Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0198 ATGGAACAATCAAGATTCCAAAGAACGCTCCCATTCAACAGCATGGAACCTGGAAATGAAAAGTTTCAGCCTGGATCACAGTCAGTAATGCAAGACCATCTCGATGCCATGCATGCTAGTAGAAGACTGCCTGACCTTGGTACATCAGAAGTTAAACCTGTACTTAATTACTCCATGAACACAGGTGAGGAATTTGCCCTCGAATTTTTGAGAGATAGGGTGAATCTCAGGAAGCCTGTATTTTCTAATGTTGGCGATACCAATTATACAACGGGTTATATGGATCTTAAAGGCATTTTAGGCATCGGTCATCCAGGATCCGAAACTGGATCAGACATTTCTGTGCTCTCAATGGTTGATAAATATCCAAAAGAGTATGATAGAATGAATGCACCCTTACATGGCGACAGAGGCAATTATGGGTCAGTTCGATCAATACCAGAATCTTCATTGGATCATGACAATAGACAATATGTGCATGGGTATGGCTCTTCCCGAGGTTATGATAGCTTATCAACAATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGGATATTACCACGACCCTGTGATGGAAAGCTCAGGTATGTTGGAGGCCAAACACGTATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAATTCATGCAGAAAGCATTATTGATCTATAATGAGGTTCATGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTATCATCTGACGAGGATTTACAGAATATGATGGAGGAATGCAATCCTCTAGAAGATAGAGAAGGATCACAAAAGCTTCGGATATTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAGTTCGGTCTTGGCAGCGTCGGTGATGATTCTGAAATCCAGTATGTTGTTGCCGTTAATGGCATGGACTTGGGGTCAAGGAAAAACTCAACCATATTTGGTGTCAGTTCTTCAGCAAATGATATCCATGAGTTAGACAGGCAAAATATTGAGAGGGAGACAAGTAGAGTTGCTGTGGAATCTATAGGTGTTAGCAATGCTCCCCTGACTAACAAATTCGACTCATCAATGAATACTCAGTCTTTGCAACCAGTGCTACCAACTTCCTCAAATTCTTATGAAACCCATCCACTGTTTTACGGTGACCAAATGATGCGCCATGGGGATCCTAGTGGTCAATATCTTATTAATCATGGCTTTAATCCTTCTCATGTACCTGTTATTGGAGAGATTCCTTATACAATGGCTCCTCATATGCCGATTAATCAACAAGGGATTTTACATGAGGGCTATCCACATTGTGGTTTACAAATGCAAAATTCAGAAATACCGGCAATGCTGGCTAAAAAGACGGAGGATAGTTCAATTCAACAAGGAGGTGACCCTGGGAAAGTTGTATCCTTCCAAACATCGTCCCCAGCTCCTGCACAACTGTTTGATGATTACTATAAAAGTAATTTCCCCGAGGCATCAGTTGTTATTACTGTGCCAGAGGGGCATTCAATGCCTCCAACAAAAAAGAACCAGCTTCCGGATTATGAAGAAGCTTCTTCCACATCTAGCAGTGCATTAGGTCCTGCTTATGTTGATTCCCAATCCAATGCAGTTGACTTGAGTTCTCTTCACCCTCCTCCTCTTCCCAAAAGGGTTTACTATTCAGAAAGAATTCCCAGGGAGCAAGTAGAGTTTTTGAATCGATCCTCGAAGTCAGATGATGCACACAATTCGCAGATTCATGTTTCAGATTTAATTTCTGATGTCAACCCGCCGGATTCAGTTAGAGAATTTGGTGACAACTTGCAAGATGGAAATATGTCTAATCTAGCTGAGGAATCGAGCATCACAGCCAAGCCCTTGCATGCAGATGGCTATGCCATTGAGAATGGGGCTGTCAAAAATCAGATACACCAACAGTTGCCTGATGCTAGCAATCCGATCAAGTCAAAGCCTATTGAGCATTTGAATCCTGAGGCACGCAGTAACGATGTCATAAATAAGGACAATGCTGTTAGTTTGGAAACTGAAATTTATAGTAAAAATAATCATAATAAACCACTGCTTGATGAGTCAAAAGACGGAAAATCCGAGTTTCCTACTTCACACCAGGTTCCCTCTGTTAAGCACCATGATGATCCAGCATGCAATCTTCCAGAGATTGATTGGGGTGATACTGCTGCAATGGAATCTAATGACTATTATAGTGTACAAGCACTACCTGTTACTTTAAATGGGAACACAACTATGAAAGATGATTCTCAAGATTTTCCTTCAAATGTTGTTTCCAAAGAAGCACAGGGTGACATTCTTATTGATATCAATGATCGGTTTCCGCGTCAATTGCTCAGTGATATATTCTCTAAAGCAATACTTGAAGAAGACCCCTCTAGCCTTCATCCATTAACCTCAGATGGAGTAGGTCTAAGTGTAAACATGGAAAATCATGACCCTAAACGATGGTCGTATTTTCAGAAATTGGCCCAAGGGCTCGATAATGTGTCTCTTATTGACCAGGATCATCCTGGTTTTTCACCCACACTAAGAGAAGAGGACAATAGAACTCAACATGTCACACCTCTAACAACTGATGAAGAAAATCAGAAAGGTTTGTATGGAAGGAATGGGACCGAAACCACTGCTCTGAAGTCAAACTATGATCAATCCGAAGTTAAGGACACTGAAAGAATGCAGTTTGATGCTATGATAGAAAATGTAAGAGCACATGAGTCAGAATATGAGGATGGGAATTTCGAAACAAGAAATAATGGTGTACCTCCAGTTGATCCTTCCTTAGGAGAATTTGATATGAGTACCTTGCAGGTCATTATGAATGAAGATCTCGAAGAGCTGAGGGAACTGGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAATGGCGAGGAACGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTATAGAATTCTGGCGGGAAGCAGATATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTGCAGAATGGACCGGGAGGAACAATGGCCACTGTTACTGAATTCATGGTTGATGGTTCTCTTAGGCACGTTTTACTTCGCAAGGACAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGGATGGAATATTTACACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTAAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGGAATACCTTGGTTTCTGGCGGTGTGCGGGGGACTTTGCCATGGATGGCACCAGAACTGCTAAATGGTAGCAGCAATAAGGTCTCGGAGAAGGTTGATGTGTTCTCTTTTGGCATTGTATTGTGGGAGATTCTCACTGGTGAGGAGCCCTATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAATAATACTTTAAGGCCAACAATCCCAAGTTATTGTGATCATGAATGGAGAACACTAATGGAGGAATGTTGGGCACCCAATCCTTCAGCTAGGCCTTCCTTCACCGAGATTGCCAGTCGGTTGCGCGTAATGTCTGCTGCGGCTCTCCCAACCAAAACACAGGGTCACAAGGCTTCTAAGTGA 3693 0.4181 MEQSRFQRTLPFNSMEPGNEKFQPGSQSVMQDHLDAMHASRRLPDLGTSEVKPVLNYSMNTGEEFALEFLRDRVNLRKPVFSNVGDTNYTTGYMDLKGILGIGHPGSETGSDISVLSMVDKYPKEYDRMNAPLHGDRGNYGSVRSIPESSLDHDNRQYVHGYGSSRGYDSLSTMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQEFMQKALLIYNEVHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNPLEDREGSQKLRIFLFSMSDLEDAQFGLGSVGDDSEIQYVVAVNGMDLGSRKNSTIFGVSSSANDIHELDRQNIERETSRVAVESIGVSNAPLTNKFDSSMNTQSLQPVLPTSSNSYETHPLFYGDQMMRHGDPSGQYLINHGFNPSHVPVIGEIPYTMAPHMPINQQGILHEGYPHCGLQMQNSEIPAMLAKKTEDSSIQQGGDPGKVVSFQTSSPAPAQLFDDYYKSNFPEASVVITVPEGHSMPPTKKNQLPDYEEASSTSSSALGPAYVDSQSNAVDLSSLHPPPLPKRVYYSERIPREQVEFLNRSSKSDDAHNSQIHVSDLISDVNPPDSVREFGDNLQDGNMSNLAEESSITAKPLHADGYAIENGAVKNQIHQQLPDASNPIKSKPIEHLNPEARSNDVINKDNAVSLETEIYSKNNHNKPLLDESKDGKSEFPTSHQVPSVKHHDDPACNLPEIDWGDTAAMESNDYYSVQALPVTLNGNTTMKDDSQDFPSNVVSKEAQGDILIDINDRFPRQLLSDIFSKAILEEDPSSLHPLTSDGVGLSVNMENHDPKRWSYFQKLAQGLDNVSLIDQDHPGFSPTLREEDNRTQHVTPLTTDEENQKGLYGRNGTETTALKSNYDQSEVKDTERMQFDAMIENVRAHESEYEDGNFETRNNGVPPVDPSLGEFDMSTLQVIMNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQNGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDHEWRTLMEECWAPNPSARPSFTEIASRLRVMSAAALPTKTQGHKASK* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0198 1230 SUPERFAMILY Protein kinase-like (PK-like) 937 1210 IPR011009 -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 513 529 - -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 682 714 - -
