Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0283 ATGGTATTATTGGTGATGATGATGACGACGAAACTTGTGAAGTTGGTTTTTTCGGTTTTTGTTGTTTTTCTGTTTTCGGTTAATGCATCATTTGCTTTGTACATTCCCCTTGATAATTATTTGATTGCTTGTGGTTTCTCACAAAACATCACTTTTCAAGGCCATACTTATATTCCTGATTCACAATATTCTTCACTTGTGTCCAAAACTGGGGATTCTATAGTTGCTATTTCCAATTCTAGTGTTGTTCCATTACCAATTTATCAATCAGCTAGGATTTTCACCCAGAAAGCTTCATATACATTTGTAATTGAGCAAGAAGGGAGGCACTGGGTTAGGCTATATTTTTATCCGGTTCCGAACTCTGACCATGATTTGAATTCTGCTGTTATAACTGTTGTTGCTGATGAATTTGTTCTCTTGAGCAACTTCACTTTCAGGAACTATAATGGTTTATATATGTTTAAGGAATATGCTATCAATATTACCTCTGTCACCTTGACTGTGACCTTTATTCCTTCGAACGGTTCGGTAACATTTGTCAATGCAATTGAAGTTGTGTCAATGCCAGATGAGTTGTTTATTGATCAGGCATTGGCCATTAACCCACCAGCTCCATTTAGTGGTCTTTCTGAACTGGCTTTCGAAACCGTTTACCGGTTAAACGTTGGTGGTCCCTTGCTTAATGCGCAAAATGACACCCTAGGAAGAACTTGGGAGAGTGATATGAAATACCTTTATATGAACAGCTCAGTCACTATTGTGTCAGTCAGTCCTTCCACCATTAAATATCCTGCAGGAGTTACACCCAAGACGGCGCCGAATTGGGTCTATGCCACTGCTGATGCAATGGGGGATGCAAATGTAGCTGATTCTAATTTCAACATTACTTGGGTTTTTCCGGTGGATCCGAACTTCTCATATTTTATTCGGGTGCACTTTTGTGATATTATAAGCAAGTCACTCAATTCTTTGTTGTTCAATTTATTCATAAATACTGACATAGCTCTTGGAAACCTCGATCTCTCGTCGCTAACTAATGACTTGGCTGTGCCTTACTATAAGGACTTTGTTTCCAATGTCTCAGCAGGCTCCGAGACTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGACATCACAAATGCTACTTTGAATGGATTAGAGATAATGAAGATCAGCAATGCATTGAAGAGCTTTGACGGATTTTCTTCAGTTGGAATTCTCCTTCCTAATTCACCATCAAAAAAGAAAAAGATGGGAATAGTAGCTGGTTTTGTTGTGGCTGTAGCTGCCATAGCATTGGTTGGTTTGTGTTATTGCTGTTTCGTGGGACGCAATTCGAAGTCTACTCAACAAGGTCGTCCGTTATTGTCTTTACCCTCCTTATATGGAAACTTTCAGACCATGTCAATGATGTCTACAACTTCACATAAGAGTGCAACTGCAAGCTGCATTTCTTTATCTTCAATAAATCTCGGAAGGATCTTCACTTTCCAAGAAATCCAAGATGCATGCAACAAATTTGATGAGAAGTTGCTTCTTGGTGTGGGTGGTTTTGGCAGGGTTTATAAGGGAACACTTGATAATGGGACTAATGTAGCAGTTAAAAGGGGGAATGCAAGCTCTGAACAAGGTATTGCTGAATTTCGAACAGAAATTGAAATGTTATCCAAGCTTCGCCACCGTCATCTCGTGTCTCTAATTGGTTATTGCGACGAGAGGTCAGAAATGATTCTTGTCTATGAATGCATGTCTAATGGACCACTCAGAAGTCATTTGTATGGAACTGACTTGCCACCTCTATCATGGAAGCAACGGCTTGAAATTTGCATTGGATCAGCAAGAGGCCTTCATTATCTTCACACCGGTGCATCTCAAAGCATCATTCACCGTGATGTGAAGACAACAAACATCCTTTTAGACGATAACTTTGTTGCCAAAGTTGCTGATTTTGGCCTCTCCAAAACTGGTCCTTCTCTTGATCAGACTCATGTGAGCACCGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCGGAATACTTTAGAAGACAACAACTTACAGAGAAGTCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTGTTATGCACAAGACCGGCCTTGAATCCAGTCCTTCCGAGGGATCAGGTTAACATAGCTGAGTGGGCAATGAGTTGGCAGAAAAAAGGGATGCTTGATCAAATCATTGATAAAAAGCTGATAGGGAATGTTAATTCTGCTTCTCTTAAGAAGTTTGGAGAGACAGCCGAAAAGTGCTTGGCCGAGTATGGCGTGGATAGGCCATCTATGGGAGACGTCTTGTGGAATCTTGAATATGCATTGCAGCTCCAAGAGACCGCCTCATCAGCACTCATGGAACCTGAAGATAGCAGCACAAATCACATCATTGGAATTCAGTTGTCTCCTCTTCAGAATTTTGACAACGGCGTTCGTATGACTGATGGCGGAACTTCTGCCACCAATGATGATGATGATGCAGGACATGCTACAACAAGTGTAGTTTTCTCAGAGTTGGTAAATCCTCGTGCAAGATGA 