Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0247 ATGGCAGGAGTGGGACCCATATCACAGGATTGGGAACCGGTGGTGATAAGGAAGAAGGCACCAACCGCTGCGGCGAAGAAGGATGAGAAGGCTGTGAACGCTGCTCGTCGTTCTGGCGCTGAGATTGAAACCGTCAAAAAATCAACTGCTGGAACAAACAGAGCCGCCTCTAGTAGCACTACTCTGAACACAAGGAAGCTGGATGAAGAAACTGAGAATCTTCACCATGAAAGGGTACCAACTGAGTTGAAGAAAGCCATCATGCAGGCTAGGCTGGAGAAAAAACTCACTCAGGCTCAGCTGGCTCAGATGATTAATGAAAAGCCTCAGATCATACAAGAGTATGAATCCGGAAAAGCCATTCCAAATCAACAAATAATTGGAAAACTCGAGAGAGCTCTCGGTGAGAAACTGCGTGGAAAGAAGTGA 429 0.4755 MAGVGPISQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGAEIETVKKSTAGTNRAASSSTTLNTRKLDEETENLHHERVPTELKKAIMQARLEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQIIGKLERALGEKLRGKK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0247 142 MobiDBLite consensus disorder prediction 45 64 - -
Lan9g0247 142 MobiDBLite consensus disorder prediction 65 79 - -
Lan9g0247 142 CDD HTH_XRE 85 135 IPR001387 -
Lan9g0247 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lan9g0247 142 MobiDBLite consensus disorder prediction 21 43 - -
Lan9g0247 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Lan9g0247 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 137 IPR010982 GO:0003677
Lan9g0247 142 Coils Coil 87 107 - -
Lan9g0247 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Lan9g0247 142 MobiDBLite consensus disorder prediction 20 79 - -
Lan9g0247 142 Pfam Helix-turn-helix 87 138 IPR001387 -
Lan9g0247 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Lan9g0247 142 SMART mbf_short4 86 141 IPR001387 -
Lan9g0247 142 Gene3D - 71 142 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0247 Lan-Chr9 3243787 3246444 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lan9g0247 MBF1 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0247 K03627 - qsu:112033276 257.299