Lan9g0198 1230 PANTHER SERINE-THREONINE PROTEIN KINASE 89 1230 - -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 1 27 - -
Lan9g0198 1230 PRINTS Tyrosine kinase catalytic domain signature 1030 1043 IPR001245 GO:0004672|GO:0006468
Lan9g0198 1230 PRINTS Tyrosine kinase catalytic domain signature 1067 1085 IPR001245 GO:0004672|GO:0006468
Lan9g0198 1230 PRINTS Tyrosine kinase catalytic domain signature 1138 1160 IPR001245 GO:0004672|GO:0006468
Lan9g0198 1230 PRINTS Tyrosine kinase catalytic domain signature 1182 1204 IPR001245 GO:0004672|GO:0006468
Lan9g0198 1230 SMART PB1_new 189 276 IPR000270 GO:0005515
Lan9g0198 1230 ProSitePatterns Protein kinases ATP-binding region signature. 954 979 IPR017441 GO:0005524
Lan9g0198 1230 SMART serkin_6 948 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0198 1230 ProSiteProfiles Protein kinase domain profile. 948 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0198 1230 MobiDBLite consensus disorder prediction 500 529 - -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 684 698 - -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 643 664 - -
Lan9g0198 1230 Gene3D Phosphorylase Kinase; domain 1 941 1035 - -
Lan9g0198 1230 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 89 1230 - -
Lan9g0198 1230 Pfam Protein tyrosine and serine/threonine kinase 949 1211 IPR001245 GO:0004672|GO:0006468
Lan9g0198 1230 CDD PB1_UP2 178 274 - -
Lan9g0198 1230 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Lan9g0198 1230 Gene3D - 193 276 - -
Lan9g0198 1230 Gene3D Transferase(Phosphotransferase) domain 1 1036 1230 - -
Lan9g0198 1230 MobiDBLite consensus disorder prediction 567 607 - -
Lan9g0198 1230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1073 1085 IPR008271 GO:0004672|GO:0006468
Lan9g0198 1230 CDD STKc_MAP3K-like 954 1211 - -
Lan9g0198 1230 SUPERFAMILY CAD & PB1 domains 191 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0198 Lan-Chr9 2384827 2393598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0198 49 583 MAP Kinase Kinase Kinase AT1G16270 40.909 1.25e-100 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan9g0198 PK_Tyr_Ser-Thr 2.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0198 - - gmx:100799639 1894.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0074 19 568294 574941 Lan9g0198 9 2384827 2393598 LSH
Lan5g0771 5 19597495 19608363 Lan9g0198 9 2384827 2393598 LSH