Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0225 ATGCAGCAAAATCAGTCCAAAAAGAAGGATATAAAAGAATTGGATTTTTTCAGTGAGTATGGAGATGCTAACAGATACAAGTTTCTCGAAGTTATCGGAAAAGGTAGCTATGGAGTTGTTTGTGCAGCAATTGACACACACACTGGGGAAAAAGTTGCAATAAAGAAGATTCTTGATATTTTCGCGCATATTTCTGATGCTGTTAGAGTCCTCCGTGAAGTCAAGTTGCTAAGGCTTCTTAGACACCCTGATATCGTCGAGATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATGTATGTAGTCTTTGAACTCATGGAGTCTGATCTCCATAAAGTCATCAAAGCTAATGATGACTTGACTCATGAACACCTTCAGTTTTTCCTTTATCAGATGCTGCGCGCGTTGAAGTATATGCATTCAGCAAATGTCTATCACAGAGACCTTAAGCCGAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATCTTGGACTTTCAAGAGTTGCATTCAGTGATGAACCATCAATAGTATTTTGGACGGATTATATCGCGACGAGATGGTACAGAGCCCCAGAGCTGTGTGGATCAGTCACTTACAAGTATACACCAGCAATTGATATATGGAGCATTGGATGCATTGTTGCCGAGGTTCTGAGAGGAAAGGCATTGTTTCCTGGTAAAAATGTGGTGCATCAATTAGTTTTGATGACTGATCTTCTTGGGACACCATCACCAGAAATTATTAAAGGATTTCGAAATAGTAAGGCAAGGAAGTGCTTGACGGAAATGAAGAAGAAACTGCCTGTGCCGTTTGAAAAGGAATTTCCAAATGCTGATCCGTTGGCACTTCGCCTTCTGCAAAGGCTTTTATCATTTGATCCGAAGGATCGGCCGACAGCTGAAGAGGCACTAGCTGACCCTTTCTTTAAGAATTTGGCCAAAGTTGAGAGAGAACCTTCGTGTCCGCCAATTTCGAATTTGGATTTTGAGTTTGAGAGGAGACAGATGACAAAGGAGGATATTCGAGAGCTAGTATATCGGGAAATACTGGAATATCATCCTCAGATGCTTAAAGATTACAAGAATGGAACTGAAGGCATAAACTTCCTTTATCCCAGTGCAATAGATCAATTCAAAAAGCAATTTGCATATCTTGAGGAAAATCAGGGTAAAAGTGACCCAGTGACTCCTCTAGAAAGGAAGCATGTCTCCCTTCCAAGGTAA 1248 0.4046 MQQNQSKKKDIKELDFFSEYGDANRYKFLEVIGKGSYGVVCAAIDTHTGEKVAIKKILDIFAHISDAVRVLREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDMYVVFELMESDLHKVIKANDDLTHEHLQFFLYQMLRALKYMHSANVYHRDLKPKNILANANCKLKVCDLGLSRVAFSDEPSIVFWTDYIATRWYRAPELCGSVTYKYTPAIDIWSIGCIVAEVLRGKALFPGKNVVHQLVLMTDLLGTPSPEIIKGFRNSKARKCLTEMKKKLPVPFEKEFPNADPLALRLLQRLLSFDPKDRPTAEEALADPFFKNLAKVEREPSCPPISNLDFEFERRQMTKEDIRELVYREILEYHPQMLKDYKNGTEGINFLYPSAIDQFKKQFAYLEENQGKSDPVTPLERKHVSLPR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0225 415 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Lan9g0225 415 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan9g0225 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 11 357 - -
Lan9g0225 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 354 401 - -
Lan9g0225 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 354 401 - -
Lan9g0225 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 357 - -
Lan9g0225 415 CDD STKc_TDY_MAPK 25 362 - -
Lan9g0225 415 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0225 415 SUPERFAMILY Protein kinase-like (PK-like) 22 322 IPR011009 -
Lan9g0225 415 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Lan9g0225 415 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0225 415 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lan9g0225 415 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0225 Lan-Chr9 2955267 2958846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0225 1 415 MAP Kinase Gene Family AT2G42880 77.349 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan9g0225 Pkinase 6.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0225 - K04371 rcu:8258703 694.115