Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0179 ATGATGCCAGGTAGTGGACAATTAACAGTTCCTCCAGGCTTCAGGTTCCACCCTACTGATGAAGAGCTTCTTTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATAAGAGAAGTAGATCTGAACAAACTTGAGCCTTGGGATCTCAAAGATAAATGTAGCATTGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAGTATCCGACCGGAACCCGAACAAATCGAGCAACAACAGTTGGTTTTTGGAAAGCAACGGGAAGAGACAAGGCCATTTACCATAGCAGTTCCAAGAGGATTGGGATGAGGAAAACCCTAGTGTTCTACACCGGTCGCGCTCCTCATGGCCACAAGACTGAGTGGATCATGCATGAGTATCGCCTTGATGAAGATGATGCTGAGGTTCAGGAAGATGGGTGGGTGGTCTGCAGGGTTTTCAAAAAGAAAAACCAAAACAGATGTTACCAACAAGAAATTGAAGAAGAGCACTTCACCAATATGAGAACAACTGGCCCTTCCCAAATTCTAGAGCCAAAACATCATCACATACAAGGACTATATGATTACAACAACTTTGATGGATCAATGCACCTTCCACAGCTATTCACTTCAGAAACAGCTATAGCACCAACTCCTTGCATGGCTTCATCCATGAATGCCATGGATATCCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACAACAACATCTGGCTGTGGACTTAATCTTATGCAACAACAACAACAACAACCAGGAGAGAGGTTCAATGGTGATTGGTCATTCTTGGACAAACTCCTTGCTTCCCATAATAGTAACCCTCCTACCCATCAAGCTGCTGCTGCTAGTTCAGTTCAGAAATTTCCATTTCATTACCTTGGCTGTGACACCCAGGATATTATGAAATTTTCTAAGTAG 948 0.4346 MMPGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCSIGSGPQNEWYFFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYHSSSKRIGMRKTLVFYTGRAPHGHKTEWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNQNRCYQQEIEEEHFTNMRTTGPSQILEPKHHHIQGLYDYNNFDGSMHLPQLFTSETAIAPTPCMASSMNAMDILECSQNLLRLTTTSGCGLNLMQQQQQQPGERFNGDWSFLDKLLASHNSNPPTHQAAAASSVQKFPFHYLGCDTQDIMKFSK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0179 315 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Lan9g0179 315 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 283 - -
Lan9g0179 315 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Lan9g0179 315 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 283 - -
Lan9g0179 315 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Lan9g0179 315 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0179 Lan-Chr9 2086975 2091469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0179 2 315 NAC Transcription Factor Family AT1G79580 51.958 2.36e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan9g0179 NAM 8.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0179 - - gmx:100789606 546.199