Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0222 ATGAAGTTTGTGAATTACATATCACAATGGAGAAGCGCAGCAAAGGAAGCATTAGATCACACTGCAATCACTCTTAAATTCCTCTGTTGGCTTCACGTTACAAACAACTATCTCTGTTCCCCAACTCATGTCTATGGTCCTAGTATGCTCCCAACCCTAAATCTCGCCGGCGATGTGATTCTCGCTGAGCACTTGTCGCCGCGAATTGGGAAGGTTGGCCATGGAGATTTGGTTGTGGTTCGGTCTCCTTTGAACCCGAATCGGAACTTGACGAAGCGAATTGTGGGGATGGAAGGGGATACTGTTACTTTCTTTGATCCTTTGCGTGGTGATGCTACTCAAACTGTAGTGGTACCAAAGGGGCATGTTTGGATTCAAGGAGATAACATCTATGCTTCCCATGATTCGAGGCATTTTGGTCCTATTCCTTATGGTCTTATACAAGGAAAGGTGTTTTTCAGGGTTTGGCCACTTGATGTCTTTGGACGGATAGATCAATGA 501 0.4511 MKFVNYISQWRSAAKEALDHTAITLKFLCWLHVTNNYLCSPTHVYGPSMLPTLNLAGDVILAEHLSPRIGKVGHGDLVVVRSPLNPNRNLTKRIVGMEGDTVTFFDPLRGDATQTVVVPKGHVWIQGDNIYASHDSRHFGPIPYGLIQGKVFFRVWPLDVFGRIDQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0222 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan9g0222 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan9g0222 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan9g0222 166 CDD S26_SPase_I 40 151 IPR019533 GO:0004252|GO:0006465
Lan9g0222 166 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 6 164 - -
Lan9g0222 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 6 164 - -
Lan9g0222 166 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Lan9g0222 166 Pfam Signal peptidase, peptidase S26 27 104 IPR019533 GO:0004252|GO:0006465
Lan9g0222 166 TIGRFAM sigpep_I_bact: signal peptidase I 27 104 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan9g0222 166 Gene3D Umud Fragment, subunit A 34 164 - -
Lan9g0222 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0222 Lan-Chr9 2928961 2934333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0222 49 162 MADS-box Gene Family AT1G29960 54.783 3.20e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0222 K09647 - csin:114274489 248.825