Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0182 ATGACATCTTCAAAGCCTGTCAAGATGCCTGACTTACCTCAGATGGACCTCAATTCAGGAGAAAATCTTAAGATAAGTCATAGTAGTGGCCATAATAGTTGTACAAATTCAAGAACAAATTCACCAACTCACCCAACAAAGTTGAATGAAGTAGCAAAAGATGCTAGCACAAATGAAATTTCAACAAGTGAATTTGGAAGTGTACATTTAGACCAAGTTTCTAAAACTGATGCAAAGTTGACAACTAAATCTAATAGACCTCAAAAATTAGCACCATCAACCAGAAACATTTCTGATTTCTCTACTCAAAGTCCAAGAACAAAGAAGACTTCAAATTTTGACCCTGCAATTACCACACCAGGACTTCCAACAGGAGTTGCTAAGGGAATGTCCAACCATTCAAAGAACACCATTCAAGTGCCCGGAAGTGGCGCTAGCTCTCGCAGCGACAGTTTAGAGAGCACCAGCGCGACCATTAGGCCTCACACCGGTGGCGATGTAAGGTGGGATGCTATTAACTTGGCTGCAAGGGGTGGTACTCTGAATCTTAAAGACTTCAGGCTTCTCAAGCGGATCGGATACGGAGACATCGGGAGTGTATATCTTGTCGAACTAAAAGGAACTAAGGCTCATTTTGCTATGAAAGTAATGGATAAAGCAGCTCTTATCAGCAGAAATAAGCTTCTGAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAGTTCTGTAGTGGAGGTGATCTTCATTCTCTTAGACAGAAACAACCTAATAAGTGCTTCACTGAAGAAGCTGCGAGGTTCTATGCTTCAGAGGTTTTGTTAGCTCTTGAGTACCTGCATATGCTTGGCATTGTATACAGAGACTTGAAGCCTGAGAATCTTCTAGTCAGAGATGAAGGCCACATCATGCTCTCAGATTTTGACTTATCGCTTCGCTGTTCGGTTAATCCTACCCTTGTAAAGTCTTCATCAGCCAATGCAAGCAATGGAAGTAGTGACTCTGGAGCCATGTTAGGCGAAGAACAAGCAATACAAACTTGTGCATCTTCATCAAACTTTTTCCCAAGAATTTTGCCTTCAAAGAAGAACCGTAAGGCGAAATCAGATTTTGGCCTAATGGTTGGTGGAGTTAGACTTCCTGAACTGATGGCAGAGCCAACAAATGTTCGGTCGATGTCATTCGTAGGCACACATGAATATCTCGCTCCCGAGATAATCAAAGGAGAGGGCCATGGTAGTGCAGTAGATTGGTGGACTTATGGTATATTCTTGTATGAACTTTTGCATGGAACAACCCCTTTTAAAGGTGCTGGATATAAGGCCACACTTTTCAATGTTGTTGGACAACCATTAAGGTTCCCCGAAACTCCTCAAGTCAGCGCCGTGGCTCGCGATCTTATACGAGGATTGTTGGTCAAGGAACCTCAGAAAAGGATTGCATATAAAAGAGGTGCAACAGAAATAAAACAACACCCTTTTTTTGAGGGTGTGAATTGGGCTCTAGTTAGAAGTGCTACACCACCTCATATACCAGAAACTATAGACTTTTCCAAGTATGCTAGCAAAGACAAAGATTCAACAACACAAGCTGATAAGAAGATGGCAGATATTGCTAATGATAAGAATAGCAATAGTTCTAATGATTCTTCTTATGTAGATTTTGAGTATTTTTAG 1743 0.4108 MTSSKPVKMPDLPQMDLNSGENLKISHSSGHNSCTNSRTNSPTHPTKLNEVAKDASTNEISTSEFGSVHLDQVSKTDAKLTTKSNRPQKLAPSTRNISDFSTQSPRTKKTSNFDPAITTPGLPTGVAKGMSNHSKNTIQVPGSGASSRSDSLESTSATIRPHTGGDVRWDAINLAARGGTLNLKDFRLLKRIGYGDIGSVYLVELKGTKAHFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSANASNGSSDSGAMLGEEQAIQTCASSSNFFPRILPSKKNRKAKSDFGLMVGGVRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPETIDFSKYASKDKDSTTQADKKMADIANDKNSNSSNDSSYVDFEYF* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0182 580 MobiDBLite consensus disorder prediction 544 561 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 562 580 - -
Lan9g0182 580 Gene3D Phosphorylase Kinase; domain 1 178 271 - -
Lan9g0182 580 ProSiteProfiles Protein kinase domain profile. 186 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0182 580 SUPERFAMILY Protein kinase-like (PK-like) 183 549 IPR011009 -
Lan9g0182 580 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 41 580 - -
Lan9g0182 580 CDD STKc_phototropin_like 184 538 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 76 119 - -
Lan9g0182 580 PANTHER FLIPPASE KINASE 1-RELATED 41 580 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 1 48 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 131 159 - -
Lan9g0182 580 SMART serkin_6 186 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0182 580 Gene3D Transferase(Phosphotransferase) domain 1 272 534 - -
Lan9g0182 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Lan9g0182 580 Pfam Protein kinase domain 187 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0182 580 Pfam Protein kinase domain 404 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g0182 580 ProSiteProfiles AGC-kinase C-terminal domain profile. 518 580 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan9g0182 580 MobiDBLite consensus disorder prediction 76 118 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 19 48 - -
Lan9g0182 580 MobiDBLite consensus disorder prediction 544 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0182 Lan-Chr9 2143518 2146938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0182 152 580 AGC Kinase Gene Family AT1G79250 73.154 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan9g0182 Pkinase 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0182 - - gmx:100819001 843.958