Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0308 ATGGCACAAATTTTGCTTCATGGAAATCTCCATGCTACTATCTTTGAGGTGGATAGACTCAAGGAGGATGGTGGTGGTGGTGGTAATTTTTTTAGCAAGATCATTGAAAACATAGGGGACAAAGTTGGTATTGGAAAAGGAGATACTAAACTCTATGCAACTATTGATCTGGAGAAAGCAAGAGTTGGAAGAACTAGAATTATCGAAAATGAAGAAAATAATCCTAGATGGTATGAGTCTTTTCACATTTATTGTGGCCATTTGGCTTCAAACATTATATTCACTGTCAAAAATGGTAATCCTATTGGAGCGACATTAATTGGAAGAGGATATGTGCCTGTCGAGGATGTATTGGATGGCGAGGAAATAGATCGATGGGTCGAACTCTTGGACAAGGATAAAAATCCAATACACGAGGGTTCGAAGATCCATGTGAAGCTGCAATATTTCGATATCACGAAAGATCGCAGCTGGGCTCGAGGCATTAGAAGTGCTAAATTTCCTGGAGTTCCATATACTTTCTTCTCGCAAAGACAAGGATGCAAGGTTACTCTTTACCAAGATGCTCATGTGCCTGATAACTTTGTCCCGAAAATACCACTTTCTGGAGGCAAGACTTATGAGCCTCATCGGTGTTGGGAGGATATTTTTGATGCAATCACCAATGCAAAACACTTAATATACATTACTGGCTGGTCTGTGTATACTGAGATTTCGCTGATAAGGGATTCGAGGAGGCCGAAGCCAGGGGGAGACATAACACTTGGTGAGCTTCTTAAGAAAAAGGCTAGTGAAGGCGTCAGGGTTCTGATGCTTGTTTGGGATGATAGAACATCGGTTAGTTTGTTGAAAAAAGATGGACTAATGGCCACTCATGACGAAGAAACCGAGCAATTCTTCCACGACACTGATGTGCATTGTGTCTTATGCCCTCGCAATCCCGATGATGGCGGTAGCATTGTTCAGGATTTAGAAATATCTACCATGTTTACTCATCATCAGAAAATTGTGGTAGTGGATAGTGAGTTGCCTAATGGAGGGTCGGATAGGCGAAGAATTGTGAGTTTTGTTGGAGGTATTGACCTCTGTGATGGAAGATATGATACAGCTTTCCACTCGCTTTTCCGAACCCTCGACACAGCACATCATGATGATTTTCATCAACCTAACTTTCCTGGTGCAGATATAAAAAAAGGCGGTCCTAGGGAACCATGGCATGATATCCATTCTCGCCTTGAAGGACCGATAGCTTGGGATGTTTTGTTTAACTTCGAGCAGAGATGGAGGAAGCAAGGAGGGAAGGATATACTCGTTTCGCTTAGAGAGCTTGAAGATATCTTTATTCCCCCATCCCCTGTGACATTTCCTGAGGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATCGATGGAGGTGCTGCTTTCGGCTTTCCAGAGACCCCTGAAGATGCTGCAAGAGCTGGACTAGTTAGTGGGAAGGATAATATCATTGATCGAAGTATTCAAGATGGTTATATTAATGCTATTCGGCGCGCGAAGAACTTCATCTATATCGAAAATCAGTATTTCCTCGGAAGCTCCTTTGCCTGGGCTGCAGATGATATCAAGCCTGAAGACATTGGTGCTTTGCATCTAATCCCAAAGGAACTTTCACTTAAGATTGTTAGTAAGATCGAAGCCGGGGAAAGGTTCACTGTGTATGTTGTAGTCCCAATGTGGCCAGAGGGTGTCCCGGAAAGTGGATCAGTTCAGGCAATATTGGACTGGCAAAGGAGAACACTAGAGATGATGTACAAGGATGTTGTTCAAGCACTCAAGGCTAAGGGAAGTGATGAAGATCCTCGAAACTATTTGACATTCTTCTGCCTCGGAAATCGCGAAGTGAACAAACAGGGTGAGTATGAGCCTTCAGAGAAACCAGAAGAGGATTCAGATTATCATAGAGCACAGGAGGCGCGACGCTTCATGATTTATGTACATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTCGGGACTCTGAGATTGCGATGGGCGCATATCAGCCGTATCATTTGGCTGCTAGGCAGCCTGCACGCGGTCAAATCCACGGTTTCCGAATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGAGTCCTTCGACCGGCCCGAAAGTGAAGAATGTATTAGTAAGGTGAACCAGATTGCTGAAAAGTATTGGGATCTATACTCTAGTGAGTCACTTGAGCATGATCTTCCCGGCCACTTGCTCCGCTATCCTATCGCGGTTGCGAGTGAAGGAGATATCACAGAACTGCCAGGATTTGAGTTCTTTCCTGACACTAAGGCTCGCATTCTCGGAGGCAAAGTTGACTACCTGCCACCAATCCTTACCACTTAG 2433 0.4381 