Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0275 ATGGAGAGCACTGACTCATCCACCGGTTCACAACAACAACAACCGAACCTTCCACCCGGGTTCCGGTTCCACCCCACGGACGAGGAGCTCGTGGTTCTGTACCTGAAGAAGAAAACTGCCTCAGCTCCTCTTCCAGTTCACATCATCACTGAGATTGATCTATATAAGTTTGATCCATGGGAGCTACCAGCTAAGGCAGTGTTTGGGGAGCATGAGTGGTATTTCTTTACTCCTAGGGATAGGAAGTATCCCAATGGTGCAAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAGGCCACAGGGACAGACAAGCCTGTATTAACATCTGGTGGGACCCAAAAGGTTGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAGAGGGATCAAAACCAATTGGATCATGCATGAATATAGGCTTGTTGATAACAAACCTAACAATAAGCCTCTTGGTTGTGACTTGGACAACAAGAAAAACTCTCTTAGGCTTGATGATTGGGTACTATGCCGAATCTACAAGAAGAACAATACACATAGGCCCCCTTTGGAACATGAAAAGGAAGATTCAATGGATGAGAGGTTTTATCTTTCAAAAATGTCCACAAGCTATACTAATGCATTGTTGCAAAATGACCAAAACTTATTGGAAGGAATGGTCCTAAATAATGGTTTGGGATCATCAAGCTCTAAGGTTGAGTTTCCTTTTGTGCCAACTATCACTTCCTCGTCAAACAATACTAATTCTGCCGCATCCAAAATAACATTCTCATCTCTGTATTGGAATGATGATCAAGATGTGGTAGTGGCAGGAACCTCGTCAACAAACAAAGGGTTTAGTTCGGAAAATGGTGAACATGATCGAAGTATTGTGTCGACCGAAGAGAATAATGGTATTGGTACCTCTTTTGCCACTCTCCTTAATCAACACCCTCAAAACTCTTCATTGCATCAACAACAAACAATGATTGGATCATTAGGTGATGGAATACTTAGAACAACACCATATCAAATAGGTGGAATCAATTGGTATGCTTAA 1047 0.426 MESTDSSTGSQQQQPNLPPGFRFHPTDEELVVLYLKKKTASAPLPVHIITEIDLYKFDPWELPAKAVFGEHEWYFFTPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNKPLGCDLDNKKNSLRLDDWVLCRIYKKNNTHRPPLEHEKEDSMDERFYLSKMSTSYTNALLQNDQNLLEGMVLNNGLGSSSSKVEFPFVPTITSSSNNTNSAASKITFSSLYWNDDQDVVVAGTSSTNKGFSSENGEHDRSIVSTEENNGIGTSFATLLNQHPQNSSLHQQQTMIGSLGDGILRTTPYQIGGINWYA* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0275 348 PANTHER NAC TRANSCRIPTION FACTOR 56 1 322 - -
Lan9g0275 348 MobiDBLite consensus disorder prediction 1 19 - -
Lan9g0275 348 ProSiteProfiles NAC domain profile. 17 178 IPR003441 GO:0003677|GO:0006355
Lan9g0275 348 SUPERFAMILY NAC domain 9 178 IPR036093 GO:0003677|GO:0006355
Lan9g0275 348 MobiDBLite consensus disorder prediction 1 22 - -
Lan9g0275 348 Gene3D NAC domain 26 183 IPR036093 GO:0003677|GO:0006355
Lan9g0275 348 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 322 - -
Lan9g0275 348 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0275 Lan-Chr9 3566778 3569760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0275 1 348 NAC Transcription Factor Family AT3G15510 53.243 2.55e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan9g0275 NAM 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0275 - - vra:106763825 503.056