Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0292 ATGGAAGAAACGTGGTTATGTTCATTGTGTGGGAAAAGAGCTAGGATTGTGTGTGAGTCAGACCAGGCTAAGCTATGCTGGGAATGTGACCACAAAGTACACAGTGCTAACTTCCTTGTAGCTAAGCACTTAAGGATCCTTCTTTGCCGTTTATGTCAATCTCCTACTCCATGGAAGGCTTGTGGGCCCTCCTTAACTCCAAACTCGTCTATTTGTCACTCCTGCTCCCTTTTTCGGGATAATATTCGCAGCGACGACGATGAGGATGATGACGATGATGATAATGATATCGAGTCTGAAGACGACGAGAGTTATGATGATGTAGAAGAGGAAAAGGAGGGAGAGAACCAAGTAGTGCCATTGTCTTCTCCTTCTCCTAGTAGTGATGCTGACACGGATATATCTAGCGCCGCCACGGCTTCTGCAGGTGCTACTTCTGGTTTACCGTTGAAGCGTTTTCCTCATAACTTCTCTGTTCATGATTCTGATGATGAGATAGGGTGTTCCTCATCAGAAACTTTGTTTAGGCCATTGAAGCAGCTTAGAACTGGAATAAACCACAGGGAGACTGAACATGAGCAATGGTACAATCATAGATGA 600 0.4483 MEETWLCSLCGKRARIVCESDQAKLCWECDHKVHSANFLVAKHLRILLCRLCQSPTPWKACGPSLTPNSSICHSCSLFRDNIRSDDDEDDDDDDNDIESEDDESYDDVEEEKEGENQVVPLSSPSPSSDADTDISSAATASAGATSGLPLKRFPHNFSVHDSDDEIGCSSSETLFRPLKQLRTGINHRETEHEQWYNHR* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0292 199 SMART bboxneu5 2 48 IPR000315 GO:0008270
Lan9g0292 199 MobiDBLite consensus disorder prediction 83 149 - -
Lan9g0292 199 CDD Bbox1_BBX-like 6 48 - -
Lan9g0292 199 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 175 - -
Lan9g0292 199 MobiDBLite consensus disorder prediction 84 113 - -
Lan9g0292 199 PANTHER OS08G0178800 PROTEIN 7 175 - -
Lan9g0292 199 MobiDBLite consensus disorder prediction 118 143 - -
Lan9g0292 199 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0292 Lan-Chr9 3871595 3873198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0292 7 107 C2C2-CO-like Transcription Factor Family AT4G27310 50.000 1.41e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g0292 zf-B_box 4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0292 - - lang:109357038 313.153