Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0287 ATGGTAAAATTCTCTTCAAATTCACTTCAAAACTTCACCTCTCTCAATTCCTCTCCCCATACAACCACTCCTTCTCTCTCTTCCATGGCTACTCCTAACACCATCTTTCACCAACCCAACTCACATTCTTCACTCACCTACTACTACACCACCACCAGCGACGACGACGAAGACACCAACATCATTGACAGCGACATGGACGAGAATGAAGAAAACCACAAAAACGAAAACACACAACACACTAAAAACACTAACACCAACAACATTTCTACACGGTGGTGCTTACCCGTCGCAACAACCACCGTGAGAAAGTTTCTATCCGACCCAAAATGGGTCGAAGAATGGAACAGGGTTTTCCTTCTGGTTTGTGCTGCAGGGTTATTCGTGGACCCATTATTCTTCTACGCGCTCTCAATAAGTGACACGGGTATGTGTCTTTTCGTTGATGGGTGGTTCGCCGTCACGGTCACGGTGTTGAAGTGCATGACGGACACGTTGCACGTTTGGAATATGTGGTTGCAGATGAAGATGAAGAAACGATGGTTTAGTTTGGTTGGAGATGGTGAAAGTGGTGGTTATTACAGTAGTACACATGGCAATGTTGCTGTGAGTTATCTGAAGAGAGGGTTCTTCTTTGACCTATTTGTCATCCTTCCACTGCCACAGATTGTGCTATGGATTGTGATCCCTTCTTTGTTGGAGAAAGGATCAATTACATTGGTGATGACAGTGTTCTTAATTATGTTCCTCTTTCAATACCTTCCCAAAATTTATCACTCAATATGTGTCATGCGTCGCATACAAAATCTCACTGGCTACATTTTTGGAACCATTTGGTGGGGTTTTGCCCTCAACATGATTGCATATTTTGTTGCTTCACATGCTGCAGGGGCATGTTGGTACTTGCTAGGAATCCAAAGAGCAGTTGAATGTCTTGAAGATCAGTGTGGGAAAACCAATGGTTGTGGACTGAAAACACTGTCTTGTAAACAACCTATATACTATGGAACCACTACTATGGTGAGAGACAAAACAAGGTTGTTGTGGGCTAAGAATAGAGAAGCAAGGTCTACATGCTTAGATGACCCTAACAACTATGACTATGGTTTTTATGAATGGGTTGTTCAACTTGTAACAAATGATAGCCGAATGGAGAAGATTCTTTTCCCAATCTTTTGGGGTCTAATGACTCTCAGCACTTTTGGGAACCTACAAAGCACAACGGAATGGCTAGAAGTGGTTTTCAACATTATTGTGTTGATTAGTGGGCTTCTTCTAGTCACCATGTTGATAGGAAACATAAAGGTGTTTTTGAATGCTACAACATCAAAGAAGCAAGCAATGAAATCTAGGATGAGGAACATAGAATGGTGGATGAGGAAAAGGCATTTGCCACAAGGGTTCAGACACCGTGTGCATAACTTCGAGTGGCAACGTTGGGCTGCAATGCGTGGTGTTGATGAATCCCAATTGATACAAGATCTCCCTGAAGGGTTAAGAAGGGACATCAAATACCATCTTTGTTTAGATTTGGTGCGACAGGTGCCCTTATTTCAGCATATGGATGATCTAGTCCTAGAGAACATTTGTGACCGTGTGAAGTCTCTCGTATTCACAAAGGGAGAAATAATATCAAGAGAAGGAGACCCGGTTCAAAGAATGCTATTTGTAGTAAGGGGTCACCTTCAAAGCAGCCAAGTCCTACGAGATGGGGTTAAAAGTTGCTGCATGTTAGGCCCTGGTAACTTCAGTGGTGATGAGCTTCTCTCATGGTGTTTAAGAAGGCCATTTATAGAAAAACTCCCACCATCTTCATCAACTTTGGTCACACTTGAAACCACAGAAGCATTTGGTCTTGAAGCAAATGATGTAAAATATGTAACACAACATTTTAGGTACATTTTTATGAAGGAAAAAGTTAAAAGAAGTGCAAGATATTACTCACCTGGATGGAGAACTTGGGCTTCTGTGGCAATTCAATTGGCTTGGAGAAGGTATAAGCATCGTTTGACTTTGAATTCTTTGTCATTTATAAGGCTTCGTAGACCTATCTCAAGAAGTTCTTCAATGGAAGAAGATAGACTTAGGCTCTATACTGCTTTGTTAACTTCAGCAAAGCCTAATCAAGATGATTTTGAGTTATGTGATTGA 2151 0.4156 MVKFSSNSLQNFTSLNSSPHTTTPSLSSMATPNTIFHQPNSHSSLTYYYTTTSDDDEDTNIIDSDMDENEENHKNENTQHTKNTNTNNISTRWCLPVATTTVRKFLSDPKWVEEWNRVFLLVCAAGLFVDPLFFYALSISDTGMCLFVDGWFAVTVTVLKCMTDTLHVWNMWLQMKMKKRWFSLVGDGESGGYYSSTHGNVAVSYLKRGFFFDLFVILPLPQIVLWIVIPSLLEKGSITLVMTVFLIMFLFQYLPKIYHSICVMRRIQNLTGYIFGTIWWGFALNMIAYFVASHAAGACWYLLGIQRAVECLEDQCGKTNGCGLKTLSCKQPIYYGTTTMVRDKTRLLWAKNREARSTCLDDPNNYDYGFYEWVVQLVTNDSRMEKILFPIFWGLMTLSTFGNLQSTTEWLEVVFNIIVLISGLLLVTMLIGNIKVFLNATTSKKQAMKSRMRNIEWWMRKRHLPQGFRHRVHNFEWQRWAAMRGVDESQLIQDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGEIISREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIEKLPPSSSTLVTLETTEAFGLEANDVKYVTQHFRYIFMKEKVKRSARYYSPGWRTWASVAIQLAWRRYKHRLTLNSLSFIRLRRPISRSSSMEEDRLRLYTALLTSAKPNQDDFELCD* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0287 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 43 711 - -
Lan9g0287 716 ProSiteProfiles cAMP/cGMP binding motif profile. 517 620 IPR000595 -
Lan9g0287 716 SUPERFAMILY Voltage-gated potassium channels 114 438 - -
Lan9g0287 716 CDD CAP_ED 517 637 IPR000595 -
Lan9g0287 716 SUPERFAMILY cAMP-binding domain-like 443 637 IPR018490 -
Lan9g0287 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 43 711 - -
Lan9g0287 716 SMART cnmp_10 517 646 IPR000595 -
Lan9g0287 716 Gene3D Helix hairpin bin 442 508 - -
Lan9g0287 716 MobiDBLite consensus disorder prediction 1 34 - -
Lan9g0287 716 Gene3D Jelly Rolls 515 633 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0287 Lan-Chr9 3765414 3773021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0287 108 713 Ion Channels AT5G54250 76.059 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0287 K05391 - zju:107430493 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0961 5 22799622 22806771 Lan9g0287 9 3765414 3773021 LSH