Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0239 ATGAACATAAATTACCCTGGTTTCTTCTTCCTTATGCTACTTGCTACCTTTTACTTACCCTCTTTAGCTTCTGGAGCCACTTTATCCAATGATGAAGTGGAAGCTCTGAAACAGATAGCAAAGACACTTGGAAAAAAAGATTGGGATTTTAGCGTAGATCCATGCAGTGGACAACGTAACTGGACATCACTTGATCAAGTTGAAGTCACAGAAAATGCTGTCACATGCAATTGCTCTTTTGCCAATGCAACCATCTGCCATGTTACTAACATACTTCTGAAACAACAAAATCTACCAGGCACACTTCCTCCAGAATTAGTAAGGTTACCTTACCTTCAAGAAATTGACCTTACTCGCAACTACTTGAGTGGCAAAATTCCAGAAGAATGGGGCTCCATGAAATTAATCAACATTTCTTTGCTTGGAAATCGAATAACAGGTTCAATACCTATACAGATAGCAAACATATCCACCCTACAAAGCTTTGTTGTGGAGGCCAATCAGTTATCTGGAAAGCTACCTGCTGAGCTTGGGAATCTATCTCAGATTCAAAGAATGCTACTTTCTTCCAACAATTTTACTGGAGAGATACCTCCAACATTTGCCAAGCTCACTTCATTGCAGGATTTTCGAATTCCAGACAATCAATTCTCTGGGAAGATCCCTGATTTTATTCAATCTTGGACAAGTCTCCAGAAACTAGTGATTCAAGGGAGTGGATTGAGTGGGCCAATTCCTTCTGGAATTTCACTTATGGAAAACTTAACTGACTTGAGAATTAGTGATTTGAAAGGATCTGAGTTTTCACCATTTCCAAACCTTAATAATCTGCCATTGCACCATCTGATTTTGAGGAGTTGCAACATTAATGGAACACTTCCTGAAAATCTTGGGGCAATGGATAATTTAAAAACCTTAGATCTCAGCTTTAACAAATTGAGTGGACAAATCCCAAGTACATATGATGGCTTAAAAAAAGCGACATACATATATTTAACTGGAAACCTTCTCACTGGACTAGTGCCTACATGGACAAAAAAAGTTAAAAATATGGATATTTCATATAATAACTTTAGTATAGGAAGTAATGGGATTGAGGCATGTCAAGATGGAAATGTGAACTTATTTGCTAGCACTTTAATGTCCAATGACTCAGGAAAAGTTTCATGTTTGAGAAGCTTTGCATGTCCTAAAACCTCATACTCTCTTCATATAAATTGTGGTGGAAGGATGGTAACAATCAATGAAAGCACATATGATGATGATTCAGATACTGCAGGACCAGCTAGGTTCCAACAGAGTGGAACAAGAATCTGGGGTTTTAGCAATACTGGTAACTTCATGGATAATGATAGTTCAGACTATTACACTACTCCGAGTCAATCTAATCTTTCTATGACGAATGCTGAACTATACATGAATGCACGTATTTCTCCCATTTCTCTCACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACTGTTAATCTACATTTTGCGGAGATCATGTTCACTGATGATCAAACATATAACAGCTTAGGAAGGCGTTTATTTGACATCTACATCCAGGGGGAATTGGTTAAGAAGGACTTCAATATTGCAGAAGAAGCAGGAGGGGTTGGTAAGGCAATTACAAAACCCTTCCCTGCTATTGTGACTAATACTACCTTGGAGATCCGTTTATATTGGGCTGGAAAAGGAACTACTTCTCTTCCACATAGATCAGTTTATGGTCCTCTTATATCAGCTATATCTGTGAAATCTGACTTTATGCCCCCCTCGGAAAATGGAAGTAGCATAGGTGCAGGAGCTTTGGCTGGAATTGTGGTCGCAGTAGCAGTTATTGCTGCCGTGGTAATTGGCATACTTTGGTGGAAATGTTGTCTAGGAAAGAAAAACACTTTAGGAAAAGAGATAAGGGGCTTAGATCTACATACGTCGATATTTACCCTACGACAAATCAAAGCAGCAACAAACAACTTCAATACTGCCAATAAGATTGGAGAAGGAGGATTTGGACCTGTGTTCAAGGGAATTCTATCAGATGGGACAATAATAGCAGTCAAGCAGCTTTCTTCGAAGTCAAAGCAAGGGAATCGTGAATTTTTAAATGAAATTGGAATGATTTCTGCATTGCAGCACCCCTATCTTGTTAAACTCTATGGTTGTTGTGTTGAGGGAGATCAGCTATTGTTGGTATATGAATATTTGGAAAATAATAGCCTTGCTCGTGCATTATTTGGCTCAGGAGAACATCAAATCAAATTGGATTGGCCCACAAGACACAAAATATGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTTAATCCTAAGATATCTGACTTTGGTTTAGCGAAGCTTGATGAAGAAGAAAACACTCATATTAGCACCCGAATTGCTGGGACATATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCCTTGGAAATCGTAAGTGGGAAGAACAATACCACTCGCCGACAAAACGAAGAAGCACTACTTCTTCTTAATTGGGCAAATCTGTTGAAAAAGGAAGGTAATCTAATGGAGCTAGTTGATAGAAGATTGGGTTCAGATTTCAACAAAGAGGAGGTAATGGTGATGATAAATGTGGCTCTCCTATGCACCAATGTGACTCAAACACTAAGGCCTGCAATGTCTTCAGTTGTAAGCATGCTAGAAGGTAGAAGTGTTGTACATGAAGTGGTTTCAGACTCAAGTGAGTTATTATTGGATGAGAAGATGGAGGCAACGAGACTACATTACAAAGAGATCCAAGAACATAGTAGTACCTCAATGGAGGGGCCATGGACTGCTTCATCAAATTCTGCAGCAGATCTATATCCTGTGCATTCTTCTTACTTGGAAGGGAGAAATTAG 