Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0296 ATGGGTATGGCTGCAGCAGAGTCACAACAGTATCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTTATTGAGAGGCTTCTGAAAACCTCTTCTTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTTGGCTTACATGAGAATGATGAGAGCAATCCAAATACACCATGTGTTTCTCCAAAAATCAATCATGAAGTGGAAGTGAATCTAGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTAAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTACCAGATGTTTGGAGGAAGGAGCTGAGGAATTTTTCTTGAAGCCTGTAAGGAAATCAGATTTGAATAGGCTGGAACCCCATATTAAGAGAACCAAACTGAAAGATCAAAAGCTTAAAACAAAAGAAAAGGTTGAAAATTCAGAAGTTGTTCAACATCAACCACAACAACAACAAATCATAAATGATCAACCACAACAACAAATTCAACAACCTCAATCCGAGACCAATGTCGAACAACAACAACAAATTCAACAACCTCAATCCGAGACGAATGTCGAACATCAACAACAACAATCACTACAACAAGGTAACAATAACAAGAGGAAGAGTGTGGAACAAGGGCTCTCACCTGAATCTGATAGAACAAGACCAAGATACAACAATGGCATAGCCACTTTGGTATGA 762 0.3819 MGMAAAESQQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENDESNPNTPCVSPKINHEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRKSDLNRLEPHIKRTKLKDQKLKTKEKVENSEVVQHQPQQQQIINDQPQQQIQQPQSETNVEQQQQIQQPQSETNVEHQQQQSLQQGNNNKRKSVEQGLSPESDRTRPRYNNGIATLV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0296 253 ProSiteProfiles Response regulatory domain profile. 12 148 IPR001789 GO:0000160
Lan9g0296 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 246 IPR045279 GO:0009736
Lan9g0296 253 MobiDBLite consensus disorder prediction 168 231 - -
Lan9g0296 253 SUPERFAMILY CheY-like 10 155 IPR011006 -
Lan9g0296 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 246 - -
Lan9g0296 253 MobiDBLite consensus disorder prediction 151 253 - -
Lan9g0296 253 MobiDBLite consensus disorder prediction 151 167 - -
Lan9g0296 253 SMART REC_2 11 144 IPR001789 GO:0000160
Lan9g0296 253 Gene3D - 10 239 - -
Lan9g0296 253 CDD REC_typeA_ARR 13 143 - -
Lan9g0296 253 Pfam Response regulator receiver domain 13 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0296 Lan-Chr9 3986895 3989622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0296 1 253 Response Regulator Gene Family AT3G57040 58.824 3.15e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g0296 Response_reg 6.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0296 K14492 - gmx:100788079 307.375