Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0218 ATGTTCTTTTCCATTTTCACACATAAAGTTTCAATCTTTAAACCCGAGTGTAATATGCTTATATTAGTGGGAAACGTGCAAGGAGCAATGAGTTCTCTAGCTTCCCCTGTGAATTTGGGGAACCTAATGTGTGTGAGTTCTTCTAGAAGGTCTCACTCTAGTGTGAGGAGAGTGTCTTTCTCTAGAGGGAGCTCTAAGGGTAAGAAAAATTGGCATTGTGTGTCTTTGTCCATGTGTAGATGTTCGGTTACGACAACTGATTTTGTTGCTGATCAAGGAAATTCAGTGTCCCTTGATTCTAACAGTAGTAGAGAAAGTAGTAATAAGGGTGGAGATGGTGGTGCTGATTTTGTACTTAAGCCTCCCCCTAAGCCTGTTTTGAAGTCGTTGGGTGGGAAGGGTAATGCGATTTTAGGCGTGAACTCGAGGAATAGTGAGGTCGGTGGAGATGTGGAAGAGAGGAACAAAGTGATTGAATCACTTGGAGAAGTGTTGGAGAAGGCGGAAAAGCTGGGGAAAAGTAATCATAAGTTGGATGATGCTAAAAGGAATAACGGGCCGGTGAATAAACCAGTGTTATCTAATGTCAATGCTAATCTGAGAGCTGATAAAACGGTAAATTCAACAAAAAACCAGAAGGCCAAGACTGTGAAGAGTGTGTGGCGTAAAGGGGATACGGTTTCAACTGTGCAGAAGGTTGTGAAGGAAGTACCTAAGCCGGGTAGTAACCAGAATGGAAGGGATGAATCTCAAATTGGGGGAGGGGAGAAGGTACTAGCATCTCAATCTCGCCCTCCTCAGCTTCCTCCAAAACCTCAACCGAAGTTGCTAACTAGACCTTCTATAGCTCCCCCAGCTCCACCACCCGTGAAAAAGCCTGTTGTCTTGAAGGACACTGGGGCAACTGACAAACCGGTTAAAACTAAAGAAAGGAAGGGACCCATCTTGATTGACAAATTTGCTTCCAAGAAACCAGTTGTTGATCCTGTAATTGCTCAAGCTGTTCTTGCCCCTCCAAAACCAGGGAAGGCCCCTCCGCCAGGAAAGTTTAAAGACGATTACCGGAAGAAAGGTGCTCCGGCTGGGGGTGGAGCAAGAAGACGAAAACTCAACGATGCCATTCCTGATGATGACACATCAGAATTGAAGGGCTCTATTCCCGGGGCTGCAAGGAAAGGAAGGAAGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTCCAAGCTGCCAGAGATGCAGCTCCTGTCAAAGCAGAAATTCTCGAGGTTAGTGATAAAGGTATGCTGGTGGAGGAGTTGGCCTACAACTTGGCAATCGGTGAAGGTGAAATCCTCGGTTCTCTATACTCCCGGGGGATTAAACCAGATGGGGTACAAACTCTGGACAAAGATATGGTGAAGATGATTTGTAAAGAATATGATGTGGAAGTCATAGATGCCGACCCTGTCAAAGTTGAAGCATTGGCAAAGAAAAGGGAAATCCTTGATGAAGGTGACCTTGACAAACTCAAAGATAGACCTCCGGTCATTACTATCATGGGCCATGTAGATCATGGCAAAACAACACTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGTGCTTATAGAGTGCAAGTACCTTTTGATGGCAAGGAGTTGCCTTGCGTTTTCCTTGATACTCCTGGGCATGAGGCATTTGGGGCAATGAGGGCTCGCGGAGCAAGTGTAACAGATATTGCTATCATTGTTGTGGCTGCCGATGATGGTATTCGTCCTCAAACAAACGAAGCAATAGCTCACGCCAAAGCAGCAGGAGTACCCATAATCATTGCGATAAACAAGATAGATAAAAATGGAGCAAATCCAGACCGAGTTATGCAAGAGCTTTCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGTGATGTCCCAATGGTCCAGATAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTCTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCTAATCCTAATAGAAGTGCAAAGGGTACAGTCATTGAGGCAGGTCTAGATAAATCAAAAGGACCATTTGCTAGTTTTATCGTGCAGAATGGCTCCCTTAAAAGGGGAGATATAGTGGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTTGATTTAGCTACGCCTTCTATGCCTGTACAGGTTATTGGATTGAATAATGTTCCACATGCTGGTGATGAATTTGAGGTTGTCGAATCCCTTGATACTGCACGTGAAAGGGCGGAGTCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCCTCCTTAGCTTCTGCAGTTTCATCGGGAAAGCTATCTGGACTAGACTTGCACCAACTAAATATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTCAGACAAGCGCTGCAGGTGCTACCACAAGATAATGTCACGTTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAACACAAGTGATGTTGACCTCGCAACCGCAAGCAAAGCTATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCGGAGAATAAACTTGTTGAGATTAGATTATACAGAGTTATTTACGAATTAATTGACGATGTGCGAAATGCAATGGAAGGACTCTTGGATCTTGTTGAGGAACAAATACCAATTGGCTCAGCAGAAGTACGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCGGGATGCATGGTTACAGAGGGAAAGATGACAAAAGACTGTGGTATTCGTGTCATTCGGAAGGGAAAAGTAATTCATGTTGGTGTCCTTGATTCTTTGAAACGAGTGAAGGAAATGGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGGATTAGAAGATTACAATGATTGGGAAGAGGGTGACCGTGTTGAAGCCTTCAATAAAGTTCAGAAGAAGCGAACTCTCGAAGAGGCCTCGGCATCAATGGCAGCTGCTGTGGAAGGAGTAGGAGCTTGA 3096 0.4477 