Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0290 ATGATGACTAAGTCTAATTCTTCTAGTGAAAATAATGGGTTGAAGAAAGGTCCTTGGACTCCAGAGGAAGATCAGAAACTCATTGATTATATTCAGCAACATGGGCATGGGAAATGGCGTATCCTTCCCAAGAATGCAGGATTAAAGAGATGTGGAAAGAGTTGCAGGCTTCGTTGGGCAAATTATTTGAGGCCTGATATAAAGAGGGGAAAATTCTCATTGGAAGAAGAAGAAACCATCATACAATTACATAGTGTGATGGGAAACAAGTGGTCTACAATTGCTACAAACTTACCAGGAAGAACAGATAATGAGATAAAAAATTATTGGAATACTCATATAAAAAAAAAGTTATTAAATTTGGGAATAGATCCAATTACTCATACACCACACTATGAGGTTCTACAACACTCCTCTATTCTAAACTCTTTATATTCACCCCAATTGAATTATTCTTCTAGTCCTTTTCGAATTGATTGTAGTAGTAGTGTGGTAAATAATCAAAGCCAATTGCTAAGTTTACTCACAACTTTCTTATCATATCAAAATAGAAACCAAGATATTATGAATCATAATTTCCACCAAAACCAAATTGGTATAAGTACTAGTAGCCCTCTATTGCAAAACCAATCCCAATGCTCCCATCCAATGCAACTTAACTCTATCCAAAACTTCCGATCAAACCAAGTTCAAGTTCAAGAAAATCACCAACCTTGTGCTACATCAAATGATCCATTGCATGTGGAATCCCAACTCATGAAAATAAAATTAGAGAACCAAATATCTTCAATTGTTGCTACTCCTTTTAGCCACCAAGATAATACAAGTATACCAAATTTGTGGCAATATGAAGGAGGTTACATTCCAGATCAACAACAACAACCACAATCAATATCAACTATGCAAAGTTTGTCTTTGCCCAAGTTCAACTCCATTGTCAACAATCTCTTGGAAAATCAGATTTCATCAAATAACAACGAGGGAATGCCAAATTTCAACTTAAGCTCATTGTTATCATCCACAATTTCTTCTTCTACTTTGACTACTTCGAATTCATTATCTTCCACATCATTTGTCAATGGGAACACTGAAGATGAAAGGGACACTTACAACAGCAACATGTTGAATGACTCTGGACTTTTGTGA 1146 0.3508 MMTKSNSSSENNGLKKGPWTPEEDQKLIDYIQQHGHGKWRILPKNAGLKRCGKSCRLRWANYLRPDIKRGKFSLEEEETIIQLHSVMGNKWSTIATNLPGRTDNEIKNYWNTHIKKKLLNLGIDPITHTPHYEVLQHSSILNSLYSPQLNYSSSPFRIDCSSSVVNNQSQLLSLLTTFLSYQNRNQDIMNHNFHQNQIGISTSSPLLQNQSQCSHPMQLNSIQNFRSNQVQVQENHQPCATSNDPLHVESQLMKIKLENQISSIVATPFSHQDNTSIPNLWQYEGGYIPDQQQQPQSISTMQSLSLPKFNSIVNNLLENQISSNNNEGMPNFNLSSLLSSTISSSTLTTSNSLSSTSFVNGNTEDERDTYNSNMLNDSGLL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0290 381 Gene3D - 15 68 - -
Lan9g0290 381 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lan9g0290 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 373 - -
Lan9g0290 381 MobiDBLite consensus disorder prediction 1 15 - -
Lan9g0290 381 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 2 373 - -
Lan9g0290 381 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lan9g0290 381 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lan9g0290 381 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lan9g0290 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lan9g0290 381 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Lan9g0290 381 SMART sant 15 65 IPR001005 -
Lan9g0290 381 SMART sant 68 116 IPR001005 -
Lan9g0290 381 Gene3D - 71 118 - -
Lan9g0290 381 CDD SANT 71 114 IPR001005 -
Lan9g0290 381 MobiDBLite consensus disorder prediction 346 381 - -
Lan9g0290 381 CDD SANT 18 63 IPR001005 -
Lan9g0290 381 MobiDBLite consensus disorder prediction 1 21 - -
Lan9g0290 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0290 Lan-Chr9 3835363 3838019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0290 2 131 MYB Transcription Factor Family AT4G05100 79.231 3.21e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g0290 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0290 K09422 - gmx:100820398 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0206 19 2041458 2043906 Lan9g0290 9 3835363 3838019 LSH