 5190882 | Lan5g1027 | 5 | 23553256 | 23556357 | LSH | |
Lan9g0336 | 9 | 5188277 | 5190882 | Lan19g0301 | 19 | 3308461 | 3312261 | LSH |