Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan9g0199 | ATGGAAATTGTCCATTCCACAAAATTGGCTCTGCCATTTCAAAACCAAAATAAAGCAGACCCAACCAAAATAAAACTACATCTTCACAATAATATTTCTTCATATAAGCAACTATTTTGTACACGAGCGGTCCCAGCCTACACAGCCCAAAGCACAAAAAGGACCGGTTGGGCTCCTCATATGGCTTCTTCCATAGTTGGTACAAGAGCTACATACTCGACAAAATCTGCATCCACAAATGAACCAGTTGTTTCTGTGGATTGGCTTTATGAGAACTTGAAGTATCCTGATATTAAGGTGCTGGATGCATCCTGGTACATGCCGGATGACCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGACGTAGATGGAATTTCAGATCGATCTACAAATTTACCACACATGCTGCCATCAGAAGAAGCTTTTGCTGCTGCTGTTTCAGCTCTTGGTATACAGAATAAAGATGACTTGGTTGTTTATGATGGCAAAGGACTATTTAGTGCTGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGTCATAACAGAGTTTGGGTATTAGATGGTGGCCTGCCAAGATGGCGTGCATCGGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCAACTGAGGCAATCGAGAAAACATATCAGGGACTATCAGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACACCTTGTTTGGACCCTCAATCAGGTAAAGAGAAACATTGAGGAAAAAAGACACCAACATATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGCACCGGAGCCCCGAAAGGGAATAAGAAGTGGCCATGTACCTGGCAGCAAATGTATTCCTTTTGGCCAGTTGTTAGATGGTGATTCTCATACACTATTACCGGAAGATGAGCTAAAGAAGCGATTTGATCAAGAAGGCATCTCTTTGGAAAGCCCAGTTGTGACTTCTTGTGGGACTGGAGTAACTGCTTGCATTCTTGCATTGGGTCTGCATCGTCTTGGAAAGTCTGATGTTGCAGTTTATGATGGTTCTTGGACTGAATGGGGAGCACAATCTGATACACCTGTGGAAACTTCAGAAACTTAA | 1146 | 0.4302 | MEIVHSTKLALPFQNQNKADPTKIKLHLHNNISSYKQLFCTRAVPAYTAQSTKRTGWAPHMASSIVGTRATYSTKSASTNEPVVSVDWLYENLKYPDIKVLDASWYMPDDQRNPIQEYQVAHIPGALFFDVDGISDRSTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGLFSAARVWWMFRVFGHNRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKTYQGLSVGPITFQTKFQPHLVWTLNQVKRNIEEKRHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFGQLLDGDSHTLLPEDELKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQSDTPVETSET* | 382 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan9g0199 | 381 | Coils | Coil | 254 | 274 | - | - | |
| Lan9g0199 | 381 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 255 | 379 | IPR036873 | - | |
| Lan9g0199 | 381 | CDD | TST_Repeat_2 | 253 | 370 | - | - | |
| Lan9g0199 | 381 | ProSiteProfiles | Rhodanese domain profile. | 94 | 211 | IPR001763 | - | |
| Lan9g0199 | 381 | PANTHER | THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE | 64 | 379 | - | - | |
| Lan9g0199 | 381 | MobiDBLite | consensus disorder prediction | 266 | 285 | - | - | |
| Lan9g0199 | 381 | ProSiteProfiles | Rhodanese domain profile. | 262 | 377 | IPR001763 | - | |
| Lan9g0199 | 381 | MobiDBLite | consensus disorder prediction | 266 | 294 | - | - | |
| Lan9g0199 | 381 | PANTHER | THIOSULFATE SULFERTANSFERASE | 64 | 379 | IPR045078 | GO:0016783 | |
| Lan9g0199 | 381 | CDD | TST_Repeat_1 | 83 | 206 | - | - | |
| Lan9g0199 | 381 | SMART | rhod_4 | 252 | 374 | IPR001763 | - | |
| Lan9g0199 | 381 | SMART | rhod_4 | 84 | 208 | IPR001763 | - | |
| Lan9g0199 | 381 | ProSitePatterns | Rhodanese C-terminal signature. | 358 | 368 | IPR001307 | GO:0004792 | |
| Lan9g0199 | 381 | Pfam | Rhodanese-like domain | 254 | 370 | IPR001763 | - | |
| Lan9g0199 | 381 | Pfam | Rhodanese-like domain | 85 | 204 | IPR001763 | - | |
| Lan9g0199 | 381 | Gene3D | - | 75 | 218 | IPR036873 | - | |
| Lan9g0199 | 381 | Gene3D | - | 248 | 379 | IPR036873 | - | |
| Lan9g0199 | 381 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 81 | 213 | IPR036873 | - | |
| Lan9g0199 | 381 | ProSitePatterns | Rhodanese signature 1. | 118 | 129 | IPR001307 | GO:0004792 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan9g0199 | Lan-Chr9 | 2420723 | 2433847 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan9g0199 | 61 | 381 | Sulfurtransferasese or Rhodanese | AT1G79230 | 77.882 | 0.0 | 537 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan9g0199 | K01011 | - | gmx:100798053 | 617.461 |