Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0230 ATGCATGGCAGTGAGCTATATGTGCCATATAAAGCAGCTTACACGAGGATTCCACTACTTCCTCTTTTTTCTTCTCTCACTTTGTTAATTCTCTGCCACCCAGATTCTTCAGATTTCCCACTCTTTCGTACCCTCTCTTTAAAACCCTCACACCCTTACCCATCTACAAATAAGTGCAACCATTTTTCTCTCTTGCTTTCACCACCCCTTACACTTTTAATCTCTTCTTCATTCCCCGGAAGGAAATTGTACTACTTGAGACATTGCTGTAAAACATCAATGGTTGGGTTCCATGATGATCATATGAATGAAAACATGTATAACAGCAACAATTCTATTTGTTTCCCCGGTCGCGTTGAAAGGCTAGTTAGAGGAAGAGAGTTAAGAAAAAGCAGCAGGGCATTTCTTTCAAATGAGTCACCAGATAATAGCAACAATGAAAACTATAATAATAATATTATCAATGGGGTTACTGAATCTATGGAGCATGACCTGCATTTAAGAGAAGCTAATGGTAATAGTTCAGGTCATACTTCGCATTTCGAACGGTTCCTGGAGGGTGCAGCAGCAGCAAGAGCTTTTACTGATGGGTATGAGAGGGACGATGGAAAGCCTTTTCGACAACGGCTTTTGGTGGTGGCAAATAGGCTTCCAGTTTCAGCCGTTAGGAAAGGTGAGGATTCATGGTCTCTGGAGATAAGTGCTGGTGGTCTAGTGAGTGCTCTTTTAGGTGTGAAGGAATTTGAGGCGAGGTGGATAGGTTGGGCAGGTGTTAATGTGCCAGATGAGATTGGACAAAAAGCACTTACAAAAGCATTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGCCTTGCTACAACTCGTAGTTTCCAGTCTCAGTTTGCCGCATATCAGAAAGCAAACCAAATGTTTGCTGATGTTGTGAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTCCTTCCACAATGCCTAAAGAATCATAACAGCAAAATGAAAGTTGGCTGGTTTCTCCATACCCCTTTTCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCCGAGCTCCTGCATGCTGTTCTCGCAGCAGATTTAGTTGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGTGCATGCACTCGGATCCTTGGACTAGAGGGCACGCCTGAAGGGGTTGAGGATCAAGGGAAGCTAACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCACTGCGATTCATACGTGCACTTGACCTTCCTCAAGTCCAGGAGCACATCAAAGAATTACAAGAAAGATTTAAAGGCAGGAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAGAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTTGTTCTGCTTCAGATTGCTGTGCCAACAAGAACAGACGTTCCTGAGTATCAAAAGCTCACAAGCCAGGTCCATGAAATTGTTGGTCGGATCAATGGCAGATTTGGAACACTGTCTGCTGTTCCTATTCATCACCTGGATCGCTCTCTTGACTTCCAGGCTCTATGTGCTTTGTATGCCATCACAGACGTTGCATTGGTCACATCCTTGAGAGACGGCATGAATCTTGTCAGTTATGAATTTGTGGCATGTCAAGATGAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCAGGTGCTGCGCAGTCTCTTGGTGCTGGTGCAATTCTAGTCAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATAGCCAAAGCTTTGAATATGCCATCTTCAGAAAGAGAGAAACGACATAGGCATAATTATCATTACGTCAAAACCCATACTGCTCAAGAATGGGCAGAAATTTTTGTAAGTGAGCTAAATGATACCGTTGTTGAGGCACAGCTAAGGACAAAACAAGTTCCACCCCGCTTGCCAACCAAGACTGCAATTGAACGTTATTTGCAATCAACTAATCGGTTGCTCATTCTGGGGTTCAATGGAACGTTAACTGAACCTGTTGAGAGAAAAGGTGATCAGTATAAAGAAATGGAACCCACCGTGCATCCAGAACTCAAAGAAGCATTGATAGAACTTTGCCATGACTCAAAGACCACGGTTGTTGTGCTTAGTGGAAGTGGAAGAACGGTTCTAGATGAAAACTTTAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGAATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAGCTAAATATGGAGTGGGTTGACAGCTTGAAGCTTGTTTTTGAATATTTCACGGAAAGAACACCTCGGTCACATTTTGAAGAAAGGGAAGCTTCACTTGTGTGGAATTACAAACATGCAGATGTTGAGTTCGGAAAAATTCAAGCAAGAGAATTGCTGCAGCATCTCTGGACGGGTCCAATTTCTAATGCAGCGATTGAAGTTGTTCAAGGGAGCAGATCTGTCGAGGTGCGAGCTGCAGGTGTTACAAAGGGAGCAGGTATTGACCGGATCCTGGGTGAGATTGTCCATAATAAATCCATGACAACGCCAATCGATTATGTTCTCTGTGTAGGACATTTTCTGACAAAGGATGAAGATATATATTCCTTTTTTGAGCCAGAGCTTCCTTCTATTGGTGTGTGTCTTCCGCGTGGTAAGGTTACAGATGGAACTAAGTTTAATGGTGAGAGGATATCATCTATGAAGACCCCAACACAGAAAAATGGGCTAAAATCGTTGCAAAATATGGCGCAACGGCCTCAAGCAAATGCTGAGAAGAAACAAGTGAATCATATCGCTCGGGCACCAAGGCGGCCAGCTCCTGAAAAGACATCTTGGAATGTGCTTGACCTCAAAAAAGAGAATTACTTCTCGTGCGCGGTCGGAAGAACTCAGACAAATGCTAGGTACACCCTCGGATCCTCAGACGATGTTGTTTCATTTCTGAAGGAACTAGCAGCTACATCTTCTTACTATTCATTCTGA 3135 0.4274 MHGSELYVPYKAAYTRIPLLPLFSSLTLLILCHPDSSDFPLFRTLSLKPSHPYPSTNKCNHFSLLLSPPLTLLISSSFPGRKLYYLRHCCKTSMVGFHDDHMNENMYNSNNSICFPGRVERLVRGRELRKSSRAFLSNESPDNSNNENYNNNIINGVTESMEHDLHLREANGNSSGHTSHFERFLEGAAAARAFTDGYERDDGKPFRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKNHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSLRFIRALDLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLSAVPIHHLDRSLDFQALCALYAITDVALVTSLRDGMNLVSYEFVACQDEKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSSEREKRHRHNYHYVKTHTAQEWAEIFVSELNDTVVEAQLRTKQVPPRLPTKTAIERYLQSTNRLLILGFNGTLTEPVERKGDQYKEMEPTVHPELKEALIELCHDSKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSLKLVFEYFTERTPRSHFEEREASLVWNYKHADVEFGKIQARELLQHLWTGPISNAAIEVVQGSRSVEVRAAGVTKGAGIDRILGEIVHNKSMTTPIDYVLCVGHFLTKDEDIYSFFEPELPSIGVCLPRGKVTDGTKFNGERISSMKTPTQKNGLKSLQNMAQRPQANAEKKQVNHIARAPRRPAPEKTSWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVSFLKELAATSSYYSF* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0230 1044 Pfam Trehalose-phosphatase 712 925 IPR003337 GO:0003824|GO:0005992
Lan9g0230 1044 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 209 674 IPR012766 GO:0003825|GO:0005992
Lan9g0230 1044 Gene3D Glycogen Phosphorylase B; 201 455 - -
Lan9g0230 1044 Gene3D Glycogen Phosphorylase B; 456 659 - -
Lan9g0230 1044 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 140 1036 IPR001830 GO:0003824|GO:0005992
Lan9g0230 1044 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 140 1036 - -
Lan9g0230 1044 Gene3D - 709 920 IPR023214 -
Lan9g0230 1044 CDD HAD_TPP 707 924 - -
Lan9g0230 1044 CDD GT20_TPS 209 674 IPR001830 GO:0003824|GO:0005992
Lan9g0230 1044 Gene3D - 796 876 - -
Lan9g0230 1044 Pfam Glycosyltransferase family 20 209 674 IPR001830 GO:0003824|GO:0005992
Lan9g0230 1044 SUPERFAMILY HAD-like 706 1038 IPR036412 -
Lan9g0230 1044 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 208 677 - -
Lan9g0230 1044 TIGRFAM T6PP: trehalose-phosphatase 705 921 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0230 Lan-Chr9 2992821 3023659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0230 102 1040 Trehalose Biosynthesis Gene Families AT1G78580 75.209 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0230 K16055 - gmx:100789554 1568.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0123 19 1109550 1113938 Lan9g0230 9 2992821 3023659 LSH