Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0315 ATGGCTTTTTGGTTGTGTTTTGGAAATTCTGATCGCAAAAAACGAGGAAAAGCACAAGCTACATGGCGGGTGTTTTCTTTGAAGGAATTGCACTCTGCTACAAATAACTTCAACTACGATAACAAGCTTGGAGAAGGCGGTTTCGGCAGCGTGTACTGGGGCCAACTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGCTTGGAGTAACAAAGCAGATATGGAATTTGGCGTCGAAGTTGAAATATTGGCAAGAGTGCGACACAAAAATCTTTTAAGTCTACGTGGCTATTGTGCCGAAGGACAGGAACGACTAATTGTATATGACTATATGCCAAATTTGAGCCTGCAATCTCATCTTCATGGACAACACGCAGCAGAATGTCTTCTCGACTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTGTGTATCTTCATCACCAAACAACACCACATATCATCCACAGAGATATTAAAGGAAGCAATGTATTGCTGGATTCAGATTTCCAGGCCCATGTTGCTGATTTCGGTTTCGCCAAGCTAATCCCCGACGGGGCAACACATGTGACTACAAAAGTTAAGGGCACTCTTGGCTACCTTGCACCGGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTGTATAGTTTCGGCATTCTCCTTCTAGAACTTGCCTGTGGCCGAAAACCAATCGAAAAGGTTAGTTCCACGGTGAAGCGATCGATAGTTGATTGGGCACTGCCGCTGGTTTGCGAGAAGAAATTTAGCGAACTTGTTGATCCGAGACTAAATGGCGAATATGTGGAGGAAGAGCTTAAAAGAGTTATTTTTGTTGCAATGATATGTGCTCAAAATCAACCTGAGAAGAGACCTACCATGCTTGATGTTGTTGAGTTATTGAAGGGAGAATCTAAAGAGAAACTTTCTCAGATAGAGAATAGTGAAATGTTTAGAACCACTCCTGCTGCAGAATACAATGATGGTGGTTCATCAATGGCTGAAGATAGTTCAGATTTCATCTCAGCAGAAAAAGAGTACAAACATGAGTTGGAAGAGAATACTTGA 1089 0.4206 MAFWLCFGNSDRKKRGKAQATWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFGVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLQSHLHGQHAAECLLDWNRRMNIAIGSAEGIVYLHHQTTPHIIHRDIKGSNVLLDSDFQAHVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELACGRKPIEKVSSTVKRSIVDWALPLVCEKKFSELVDPRLNGEYVEEELKRVIFVAMICAQNQPEKRPTMLDVVELLKGESKEKLSQIENSEMFRTTPAAEYNDGGSSMAEDSSDFISAEKEYKHELEENT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0315 362 Gene3D Phosphorylase Kinase; domain 1 7 112 - -
Lan9g0315 362 PANTHER BNAA05G14800D PROTEIN 4 360 - -
Lan9g0315 362 Pfam Protein kinase domain 38 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0315 362 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Lan9g0315 362 MobiDBLite consensus disorder prediction 321 345 - -
Lan9g0315 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lan9g0315 362 PIRSF ILK 7 327 - -
Lan9g0315 362 ProSiteProfiles Protein kinase domain profile. 37 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0315 362 MobiDBLite consensus disorder prediction 318 345 - -
Lan9g0315 362 Gene3D Transferase(Phosphotransferase) domain 1 113 326 - -
Lan9g0315 362 SUPERFAMILY Protein kinase-like (PK-like) 20 308 IPR011009 -
Lan9g0315 362 SMART serkin_6 37 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0315 362 PANTHER OS01G0750732 PROTEIN 4 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0315 Lan-Chr9 4292121 4297621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0315 25 335 Trihelix Transcription Factor Family AT1G70460 48.428 4.11e-96 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan9g0315 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0315 - - gmx:100788153 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0315 9 4292121 4297621 Lan9g0315 9 4292121 4297621 ECH