MFFSIFTHKVSIFKPECNMLILVGNVQGAMSSLASPVNLGNLMCVSSSRRSHSSVRRVSFSRGSSKGKKNWHCVSLSMCRCSVTTTDFVADQGNSVSLDSNSSRESSNKGGDGGADFVLKPPPKPVLKSLGGKGNAILGVNSRNSEVGGDVEERNKVIESLGEVLEKAEKLGKSNHKLDDAKRNNGPVNKPVLSNVNANLRADKTVNSTKNQKAKTVKSVWRKGDTVSTVQKVVKEVPKPGSNQNGRDESQIGGGEKVLASQSRPPQLPPKPQPKLLTRPSIAPPAPPPVKKPVVLKDTGATDKPVKTKERKGPILIDKFASKKPVVDPVIAQAVLAPPKPGKAPPPGKFKDDYRKKGAPAGGGARRRKLNDAIPDDDTSELKGSIPGAARKGRKWSKASRKAARLQAARDAAPVKAEILEVSDKGMLVEELAYNLAIGEGEILGSLYSRGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVEALAKKREILDEGDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYRVQVPFDGKELPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKNGANPDRVMQELSSIGLMPEDWGGDVPMVQISALKGENVDDLLETVMLVAELQELKANPNRSAKGTVIEAGLDKSKGPFASFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVDLATPSMPVQVIGLNNVPHAGDEFEVVESLDTARERAESRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLEATGDVNTSDVDLATASKAIIFGFNVKAPGSVKSYAENKLVEIRLYRVIYELIDDVRNAMEGLLDLVEEQIPIGSAEVRATFSSGSGRVAGCMVTEGKMTKDCGIRVIRKGKVIHVGVLDSLKRVKEMVKEVNAGLECGLGLEDYNDWEEGDRVEAFNKVQKKRTLEEASASMAAAVEGVGA* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0218 1031 MobiDBLite consensus disorder prediction 346 360 - -
Lan9g0218 1031 SUPERFAMILY Translation proteins 680 764 IPR009000 -
Lan9g0218 1031 TIGRFAM small_GTP: small GTP-binding protein domain 506 667 IPR005225 GO:0005525
Lan9g0218 1031 Coils Coil 763 790 - -
Lan9g0218 1031 CDD IF2_eIF5B 507 673 - -
Lan9g0218 1031 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 811 923 IPR036925 -
Lan9g0218 1031 MobiDBLite consensus disorder prediction 265 292 - -
Lan9g0218 1031 Pfam Translation-initiation factor 2 812 905 IPR023115 -
Lan9g0218 1031 MobiDBLite consensus disorder prediction 337 398 - -
Lan9g0218 1031 CDD IF2_mtIF2_II 684 778 IPR044145 -
Lan9g0218 1031 Gene3D Translation factors 917 1014 - -
Lan9g0218 1031 SUPERFAMILY Translation proteins 920 1013 IPR009000 -
Lan9g0218 1031 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 59 1023 - -
Lan9g0218 1031 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 59 1023 IPR015760 -
Lan9g0218 1031 Gene3D Translation factors 680 796 - -
Lan9g0218 1031 MobiDBLite consensus disorder prediction 94 109 - -
Lan9g0218 1031 PRINTS GTP-binding elongation factor signature 508 521 IPR000795 GO:0003924|GO:0005525
Lan9g0218 1031 PRINTS GTP-binding elongation factor signature 560 570 IPR000795 GO:0003924|GO:0005525
Lan9g0218 1031 PRINTS GTP-binding elongation factor signature 576 587 IPR000795 GO:0003924|GO:0005525
Lan9g0218 1031 PRINTS GTP-binding elongation factor signature 612 621 IPR000795 GO:0003924|GO:0005525
Lan9g0218 1031 CDD mtIF2_IVc 923 1005 - -
Lan9g0218 1031 Pfam Elongation factor Tu GTP binding domain 509 669 IPR000795 GO:0003924|GO:0005525
Lan9g0218 1031 ProSitePatterns Initiation factor 2 signature. 966 988 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan9g0218 1031 Hamap Translation initiation factor IF-2 [infB]. 25 1013 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan9g0218 1031 Gene3D - 812 915 IPR036925 -
Lan9g0218 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 680 IPR027417 -
Lan9g0218 1031 TIGRFAM IF-2: translation initiation factor IF-2 425 1015 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lan9g0218 1031 Gene3D - 501 679 IPR027417 -
Lan9g0218 1031 MobiDBLite consensus disorder prediction 94 123 - -
Lan9g0218 1031 MobiDBLite consensus disorder prediction 233 311 - -
Lan9g0218 1031 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 504 677 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0218 Lan-Chr9 2747707 2755813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0218 505 719 Eukaryotic Initiation Factors Gene Family AT1G76810 34.601 2.93e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0218 K02519 - gmx:100818840 1459.51