MAQILLHGNLHATIFEVDRLKEDGGGGGNFFSKIIENIGDKVGIGKGDTKLYATIDLEKARVGRTRIIENEENNPRWYESFHIYCGHLASNIIFTVKNGNPIGATLIGRGYVPVEDVLDGEEIDRWVELLDKDKNPIHEGSKIHVKLQYFDITKDRSWARGIRSAKFPGVPYTFFSQRQGCKVTLYQDAHVPDNFVPKIPLSGGKTYEPHRCWEDIFDAITNAKHLIYITGWSVYTEISLIRDSRRPKPGGDITLGELLKKKASEGVRVLMLVWDDRTSVSLLKKDGLMATHDEETEQFFHDTDVHCVLCPRNPDDGGSIVQDLEISTMFTHHQKIVVVDSELPNGGSDRRRIVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGADIKKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDILVSLRELEDIFIPPSPVTFPEDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSFAWAADDIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESGSVQAILDWQRRTLEMMYKDVVQALKAKGSDEDPRNYLTFFCLGNREVNKQGEYEPSEKPEEDSDYHRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLHESFDRPESEECISKVNQIAEKYWDLYSSESLEHDLPGHLLRYPIAVASEGDITELPGFEFFPDTKARILGGKVDYLPPILTT* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0308 810 SUPERFAMILY Phospholipase D/nuclease 153 438 - -
Lan9g0308 810 SUPERFAMILY Phospholipase D/nuclease 445 740 - -
Lan9g0308 810 PIRSF PLD_plant 1 810 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan9g0308 810 CDD PLDc_pPLDalpha_2 494 703 - -
Lan9g0308 810 SMART C2_3c 9 126 IPR000008 -
Lan9g0308 810 Pfam Phospholipase D C terminal 729 799 IPR024632 -
Lan9g0308 810 CDD PLDc_pPLDalpha_1 203 380 - -
Lan9g0308 810 Gene3D C2 domain 8 160 IPR035892 -
Lan9g0308 810 ProSiteProfiles C2 domain profile. 1 127 IPR000008 -
Lan9g0308 810 Gene3D Endonuclease Chain A 202 444 - -
Lan9g0308 810 CDD C2_plant_PLD 2 150 - -
Lan9g0308 810 PANTHER PHOSPHOLIPASE D 2 810 IPR015679 -
Lan9g0308 810 PANTHER PHOSPHOLIPASE D 2 810 - -
Lan9g0308 810 SMART pld_4 328 366 IPR001736 GO:0003824
Lan9g0308 810 SMART pld_4 656 683 IPR001736 GO:0003824
Lan9g0308 810 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 328 366 IPR001736 GO:0003824
Lan9g0308 810 Pfam C2 domain 41 129 IPR000008 -
Lan9g0308 810 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 42 151 IPR035892 -
Lan9g0308 810 Gene3D Endonuclease Chain A 479 702 - -
Lan9g0308 810 Pfam Phospholipase D Active site motif 328 366 IPR001736 GO:0003824
Lan9g0308 810 Pfam Phospholipase D Active site motif 657 683 IPR001736 GO:0003824
Lan9g0308 810 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 656 683 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0308 Lan-Chr9 4197048 4201035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0308 1 810 Phospholipase D Gene Family (Wang group) AT3G15730 82.121 0.0 1408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0308 K01115 - gmx:100786410 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0308 9 4197048 4201035 Lan9g0308 9 4197048 4201035 ECH