2562 0.4071 MVLLVMMMTTKLVKLVFSVFVVFLFSVNASFALYIPLDNYLIACGFSQNITFQGHTYIPDSQYSSLVSKTGDSIVAISNSSVVPLPIYQSARIFTQKASYTFVIEQEGRHWVRLYFYPVPNSDHDLNSAVITVVADEFVLLSNFTFRNYNGLYMFKEYAINITSVTLTVTFIPSNGSVTFVNAIEVVSMPDELFIDQALAINPPAPFSGLSELAFETVYRLNVGGPLLNAQNDTLGRTWESDMKYLYMNSSVTIVSVSPSTIKYPAGVTPKTAPNWVYATADAMGDANVADSNFNITWVFPVDPNFSYFIRVHFCDIISKSLNSLLFNLFINTDIALGNLDLSSLTNDLAVPYYKDFVSNVSAGSETLTVSVGPDTMADITNATLNGLEIMKISNALKSFDGFSSVGILLPNSPSKKKKMGIVAGFVVAVAAIALVGLCYCCFVGRNSKSTQQGRPLLSLPSLYGNFQTMSMMSTTSHKSATASCISLSSINLGRIFTFQEIQDACNKFDEKLLLGVGGFGRVYKGTLDNGTNVAVKRGNASSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYECMSNGPLRSHLYGTDLPPLSWKQRLEICIGSARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMSWQKKGMLDQIIDKKLIGNVNSASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETASSALMEPEDSSTNHIIGIQLSPLQNFDNGVRMTDGGTSATNDDDDAGHATTSVVFSELVNPRAR* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0283 853 SMART serkin_6 509 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0283 853 PANTHER OS07G0166700 PROTEIN 26 835 IPR045272 GO:0004714|GO:0006468
Lan9g0283 853 Pfam Malectin-like domain 42 393 IPR024788 -
Lan9g0283 853 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 26 835 - -
Lan9g0283 853 Gene3D - 213 395 - -
Lan9g0283 853 Gene3D - 39 190 - -
Lan9g0283 853 SUPERFAMILY Protein kinase-like (PK-like) 487 780 IPR011009 -
Lan9g0283 853 Pfam Protein tyrosine and serine/threonine kinase 514 775 IPR001245 GO:0004672|GO:0006468
Lan9g0283 853 ProSiteProfiles Protein kinase domain profile. 509 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0283 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Lan9g0283 853 Gene3D Phosphorylase Kinase; domain 1 467 583 - -
Lan9g0283 853 CDD STKc_IRAK 515 780 - -
Lan9g0283 853 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Lan9g0283 853 Gene3D Transferase(Phosphotransferase) domain 1 585 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0283 Lan-Chr9 3717842 3721012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0283 32 807 Receptor kinase-like Gene Family AT2G21480 53.248 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan9g0283 Malectin_like 4.4e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0283 - - lang:109357111 1626.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0199 19 1961540 1966656 Lan9g0283 9 3717842 3721012 LSH
Lan5g0948 5 22674758 22677625 Lan9g0283 9 3717842 3721012 LSH