Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0208 ATGGGTGTTAATGAAGATTTCATGAAGAATGATGAGTATGTGGAACACGAATTTCCACTTCCAGGGTTTCGGTTTCATCCCACAGATGAAGAACTTGTTAGTTTCTATCTTCTTAGGAAGGTTGAAGAGAAACCTATTAGTATGGAACTTATCAAGGAGATTAATATCTACAAACATGATCCTTGGGATCTTCCAAAAGCTAGTGGTAATGGAGGAGAAAAGGAAGGGTACTTCTATTGTCAAAGAGGGAGGAAGTATAGGAACAGCGTAAGGCCCAACAGGGTCACAGGCTCGGGGTTTTGGAAAGCAACAGGAATAGATAAGTCAGTGTATTCACGCGGAGGAGAAGGCAATGACTGCATTGGACTCAAGAAAACTCTTGTTTACTATTGTGGCAGTGCAGGCAGAGGAAGCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCCTCTAATCATAGCGCCATCATAAAGATTCCCAATACCAAGAATAATGCAGATATTGCCCAAGAAGCTGAAATTTGGACACTGTGTAGGATTTTTAAAAGAAATGTGTCACAAAGAAAGAACATGACAGACATAAGAACACATTCAGCTTCTAAGCGTCAAAACAATATTAACATAAGCATTAGAAAGAGCACTGAGGAATCTACTAACACTAATGAAGAAGCATATATCAATTTTGGTGCAAATCTTGGGCATTATCAGAATGAGAAGAAACATGTTATAAACTATCCTAGGAATCTGTTTAATGTAGGTCAGTTAAGCTCTTCGGTGGCACAACAATCTCTACTAACTGAACCATCTTCTAACTTCTGGATTAACCTTGCTGTGACTAATGAGTTATTTACATCTGAGAATTGGGATGAGCTTGGATCTGTTGTGAAGTTTTCTGTTGATTCACCTAGCTTGTAA 915 0.388 MGVNEDFMKNDEYVEHEFPLPGFRFHPTDEELVSFYLLRKVEEKPISMELIKEINIYKHDPWDLPKASGNGGEKEGYFYCQRGRKYRNSVRPNRVTGSGFWKATGIDKSVYSRGGEGNDCIGLKKTLVYYCGSAGRGSKTDWMMHEFRLPSNHSAIIKIPNTKNNADIAQEAEIWTLCRIFKRNVSQRKNMTDIRTHSASKRQNNINISIRKSTEESTNTNEEAYINFGANLGHYQNEKKHVINYPRNLFNVGQLSSSVAQQSLLTEPSSNFWINLAVTNELFTSENWDELGSVVKFSVDSPSL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0208 304 Gene3D NAC domain 28 187 IPR036093 GO:0003677|GO:0006355
Lan9g0208 304 PANTHER TRANSCRIPTION FACTOR JUNGBRUNNEN 1-LIKE 9 300 - -
Lan9g0208 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 300 - -
Lan9g0208 304 ProSiteProfiles NAC domain profile. 19 183 IPR003441 GO:0003677|GO:0006355
Lan9g0208 304 Pfam No apical meristem (NAM) protein 21 149 IPR003441 GO:0003677|GO:0006355
Lan9g0208 304 SUPERFAMILY NAC domain 14 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0208 Lan-Chr9 2546154 2549497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0208 20 183 NAC Transcription Factor Family AT5G39820 59.770 1.65e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan9g0208 NAM 4.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0208 - - lang:109334083 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0084 19 671195 673041 Lan9g0208 9 2546154 2549497 LSH