Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0215 ATGGCCGTGATCATCACTCCTGAAACTGTTGAACGAGCCATTGATTCTCTTCTCAAATGGAGAAATTCTCAACCCCAGACCCAAAAATCAAAACTTTTGGACCAAGATGACGAATTCATCTACCTTACCCTAACCCTTAAGAAGGTCCCTCCAAAGGGTCGCGTTAACCCACACAAGGTCCCTCTCCCACATTCCCTTACTTCTGAATTCTCTGAAAGATGTTTAATTATTGATGACAGACCCAAATCAAATCTTACTAAAGCTGATGCTGAGAAGAAGATTAAATCGGAGAGTATTCCGATTTCTGAGGTTTTGAAGTTATCGAAATTGACTTCGGATTATCGCGCATTCGATGCGAAGCGAAAGTTGTGTGATTCTTATGATATGTTTTTCGCTGATAAGAGGATTGTGCCATTGCTAGCTAGGTTGTTGGGGAAGCATTTTTTGAAGAAGAAGAAGGTTCCTCTGCCGTTGGATTTGCAGAAGAAGAATTGGAAAGAGCAGGTTGAGAAGGCGTGTTCATCGGGGCTTTTGACGCTTAGGAGTGGGACTTGTAGTGTTGTTAGGGTTGCTAAGTTGAGTATGGAGAGGGACGAGATTGTGGAGAATGTGGTTGTGGCGATTGGTGGGATTGTCGAGATTATTCCGAAGAAATGGGAGAATGTGAGGTCTTTTCATGTTAAGTTGTTGGAGTCGCTTGCACTACCGGTATTTCAGGCTGTTCCGGATATTAAGTTGAGGATTGATGGGAGTAAGGCTGAGGAGGAGGAAGATGAGAAGAAGGAGGAGGAAGATGGTGGAGAGGTTCATGATCAGAAAAAGGGGAAGAAGAAGAAGAAGAAGGGGAAGATTCATCAAGTTAAATACATGGACGATAAAGTTGGCGAGGATGAGGATCTTGTTGTAGAAGATAAGCCAGGTAGTGATGATGCTGGTGATTCGGACAATGATGAAAAGGGGAGTGGAGAATTGGTAAAGAAGAAGAGAAAGAAAGGAGTTAAATTGGAAAATGGAGCTCTAGGTGAATTGAGCAGTGCCAAGAAGAAATTGAAGAAATCTGCCAAGGAAAGTGGCAAGAGGAAGAAGAAAGACGAGAAGGAAAATTTGATCGAGCAGTAA 1119 0.4281 MAVIITPETVERAIDSLLKWRNSQPQTQKSKLLDQDDEFIYLTLTLKKVPPKGRVNPHKVPLPHSLTSEFSERCLIIDDRPKSNLTKADAEKKIKSESIPISEVLKLSKLTSDYRAFDAKRKLCDSYDMFFADKRIVPLLARLLGKHFLKKKKVPLPLDLQKKNWKEQVEKACSSGLLTLRSGTCSVVRVAKLSMERDEIVENVVVAIGGIVEIIPKKWENVRSFHVKLLESLALPVFQAVPDIKLRIDGSKAEEEEDEKKEEEDGGEVHDQKKGKKKKKKGKIHQVKYMDDKVGEDEDLVVEDKPGSDDAGDSDNDEKGSGELVKKKRKKGVKLENGALGELSSAKKKLKKSAKESGKRKKKDEKENLIEQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0215 372 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 297 - -
Lan9g0215 372 MobiDBLite consensus disorder prediction 358 372 - -
Lan9g0215 372 CDD Ribosomal_L1 10 237 IPR028364 -
Lan9g0215 372 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 6 297 - -
Lan9g0215 372 SUPERFAMILY Ribosomal protein L1 31 238 IPR023674 -
Lan9g0215 372 Pfam Ribosomal protein L1p/L10e family 30 232 IPR028364 -
Lan9g0215 372 Gene3D - 83 175 IPR016095 -
Lan9g0215 372 MobiDBLite consensus disorder prediction 251 372 - -
Lan9g0215 372 MobiDBLite consensus disorder prediction 285 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0215 Lan-Chr9 2713030 2716018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0215 126 228 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 5.38e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0215 K14775 - mnt:21404260 380.178