3000 0.39 MNINYPGFFFLMLLATFYLPSLASGATLSNDEVEALKQIAKTLGKKDWDFSVDPCSGQRNWTSLDQVEVTENAVTCNCSFANATICHVTNILLKQQNLPGTLPPELVRLPYLQEIDLTRNYLSGKIPEEWGSMKLINISLLGNRITGSIPIQIANISTLQSFVVEANQLSGKLPAELGNLSQIQRMLLSSNNFTGEIPPTFAKLTSLQDFRIPDNQFSGKIPDFIQSWTSLQKLVIQGSGLSGPIPSGISLMENLTDLRISDLKGSEFSPFPNLNNLPLHHLILRSCNINGTLPENLGAMDNLKTLDLSFNKLSGQIPSTYDGLKKATYIYLTGNLLTGLVPTWTKKVKNMDISYNNFSIGSNGIEACQDGNVNLFASTLMSNDSGKVSCLRSFACPKTSYSLHINCGGRMVTINESTYDDDSDTAGPARFQQSGTRIWGFSNTGNFMDNDSSDYYTTPSQSNLSMTNAELYMNARISPISLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYNSLGRRLFDIYIQGELVKKDFNIAEEAGGVGKAITKPFPAIVTNTTLEIRLYWAGKGTTSLPHRSVYGPLISAISVKSDFMPPSENGSSIGAGALAGIVVAVAVIAAVVIGILWWKCCLGKKNTLGKEIRGLDLHTSIFTLRQIKAATNNFNTANKIGEGGFGPVFKGILSDGTIIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLVYEYLENNSLARALFGSGEHQIKLDWPTRHKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGKNNTTRRQNEEALLLLNWANLLKKEGNLMELVDRRLGSDFNKEEVMVMINVALLCTNVTQTLRPAMSSVVSMLEGRSVVHEVVSDSSELLLDEKMEATRLHYKEIQEHSSTSMEGPWTASSNSAADLYPVHSSYLEGRN* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0239 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 359 - -
Lan9g0239 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 382 974 - -
Lan9g0239 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 290 - -
Lan9g0239 999 CDD STKc_IRAK 668 935 - -
Lan9g0239 999 Pfam Protein kinase domain 663 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0239 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Lan9g0239 999 Gene3D Phosphorylase Kinase; domain 1 631 737 - -
Lan9g0239 999 Gene3D - 398 590 - -
Lan9g0239 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 359 - -
Lan9g0239 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 290 - -
Lan9g0239 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 974 - -
Lan9g0239 999 Gene3D Ribonuclease Inhibitor 267 375 IPR032675 -
Lan9g0239 999 Pfam Malectin domain 402 585 IPR021720 -
Lan9g0239 999 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515
Lan9g0239 999 Gene3D Transferase(Phosphotransferase) domain 1 738 948 - -
Lan9g0239 999 SUPERFAMILY L domain-like 82 359 - -
Lan9g0239 999 SUPERFAMILY Protein kinase-like (PK-like) 646 942 IPR011009 -
Lan9g0239 999 SMART serkin_6 662 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0239 999 Gene3D Ribonuclease Inhibitor 199 266 IPR032675 -
Lan9g0239 999 ProSiteProfiles Protein kinase domain profile. 662 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0239 999 Gene3D Ribonuclease Inhibitor 29 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0239 Lan-Chr9 3124406 3146418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0239 22 986 Receptor kinase-like Gene Family AT1G53420 55.783 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan9g0239 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0239 - - gmx:732563 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0861 5 21485659 21497337 Lan9g0239 9 3124406 3146418 LSH