Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0262 ATGGCTGATTTAGCGGGTCTAGCTGAGGCAGCAGGGTCAAGATTCAGTTCATTGGAGCTTATCGGGCAAGGATCATTTGGTGATGTCTATAAAGCTGAAGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTTTCACAATGTCGATCTCCATACATTACCGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCGGATCTACTTCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGACTTGCTCCATGCCATTGATTACCTACATAGTGAAGGAAAAATTCATAGAGACATAAAAGCTGCCAACATCTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTAACAAGGACTATATCACAGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATTCAGAAGGATATAACGAGAAGGCAGATATCTGGTCTCTAGGGATCACTGTCATTGAGATGGCTAAAGGGGAGCCTCCACTTGCTGATCTCCACCCTATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCTCCGCAGCTAGATGAGCATTTTTCTCGTCCCTTAAAAGAATTTGCTTCGTTGTGTTTGAAGAAGGTCCCTGCTGAGAGGTCAAGTGCTAAAGACCTTCTCAAACACCGTTTCATTCGGTATGCTAGGAAGAGTCCCAAGCTTTCTGAAAGAATAAGGGAGCGTCCTAAATACCAAATAAAGGATGATCAGGAGACACCTGAAAATGGGCGGAGAGGGATGGGGGAGGCATCTGATACTATGAAGGTGCCGAGAGATTCAAGAGTTGAAGAAACTAATTGGCCTAGTGATCAGGGTAAAACCATGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACCGGAACTTTTCGTAGTGTTTTACGACCATCTCAATTTAGAGATAAGAAAGCTGAAGTTTCAAATAATCAGCTTACCGAAAGAAAAGCTCCAGAGAGTGGCTATCAAGGGGGATTTGCTAATAGAAGTGCACCTAATGAATCACTTGAAAGCTCGTTTGGAAAAGATCCCGGAGTTTCCTACCACGATGAGCATCTGGCTAATCTTGAAGATGATGAATTGTCTGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGCCATCGGGGCTTCGTGACCAGAGCTCCCAGTCTAGCAGCAGTTATGCCTCTTTTGAAGATACTTCTATGACTACCAGTGGAACTGTTGTTTTTCGTAACCACCGTGATGATTCTGGTTCTCTAGAGATACCAAATTCCCGAGTGGGACTTCATGACAGAAATTCAAATACCTCATTGGAAGACAGTGCTGCGAATCTTTCCGAGGCAAAGGCTGCTATCCAAGGAGGACTAAGGAAAGGCAATGCTCGCGAGAGATTTGCACCGGGGAAAACTAACAATCAACAAGAAAGCAAGAGAGAAATGACGAGCAGCTCTGGTTCTTCGAGACCATCATCACAAAAGGGCATGTCAAGATCACATTATTCTAGTGGTAATAAAGAAAGTGCTAAAATAATATCATCCTCTGCACCGTTATCAGCTTTGCTCATTCCTTCAATAAAAGAGGCTATTGCTGATGATCCAGAAGGGTCAGTTATCAATTCTCTCATAAACATGGAGAGCACAAATCCTAGATCTTCTGATGTTCTTGTCAAAAAGTTGCTTCAGAAGTTGGCAAGTTCAAAGAAAGATTCATTGAAAGATCTGCAGGAATTTGCAGTTCAACTATTCAGCAAGACTAAGTTATCTGATACAGATTCTGATAACTACAAGAAACAATTGAATAAGGAACTTCATCCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCAAGGGATCTGAACCCATCTTGA 2001 0.4203 MADLAGLAEAAGSRFSSLELIGQGSFGDVYKAEDEIDDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISQRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITVIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFASLCLKKVPAERSSAKDLLKHRFIRYARKSPKLSERIRERPKYQIKDDQETPENGRRGMGEASDTMKVPRDSRVEETNWPSDQGKTMKNSGWDFSIGGSQGTGTFRSVLRPSQFRDKKAEVSNNQLTERKAPESGYQGGFANRSAPNESLESSFGKDPGVSYHDEHLANLEDDELSGSGTVVIRSPKGSRPSGLRDQSSQSSSSYASFEDTSMTTSGTVVFRNHRDDSGSLEIPNSRVGLHDRNSNTSLEDSAANLSEAKAAIQGGLRKGNARERFAPGKTNNQQESKREMTSSSGSSRPSSQKGMSRSHYSSGNKESAKIISSSAPLSALLIPSIKEAIADDPEGSVINSLINMESTNPRSSDVLVKKLLQKLASSKKDSLKDLQEFAVQLFSKTKLSDTDSDNYKKQLNKELHPNSNLSPLARFLLSRWQGQTSRDLNPS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0262 666 MobiDBLite consensus disorder prediction 287 302 - -
Lan9g0262 666 MobiDBLite consensus disorder prediction 259 281 - -
Lan9g0262 666 SUPERFAMILY Protein kinase-like (PK-like) 12 249 IPR011009 -
Lan9g0262 666 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 664 - -
Lan9g0262 666 Gene3D Transferase(Phosphotransferase) domain 1 12 283 - -
Lan9g0262 666 MobiDBLite consensus disorder prediction 303 333 - -
Lan9g0262 666 ProSiteProfiles Protein kinase domain profile. 15 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0262 666 MobiDBLite consensus disorder prediction 382 396 - -
Lan9g0262 666 MobiDBLite consensus disorder prediction 489 542 - -
Lan9g0262 666 SMART serkin_6 15 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0262 666 MobiDBLite consensus disorder prediction 259 472 - -
Lan9g0262 666 MobiDBLite consensus disorder prediction 501 542 - -
Lan9g0262 666 Pfam Protein kinase domain 35 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0262 666 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 664 - -
Lan9g0262 666 MobiDBLite consensus disorder prediction 415 447 - -
Lan9g0262 666 CDD STKc_MST3_like 13 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0262 Lan-Chr9 3427317 3436605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0262 1 663 MAP Kinase Kinase Kinase Kinase AT3G15220 59.914 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lan9g0262 Pkinase 4.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0262 K08838 - gmx:100815042 978.778