Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0178 ATGGGAACACCTGTGAACATCATTGTTGGATCACATGTTTGGATTGAGGATCATGAGATTGCATGGATTGATGGTGAGGTGACAGAAATCAATGGCAGAAATGCAAAAATCATTACTACAAATGGGAGAAAAGTTGTGGCAGAAATTTCAAGTATATATCCTAAAGATACAGATGCACCACCTGTAGGGGTTGATGATATGACCAAACTAGCATACCTTCATGAGCCAGGAGTCCTGTATAACCTTGCCTGTCGTTTTTCTCTCAAAGAGATATATACATATACAGGGAACATCTTAATTGCGGTTAATCCGTTTCAAAGATTGCCACACTTGTATGACATCGACATGATGCAGCAGTACAAAGGAGCAGAATTTGGAGAGTTGAGTCCTCACCTTTTTGCTGTTGCAGACACATGTTACAGGGCAATGATAAATGAAAATGGAGGTCAGTCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACAGAAACAACCAAAATGCTAATGAGATATCTAGCATTCATGGGGGGAAGATCTAATACAGAAGGAAGAACTGTAGAACAAAAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCCAGTCGTTTTGGTAAATTTGTTGAAATTCAATTCGACAAGAATTGGAAGATTTCTGGAGCTGCAATACGTACATATTTGCTCGAAAGGTCACGAGTTTGTCAGGCCTCTGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCTGCACCACCAGAGGATATCAAGAAGTACAAGTTAGGGGATCCAAGACAATTTCACTATCTTAATCAATCAAATTGTTATAAAGTATCAAATATGGATGATGCAAAAGAATATTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAATCTAGATGAGCAGGATGCTATCTTTCGTGTGGTTGCCGCAATCCTCCACCTCGGAAACATTAACTTCGTTAAAGGTAAAGAATTTGATTCTTCAAAATTAAAAGATGACAAATCACTCTTCCACCTTCGAACAGTTGCAGAGTTACTCATGTGTAATGAGAAATCACTACAAGACTCACTTTGTCAGCGTGTCATTGTTACTCCCGATGGTAACATTACAAAACTATTAGACCCGGATGCAGCTGCTTTGAGCCGAGATGCTTTGGCAAAGACTGTGTACTCCAAACTGTTTGATTGGATTGTGGACAAGATTAACAATTCAATAGGTCAAGATTCAAATGCAATAAGCATAATAGGAGTCCTTGACATTTATGGATTTGAAAGCTTCAAAATAAATAGTTTCGAGCAACTATGCATCAACCTAACAAATGAGAAGTTGCAACAACATTTCAATCAGCATGTATTCAAGATGGAGCAAGAAGTGTACACAAAGGAGGAAATAAATTGGAGTTACGTCGAATTTGTTGATAATCAGGACGTTCTTGATCTTATTGAGAAGAAACCTGGGGGCATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAGGCACACAAGCGCTTCAGGAAGCCAAAACTTGCACAAACAGATTTCACTATTAACCATTATGCTGGAGATGTCACATACCAAGCGGATTATTTTCTCGATAAAAACAAAGATTATGTTGTAGCAGAACATCAAGCTCTTTTATGGGCATCCAAGTGCAATTTTGTTGCCAATCTTTTCCCTCCTTTACATGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAATTACAATCTCTCATGGAAACACTGAGCACAACTGAACCACATTACATAAGATGTGTGAAACCAAATACAGTTTTGCAGCCAGGAATCTTTGAGAACAACAATGTCTTAAACCAGTTAAGATGTGGGGGAGTACTCGAGGCAATAAGGATTAGTTGTGCGGGATATCCAACAAAAAGAACATTTGAAGAGTTTCTAAATCGTTTTGGAATGGTAGCCCTTGATGTCCTCGACGGATCTGACGAGAAAAAGTCATCTATTGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATAGGAAAAACAAAGGTATTTCTCAGAGCCGGTCAGATGGCAGAGTTAGATGCACGACGAGCCGAAATCATATCTAAAGCCGCTAGGCGCTTACAGAGACAAATCATGACATATTTGACTAGAAAAGTGTTCATTACACAGAGAAAGGCCACAATTCATATCCAGAAAACTTGGAGAGCAAAACTTGCACGTAAACTCTACGAGCAAATGCGGAGGGAAGCAGCTTCTATCCAAATACAGAAACATGTGCGTGCACACAAAGAAAGAATGCACTATTCATCATTACAAGCCTCAACTATAGTTATTCAATCAGGGTTGAGAGCATTAGCAGCAAGAAATGAATATAGTTATAGAAGAAGAACAAAGGCTTCAATCAAAGTTCAGATGCAATGGAGAAGAGCCCTAGCTCTTCATTATTACAAACAACAGAAGAAAGCAACTCTTACACTTCAATGTCTTTGGAGGGCTAAAGTAGCAAAGAAAGAGCTCAGGAAGCTTAGGATGGCTGCAAGGGATGCCGGGGCACTTAAGGATGCAAAGGAGAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGACTTGATGTAGAAAAACAGATGAGGGTTGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAACTACAAAATGCTTTACTAGAAATGCAAGGTAAGCTAGATGAAGCCCATGCTGCAATTATACATGAGAAAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAGGTACTTGTTGAGGACAACACCAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAGTGTGAAGTACAAGAGCTAATGAAGAAGATTAAAGAATTCGAAGTAAAGTGCTCGGAAATAGAAAATGAAAATCAAGCAAGGCTGAAAGAAGCAGAAGAAGCACAACGCAAAGCAATACAACTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCTAACCTTGAGTCCGAGAATAAGGTTCTATGCCAGCAGGCTTCGGAAAAATCAAAGAATTTTGAAGAACTTTTTGAAGAGATCAAAGTATTGGAATCGAGTTTGTCGAACCTTGAGTCCGAGAATAAGGTTCTATGCCAGCAGGATTTGGAAAAATCAAAGAATTTTGAAGAACTTTTTGAAGAGATCAAAGTATTACAATCGAGTTTGTCAAACCTTGAGTCTGAGAATAAGGTTCTACGCCAGCAGGCTTTGGATGAATCAAAGAATGAAGAACTTTTTGAAGAGATCAAAGTCCTGAAGGACCAGATAGCAAATCTAGGAAAAGAGAATGAATTTCTACGGAGCCAGGCAGTGGCGGCGGCAGCAACTGCTGCTGAAGAGCAGAAAGTTCATCCAGAAAAAACAGCAACATACCAGGTCCAGGAAGTTGCTCTTTTAGAACAGATTGAACAGAGAGTTATTTCAGATAATATGACTGCACAAATCAAGAATTTGGAATATGGAAATCAATCACAGGAAGAACTCCATGGAAGAAAAGAACCTAGAGCACCTGTCTCCTTTCCTACAAAACAAAGATCATTCACAGAGAGGCAGCAGGAAAGTTATGATGCACTTATCAAGTGTCTCATGGAATACAAGCGATTCGAGAAAAACAGACCAGCAATTGCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGATAAGACACTTATATTTGATAAAATTATTCACACCATTCGATCATCTATAGAGAATCAAGCAGGAATCATTGATCTAGCATATTGGCTGTCAACAACTTCAACACTTCTGTTATATCTTCAATGCACTCTGAAGGCTAGCAATTGGACTAGGGAAGTCTCACGTAATCGAAACAACCATGCTACTCTTTTTGGAAAAATGACACAAGGCTTCCGTTCATCTTCAACGGGCATGGGGATTTCAAGTGGCTATAGTGGAATGGTGGACAAGTCAAATGAGCAATTTAAAGTGGAAGCCAAGTACCCAGCTATTCTCTTTAAGCAACATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTTTAAAGAAAGAGATTATACCGTTCCTAAATTTGTGTATTCAGGCACCAAGATCTCTAAGGACAAGATCAATAAGAGGGTCATCCAGAAACATTCATTCAAATATAGCAGCTAAACAACAAGCATTGCATATGCACTGGAAAAGCATTGTCAACAAGTTAGATCATGCCTTGAGTATATTGTCAGAAAACGTCGTCCCTTCAATCATAACAAGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTCCAGCTCTTTAATAGTTTGTTGCTTCGCCGTGAGTGCTGCTCCTTTAGCAATGGAGAATACTTGAAGGCAGGTTTGCATGAGTTGGAACTATGGTGTCTTAAGGCAACAGATAAGTTTGCTGGGTCATCATGGGATGAACTCAAATATATATGCCAAGCTGTGGATTTTCTGGTTTTACACCAAAAGGCTCAAATATCTTTGGAGGAGATCACAAATGAACTATGCACGGTGTTAAGTGTTCCGCAAATATATCGAATCGGAACCATTTTCTGGGATAACAAATATGGAGCACAAGGATTATCTCAAGAAGTCATTAGCAGAATGAGAGTCCTTATGACAGAAGACTCAATAAACATAACCACTAACTCATTCCTTCTAGAGGTGGATTCCAGCATATCATTCTTGATGGAGATGTTCCAGTCCATGAGTGAAATCGGCCTATCCGATATGGATGTGGATCCTCCCATAATTCTCAGCCAAAGGTCTGATTTCCAATTCTTGCTGCAACAAAAGGACAGTGGCTTTCAATGA 4974 0.391 MGTPVNIIVGSHVWIEDHEIAWIDGEVTEINGRNAKIITTNGRKVVAEISSIYPKDTDAPPVGVDDMTKLAYLHEPGVLYNLACRFSLKEIYTYTGNILIAVNPFQRLPHLYDIDMMQQYKGAEFGELSPHLFAVADTCYRAMINENGGQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQKVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQASDPERNYHCFYMLCAAPPEDIKKYKLGDPRQFHYLNQSNCYKVSNMDDAKEYLETRNAMDIVGINLDEQDAIFRVVAAILHLGNINFVKGKEFDSSKLKDDKSLFHLRTVAELLMCNEKSLQDSLCQRVIVTPDGNITKLLDPDAAALSRDALAKTVYSKLFDWIVDKINNSIGQDSNAISIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEVYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFRKPKLAQTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLWASKCNFVANLFPPLHEETSKQSKFSSIGSQFKQQLQSLMETLSTTEPHYIRCVKPNTVLQPGIFENNNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLNRFGMVALDVLDGSDEKKSSIAICDKMGLKGYQIGKTKVFLRAGQMAELDARRAEIISKAARRLQRQIMTYLTRKVFITQRKATIHIQKTWRAKLARKLYEQMRREAASIQIQKHVRAHKERMHYSSLQASTIVIQSGLRALAARNEYSYRRRTKASIKVQMQWRRALALHYYKQQKKATLTLQCLWRAKVAKKELRKLRMAARDAGALKDAKEKLEKRVEELTWRLDVEKQMRVDLEEAKGQEIAKLQNALLEMQGKLDEAHAAIIHEKEAAKIAIEQAPPVIKEVLVEDNTKLELLTNKNEELECEVQELMKKIKEFEVKCSEIENENQARLKEAEEAQRKAIQLQETIERLELSLSNLESENKVLCQQASEKSKNFEELFEEIKVLESSLSNLESENKVLCQQDLEKSKNFEELFEEIKVLQSSLSNLESENKVLRQQALDESKNEELFEEIKVLKDQIANLGKENEFLRSQAVAAAATAAEEQKVHPEKTATYQVQEVALLEQIEQRVISDNMTAQIKNLEYGNQSQEELHGRKEPRAPVSFPTKQRSFTERQQESYDALIKCLMEYKRFEKNRPAIACIVYKALLHWRSFEADKTLIFDKIIHTIRSSIENQAGIIDLAYWLSTTSTLLLYLQCTLKASNWTREVSRNRNNHATLFGKMTQGFRSSSTGMGISSGYSGMVDKSNEQFKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEIIPFLNLCIQAPRSLRTRSIRGSSRNIHSNIAAKQQALHMHWKSIVNKLDHALSILSENVVPSIITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDKFAGSSWDELKYICQAVDFLVLHQKAQISLEEITNELCTVLSVPQIYRIGTIFWDNKYGAQGLSQEVISRMRVLMTEDSINITTNSFLLEVDSSISFLMEMFQSMSEIGLSDMDVDPPIILSQRSDFQFLLQQKDSGFQ* 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0178 1657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 788 IPR027417 -
Lan9g0178 1657 Coils Coil 876 910 - -
Lan9g0178 1657 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Lan9g0178 1657 Pfam DIL domain 1471 1571 IPR002710 -
Lan9g0178 1657 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Lan9g0178 1657 Pfam Myosin N-terminal SH3-like domain 9 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 Gene3D Myosin VI head, motor domain, U50 subdomain 311 601 - -
Lan9g0178 1657 SMART DIL_2 1470 1577 IPR002710 -
Lan9g0178 1657 Gene3D - 667 729 - -
Lan9g0178 1657 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Lan9g0178 1657 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Lan9g0178 1657 Pfam IQ calmodulin-binding motif 855 874 IPR000048 GO:0005515
Lan9g0178 1657 CDD MYSc_Myo11 76 719 IPR036018 -
Lan9g0178 1657 ProSiteProfiles Dilute domain profile. 1281 1595 IPR002710 -
Lan9g0178 1657 Coils Coil 770 790 - -
Lan9g0178 1657 PANTHER MYOSIN-12 1054 1647 - -
Lan9g0178 1657 PANTHER MYOSIN-12 20 1050 - -
Lan9g0178 1657 Gene3D - 785 834 - -
Lan9g0178 1657 Gene3D - 734 784 - -
Lan9g0178 1657 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 Coils Coil 965 1083 - -
Lan9g0178 1657 PANTHER MYOSIN 1054 1647 - -
Lan9g0178 1657 PANTHER MYOSIN 20 1050 - -
Lan9g0178 1657 Coils Coil 922 942 - -
Lan9g0178 1657 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Lan9g0178 1657 ProSiteProfiles IQ motif profile. 782 809 IPR000048 GO:0005515
Lan9g0178 1657 Gene3D - 439 623 - -
Lan9g0178 1657 Coils Coil 1091 1152 - -
Lan9g0178 1657 SMART iq_5 829 851 IPR000048 GO:0005515
Lan9g0178 1657 SMART iq_5 781 803 IPR000048 GO:0005515
Lan9g0178 1657 SMART iq_5 852 874 IPR000048 GO:0005515
Lan9g0178 1657 SMART iq_5 756 778 IPR000048 GO:0005515
Lan9g0178 1657 SMART iq_5 804 826 IPR000048 GO:0005515
Lan9g0178 1657 CDD MyosinXI_CBD 1232 1618 IPR037975 GO:0007015
Lan9g0178 1657 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan9g0178 1657 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lan9g0178 1657 Gene3D - 252 310 - -
Lan9g0178 1657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 881 IPR027417 -
Lan9g0178 1657 MobiDBLite consensus disorder prediction 1206 1229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0178 Lan-Chr9 2056732 2071810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0178 116 1650 Myosins gene family AT2G31900 66.732 0.0 2061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0178 K10357 - gmx:100786418 2610.87